RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 ICAM1P05362 532 aa15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 KCNJ1P48048 391 aa15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 PEX3P56589 373 aa15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 CDR2Q01850 454 aa15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 SNRNP35Q16560 246 aaKnown RBP15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 TKFCQ3LXA3 575 aa15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ZNF568Q3ZCX4 644 aa15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 KRT39Q6A163 491 aa15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 MFSD5Q6N075 450 aa15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 CBWD2Q8IUF1 395 aa15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 FUKQ8N0W3 1084 aa15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 SLCO2A1Q92959 643 aa15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.22■□□□□ 0.032e-6■■■■□ 19.4
CDK5RAP3-237ENST00000585163 INTS9Q9NV88 658 aaKnown RBP15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 GOLGA8IPA6NC78 632 aa15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 GOLGA8JA6NMD2 632 aa15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ADSSP30520 456 aa15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 PTGER2P43116 358 aa15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 SPP2Q13103 211 aa15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 AUHQ13825 339 aaKnown RBP15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 KRT27Q7Z3Y8 459 aa15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ANKS4BQ8N8V4 417 aa15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 HELQQ8TDG4 1101 aa15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 PSPC1Q8WXF1 523 aaKnown RBP15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 HVCN1Q96D96 273 aa15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 SH2D3AQ9BRG2 576 aa15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 CCPG1Q9ULG6 757 aa15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 UBIAD1Q9Y5Z9 338 aa15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ZNF536O15090 1300 aa15.22■□□□□ 0.03
CDK5RAP3-237ENST00000585163 CHUKO15111 745 aa15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ECEL1O95672 775 aa15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 CAP2P40123 477 aa15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 GPC3P51654 580 aa15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 XRCC4Q13426 336 aa15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 CYB5D1Q6P9G0 228 aa15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 RNF207Q6ZRF8 634 aa15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 MIGA2Q7L4E1 593 aa15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 SLC17A8Q8NDX2 589 aa15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 UHMK1Q8TAS1 419 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 PARD3BQ8TEW8 1205 aa15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 JPH2Q9BR39 696 aaPredicted RBP15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ROPN1BQ9BZX4 212 aaPredicted RBP15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ROPN1Q9HAT0 212 aaPredicted RBP15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 GPRC5CQ9NQ84 441 aa15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 GEMIN8Q9NWZ8 242 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 TMEM150BA6NC51 233 aa15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 CCT8L1PA6NM43 557 aa15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 NFIBO00712 420 aa15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 FSCN2O14926 492 aa15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 TP73O15350 636 aa15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 SLCO1A2P46721 670 aa15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 PDE6CP51160 858 aa15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 MRPS9P82933 396 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 CALCOCO2Q13137 446 aa15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ITIH4Q14624 930 aa15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 PCNX4Q63HM2 1172 aa15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 TRMT10CQ7L0Y3 403 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 C7orf43Q8WVR3 580 aa15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 CLEC4DQ8WXI8 215 aa15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 DDX1Q92499 740 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 SGSM3Q96HU1 749 aa15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 PRMT1Q99873 361 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 GLIS2Q9BZE0 524 aaPredicted RBP15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 TMEM8AQ9HCN3 771 aa15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ZNF70Q9UC06 446 aaPredicted RBP15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ASTN2O75129 1339 aaPredicted RBP15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 CNTNAP1P78357 1384 aa15.21■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ZNFX1Q9P2E3 1918 aaKnown RBP15.21■□□□□ 0.02
CDK5RAP3-237ENST00000585163 GRIN3BO60391 1043 aa15.2■□□□□ 0.02
CDK5RAP3-237ENST00000585163 DNAJC8O75937 253 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-237ENST00000585163 MTMR1Q13613 665 aa15.2■□□□□ 0.02
CDK5RAP3-237ENST00000585163 PPP1R7Q15435 360 aa15.2■□□□□ 0.02
CDK5RAP3-237ENST00000585163 TAOK1Q7L7X3 1001 aa15.2■□□□□ 0.02
CDK5RAP3-237ENST00000585163 CCDC91Q7Z6B0 441 aa15.2■□□□□ 0.02
CDK5RAP3-237ENST00000585163 C4orf19Q8IY42 314 aa15.2■□□□□ 0.02
CDK5RAP3-237ENST00000585163 LRRC34Q8IZ02 419 aa15.2■□□□□ 0.02
CDK5RAP3-237ENST00000585163 CCDC127Q96BQ5 260 aa15.2■□□□□ 0.02
CDK5RAP3-237ENST00000585163 PLVAPQ9BX97 442 aa15.2■□□□□ 0.02
CDK5RAP3-237ENST00000585163 TBC1D22BQ9NU19 505 aa15.2■□□□□ 0.02
CDK5RAP3-237ENST00000585163 HAUS2Q9NVX0 235 aa15.2■□□□□ 0.02
CDK5RAP3-237ENST00000585163 WHRNQ9P202 907 aa15.2■□□□□ 0.02
CDK5RAP3-237ENST00000585163 TBX20Q9UMR3 447 aa15.2■□□□□ 0.02
CDK5RAP3-237ENST00000585163 EXOC7Q9UPT5 735 aa15.2■□□□□ 0.02
CDK5RAP3-237ENST00000585163 CLDN3O15551 220 aa15.2■□□□□ 0.02
CDK5RAP3-237ENST00000585163 PPIP5K2O43314 1243 aa15.2■□□□□ 0.02
CDK5RAP3-237ENST00000585163 CNGA1P29973 690 aa15.2■□□□□ 0.02
CDK5RAP3-237ENST00000585163 GHRHRQ02643 423 aa15.2■□□□□ 0.02
CDK5RAP3-237ENST00000585163 UGCGQ16739 394 aa15.2■□□□□ 0.02
CDK5RAP3-237ENST00000585163 MSL1Q68DK7 614 aa15.2■□□□□ 0.02
CDK5RAP3-237ENST00000585163 ACAD10Q6JQN1 1059 aa15.2■□□□□ 0.02
CDK5RAP3-237ENST00000585163 NSMFQ6X4W1 530 aa15.2■□□□□ 0.02
CDK5RAP3-237ENST00000585163 CD248Q9HCU0 757 aa15.2■□□□□ 0.02
CDK5RAP3-237ENST00000585163 TBC1D12O60347 775 aa15.19■□□□□ 0.02
CDK5RAP3-237ENST00000585163 MAP4K3Q8IVH8 894 aa15.19■□□□□ 0.02
CDK5RAP3-237ENST00000585163 PARP9Q8IXQ6 854 aa15.19■□□□□ 0.02
CDK5RAP3-237ENST00000585163 TMEM161BQ8NDZ6 487 aa15.19■□□□□ 0.02
CDK5RAP3-237ENST00000585163 FBXL13Q8NEE6 735 aa15.19■□□□□ 0.02
CDK5RAP3-237ENST00000585163 FLAD1Q8NFF5 587 aa15.19■□□□□ 0.02
CDK5RAP3-237ENST00000585163 TAS1R2Q8TE23 839 aa15.19■□□□□ 0.02
CDK5RAP3-237ENST00000585163 KIFAP3Q92845 792 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms