RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 N4BP1O75113 896 aaKnown RBP16.59■□□□□ 0.25
VAPA-209ENST00000585042 THP07101 528 aa16.59■□□□□ 0.25
VAPA-209ENST00000585042 NPR3P17342 541 aa16.59■□□□□ 0.25
VAPA-209ENST00000585042 CYP11B2P19099 503 aa16.59■□□□□ 0.25
VAPA-209ENST00000585042 GBP2P32456 591 aaPredicted RBP16.59■□□□□ 0.25
VAPA-209ENST00000585042 MCM7P33993 719 aa16.59■□□□□ 0.25
VAPA-209ENST00000585042 ELAVL2Q12926 359 aaKnown RBP16.59■□□□□ 0.25
VAPA-209ENST00000585042 HSP90AA2PQ14568 343 aaPredicted RBP16.59■□□□□ 0.25
VAPA-209ENST00000585042 PPP2R5AQ15172 486 aa16.59■□□□□ 0.25
VAPA-209ENST00000585042 MAPK6Q16659 721 aa16.59■□□□□ 0.25
VAPA-209ENST00000585042 PDXDC1Q6P996 788 aa16.59■□□□□ 0.25
VAPA-209ENST00000585042 PALB2Q86YC2 1186 aa16.59■□□□□ 0.25
VAPA-209ENST00000585042 SLC44A3Q8N4M1 653 aa16.59■□□□□ 0.25
VAPA-209ENST00000585042 RIN2Q8WYP3 895 aaPredicted RBP16.59■□□□□ 0.25
VAPA-209ENST00000585042 ADPGKQ9BRR6 497 aa16.59■□□□□ 0.25
VAPA-209ENST00000585042 LLPHQ9BRT6 129 aaKnown RBP16.59■□□□□ 0.25
VAPA-209ENST00000585042 FOXP1Q9H334 677 aaPredicted RBP16.59■□□□□ 0.25
VAPA-209ENST00000585042 PIDD1Q9HB75 910 aa16.59■□□□□ 0.25
VAPA-209ENST00000585042 FBXL21Q9UKT6 434 aa16.59■□□□□ 0.25
VAPA-209ENST00000585042 PLXNA3P51805 1871 aa16.59■□□□□ 0.25
VAPA-209ENST00000585042 F8W810 466 aa16.58■□□□□ 0.24
VAPA-209ENST00000585042 ACKR2O00590 384 aa16.58■□□□□ 0.24
VAPA-209ENST00000585042 MED24O75448 989 aa16.58■□□□□ 0.24
VAPA-209ENST00000585042 RFPL2O75678 378 aa16.58■□□□□ 0.24
VAPA-209ENST00000585042 ZMYND10O75800 440 aa16.58■□□□□ 0.24
VAPA-209ENST00000585042 NAMPTP43490 491 aa16.58■□□□□ 0.24
VAPA-209ENST00000585042 EFNA5P52803 228 aa16.58■□□□□ 0.24
VAPA-209ENST00000585042 PRPF4BQ13523 1007 aaKnown RBP16.58■□□□□ 0.24
VAPA-209ENST00000585042 CWF19L1Q69YN2 538 aaKnown RBP16.58■□□□□ 0.24
VAPA-209ENST00000585042 RTL10Q7L3V2 364 aa16.58■□□□□ 0.24
VAPA-209ENST00000585042 FLCNQ8NFG4 579 aa16.58■□□□□ 0.24
VAPA-209ENST00000585042 PIK3R5Q8WYR1 880 aa16.58■□□□□ 0.24
VAPA-209ENST00000585042 TTPALQ9BTX7 342 aa16.58■□□□□ 0.24
VAPA-209ENST00000585042 GPRC5CQ9NQ84 441 aa16.58■□□□□ 0.24
VAPA-209ENST00000585042 KLK14Q9P0G3 267 aa16.58■□□□□ 0.24
VAPA-209ENST00000585042 LIMCH1Q9UPQ0 1083 aa16.58■□□□□ 0.24
VAPA-209ENST00000585042 STK24Q9Y6E0 443 aa16.58■□□□□ 0.24
VAPA-209ENST00000585042 A0A087WWV3 80 aa16.57■□□□□ 0.24
VAPA-209ENST00000585042 HNRNPA1P09651 372 aaKnown RBP eCLIP16.57■□□□□ 0.241e-6■■□□□ 11.6
VAPA-209ENST00000585042 SPATA31D3P0C874 917 aa16.57■□□□□ 0.24
VAPA-209ENST00000585042 SRFP11831 508 aa16.57■□□□□ 0.24
VAPA-209ENST00000585042 LAMP2P13473 410 aa16.57■□□□□ 0.24
VAPA-209ENST00000585042 PADI6Q6TGC4 694 aa16.57■□□□□ 0.24
VAPA-209ENST00000585042 SPATA31D4Q6ZUB0 917 aa16.57■□□□□ 0.24
VAPA-209ENST00000585042 MAEAQ7L5Y9 396 aa16.57■□□□□ 0.24
VAPA-209ENST00000585042 CDR2LQ86X02 465 aaPredicted RBP16.57■□□□□ 0.24
VAPA-209ENST00000585042 CCDC105Q8IYK2 499 aa16.57■□□□□ 0.24
VAPA-209ENST00000585042 SIX5Q8N196 739 aa16.57■□□□□ 0.24
VAPA-209ENST00000585042 MYADMQ96S97 322 aa16.57■□□□□ 0.24
VAPA-209ENST00000585042 PDZD7Q9H5P4 517 aa16.57■□□□□ 0.24
VAPA-209ENST00000585042 ARHGEF35A5YM69 484 aa16.56■□□□□ 0.24
VAPA-209ENST00000585042 ANHXE9PGG2 379 aa16.56■□□□□ 0.24
VAPA-209ENST00000585042 OR52Z1P0C646 297 aa16.56■□□□□ 0.24
VAPA-209ENST00000585042 HOXA9P31269 272 aa16.56■□□□□ 0.24
VAPA-209ENST00000585042 TRAPPC10P48553 1259 aa16.56■□□□□ 0.24
VAPA-209ENST00000585042 RBM25P49756 843 aaKnown RBP16.56■□□□□ 0.24
VAPA-209ENST00000585042 PDIA5Q14554 519 aa16.56■□□□□ 0.24
VAPA-209ENST00000585042 UVSSAQ2YD98 709 aa16.56■□□□□ 0.24
VAPA-209ENST00000585042 DCAF4L1Q3SXM0 396 aa16.56■□□□□ 0.24
VAPA-209ENST00000585042 HAUS3Q68CZ6 603 aa16.56■□□□□ 0.24
VAPA-209ENST00000585042 APBB1IPQ7Z5R6 666 aaPredicted RBP16.56■□□□□ 0.24
VAPA-209ENST00000585042 DEPTORQ8TB45 409 aa16.56■□□□□ 0.24
VAPA-209ENST00000585042 KIFAP3Q92845 792 aa16.56■□□□□ 0.24
VAPA-209ENST00000585042 C8orf76Q96K31 380 aa16.56■□□□□ 0.24
VAPA-209ENST00000585042 B3GALT6Q96L58 329 aa16.56■□□□□ 0.24
VAPA-209ENST00000585042 IFT74Q96LB3 600 aa16.56■□□□□ 0.24
VAPA-209ENST00000585042 CCDC113Q9H0I3 377 aa16.56■□□□□ 0.24
VAPA-209ENST00000585042 SNTG2Q9NY99 539 aa16.56■□□□□ 0.24
VAPA-209ENST00000585042 TMEM189-UBE2V1I3L0A0 370 aa16.55■□□□□ 0.24
VAPA-209ENST00000585042 PTGESO14684 152 aa16.55■□□□□ 0.24
VAPA-209ENST00000585042 PI15O43692 258 aa16.55■□□□□ 0.24
VAPA-209ENST00000585042 PRKCBP05771 671 aa16.55■□□□□ 0.24
VAPA-209ENST00000585042 POU2F2P09086 479 aa16.55■□□□□ 0.24
VAPA-209ENST00000585042 FXR2P51116 673 aaKnown RBP eCLIP16.55■□□□□ 0.243e-19■■■□□ 15.2
VAPA-209ENST00000585042 NAB2Q15742 525 aa16.55■□□□□ 0.24
VAPA-209ENST00000585042 TMEM132AQ24JP5 1023 aa16.55■□□□□ 0.24
VAPA-209ENST00000585042 RTP2Q5QGT7 225 aa16.55■□□□□ 0.24
VAPA-209ENST00000585042 FAM171A1Q5VUB5 890 aa16.55■□□□□ 0.24
VAPA-209ENST00000585042 PHLDB3Q6NSJ2 640 aa16.55■□□□□ 0.24
VAPA-209ENST00000585042 POTEGQ6S5H5 508 aa16.55■□□□□ 0.24
VAPA-209ENST00000585042 DTWD2Q8NBA8 298 aa16.55■□□□□ 0.24
VAPA-209ENST00000585042 FBXO18Q8NFZ0 1043 aa16.55■□□□□ 0.24
VAPA-209ENST00000585042 LNX1Q8TBB1 728 aaPredicted RBP16.55■□□□□ 0.24
VAPA-209ENST00000585042 CLSTN3Q9BQT9 956 aa16.55■□□□□ 0.24
VAPA-209ENST00000585042 PAAF1Q9BRP4 392 aa16.55■□□□□ 0.24
VAPA-209ENST00000585042 FBXW11Q9UKB1 542 aa16.55■□□□□ 0.24
VAPA-209ENST00000585042 PRR23AA6NEV1 266 aa16.54■□□□□ 0.24
VAPA-209ENST00000585042 NARSO43776 548 aaKnown RBP16.54■□□□□ 0.24
VAPA-209ENST00000585042 RECQL4O94761 1208 aa16.54■□□□□ 0.24
VAPA-209ENST00000585042 HMGN5P82970 282 aaKnown RBP16.54■□□□□ 0.24
VAPA-209ENST00000585042 ZNF174Q15697 407 aa16.54■□□□□ 0.24
VAPA-209ENST00000585042 DCLRE1AQ6PJP8 1040 aa16.54■□□□□ 0.24
VAPA-209ENST00000585042 RSAD2Q8WXG1 361 aa16.54■□□□□ 0.24
VAPA-209ENST00000585042 BSNDQ8WZ55 320 aa16.54■□□□□ 0.24
VAPA-209ENST00000585042 NKD2Q969F2 451 aaPredicted RBP16.54■□□□□ 0.24
VAPA-209ENST00000585042 ZSCAN31Q96LW9 406 aaPredicted RBP16.54■□□□□ 0.24
VAPA-209ENST00000585042 UROC1Q96N76 676 aa16.54■□□□□ 0.24
VAPA-209ENST00000585042 SEMA4AQ9H3S1 761 aa16.54■□□□□ 0.24
VAPA-209ENST00000585042 SLC2A4RGQ9NR83 387 aa16.54■□□□□ 0.24
VAPA-209ENST00000585042 DOCK8Q8NF50 2099 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms