RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 SPEM2Q0P670 501 aa20.18■□□□□ 0.82
TOP3A-220ENST00000585031 MTAPQ13126 283 aa20.18■□□□□ 0.82
TOP3A-220ENST00000585031 COL9A2Q14055 689 aaPredicted RBP20.18■□□□□ 0.82
TOP3A-220ENST00000585031 AMHR2Q16671 573 aa20.18■□□□□ 0.82
TOP3A-220ENST00000585031 TSGA10IPQ3SY00 556 aa20.18■□□□□ 0.82
TOP3A-220ENST00000585031 MAMSTRQ6ZN01 415 aa20.18■□□□□ 0.82
TOP3A-220ENST00000585031 TPRG1Q6ZUI0 275 aa20.18■□□□□ 0.82
TOP3A-220ENST00000585031 ZNF687Q8N1G0 1237 aa20.18■□□□□ 0.82
TOP3A-220ENST00000585031 CNNM3Q8NE01 707 aa20.18■□□□□ 0.82
TOP3A-220ENST00000585031 BICD2Q8TD16 824 aa20.18■□□□□ 0.82
TOP3A-220ENST00000585031 PSPC1Q8WXF1 523 aaKnown RBP20.18■□□□□ 0.82
TOP3A-220ENST00000585031 ASPMQ8IZT6 3477 aa20.17■□□□□ 0.82
TOP3A-220ENST00000585031 NRG2O14511 850 aaPredicted RBP20.17■□□□□ 0.82
TOP3A-220ENST00000585031 LRP3O75074 770 aa20.17■□□□□ 0.82
TOP3A-220ENST00000585031 PFKPQ01813 784 aa20.17■□□□□ 0.82
TOP3A-220ENST00000585031 MTSS1LQ765P7 747 aa20.17■□□□□ 0.82
TOP3A-220ENST00000585031 FERMT3Q86UX7 667 aa20.17■□□□□ 0.82
TOP3A-220ENST00000585031 CDR2LQ86X02 465 aaPredicted RBP20.17■□□□□ 0.82
TOP3A-220ENST00000585031 NPAS3Q8IXF0 933 aa20.17■□□□□ 0.82
TOP3A-220ENST00000585031 LNX1Q8TBB1 728 aaPredicted RBP20.17■□□□□ 0.82
TOP3A-220ENST00000585031 CEP170P1Q96L14 293 aa20.17■□□□□ 0.82
TOP3A-220ENST00000585031 JPH2Q9BR39 696 aaPredicted RBP20.17■□□□□ 0.82
TOP3A-220ENST00000585031 CSRNP2Q9H175 543 aa20.17■□□□□ 0.82
TOP3A-220ENST00000585031 CXCL16Q9H2A7 254 aa20.17■□□□□ 0.82
TOP3A-220ENST00000585031 KLK14Q9P0G3 267 aa20.17■□□□□ 0.82
TOP3A-220ENST00000585031 VAV3Q9UKW4 847 aa20.17■□□□□ 0.82
TOP3A-220ENST00000585031 ZZEF1O43149 2961 aa20.17■□□□□ 0.82
TOP3A-220ENST00000585031 NID2Q14112 1375 aa20.17■□□□□ 0.82
TOP3A-220ENST00000585031 COL4A2P08572 1712 aa20.16■□□□□ 0.82
TOP3A-220ENST00000585031 M0R2N6 131 aa20.16■□□□□ 0.82
TOP3A-220ENST00000585031 NCAM2O15394 837 aa20.16■□□□□ 0.82
TOP3A-220ENST00000585031 SLC37A4O43826 429 aa20.16■□□□□ 0.82
TOP3A-220ENST00000585031 C8AP07357 584 aa20.16■□□□□ 0.82
TOP3A-220ENST00000585031 IGFBP6P24592 240 aaPredicted RBP20.16■□□□□ 0.82
TOP3A-220ENST00000585031 LAIR1Q6GTX8 287 aa20.16■□□□□ 0.82
TOP3A-220ENST00000585031 CELF5Q8N6W0 485 aaKnown RBP20.16■□□□□ 0.82
TOP3A-220ENST00000585031 HASPINQ8TF76 798 aa20.16■□□□□ 0.82
TOP3A-220ENST00000585031 SLC7A3Q8WY07 619 aa20.16■□□□□ 0.82
TOP3A-220ENST00000585031 ING5Q8WYH8 240 aa20.16■□□□□ 0.82
TOP3A-220ENST00000585031 PHF20Q9BVI0 1012 aa20.16■□□□□ 0.82
TOP3A-220ENST00000585031 XPNPEP1Q9NQW7 623 aa20.16■□□□□ 0.82
TOP3A-220ENST00000585031 HEBP1Q9NRV9 189 aa20.16■□□□□ 0.82
TOP3A-220ENST00000585031 DNMT3BQ9UBC3 853 aaKnown RBP20.16■□□□□ 0.82
TOP3A-220ENST00000585031 GIT1Q9Y2X7 761 aa20.16■□□□□ 0.82
TOP3A-220ENST00000585031 CEP295Q9C0D2 2601 aa20.16■□□□□ 0.82
TOP3A-220ENST00000585031 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.15■□□□□ 0.82
TOP3A-220ENST00000585031 HNRNPA1P09651 372 aaKnown RBP eCLIP20.15■□□□□ 0.82
TOP3A-220ENST00000585031 QARSP47897 775 aaKnown RBP20.15■□□□□ 0.82
TOP3A-220ENST00000585031 PTENP60484 403 aa20.15■□□□□ 0.82
TOP3A-220ENST00000585031 NPY5RQ15761 445 aa20.15■□□□□ 0.82
TOP3A-220ENST00000585031 PPM1LQ5SGD2 360 aa20.15■□□□□ 0.82
TOP3A-220ENST00000585031 Q6ZUG5 572 aa20.15■□□□□ 0.82
TOP3A-220ENST00000585031 BRF1Q92994 677 aa20.15■□□□□ 0.82
TOP3A-220ENST00000585031 SLC26A6Q9BXS9 759 aa20.15■□□□□ 0.82
TOP3A-220ENST00000585031 POLIQ9UNA4 740 aa20.15■□□□□ 0.82
TOP3A-220ENST00000585031 LAMA1P25391 3075 aa20.14■□□□□ 0.82
TOP3A-220ENST00000585031 CCDC196A0A1B0GTZ2 297 aa20.14■□□□□ 0.81
TOP3A-220ENST00000585031 B4GALT5O43286 388 aa20.14■□□□□ 0.81
TOP3A-220ENST00000585031 NR1I2O75469 434 aa20.14■□□□□ 0.81
TOP3A-220ENST00000585031 TADA2AO75478 443 aa20.14■□□□□ 0.81
TOP3A-220ENST00000585031 RETP07949 1114 aa20.14■□□□□ 0.81
TOP3A-220ENST00000585031 ARF4P18085 180 aaPredicted RBP20.14■□□□□ 0.81
TOP3A-220ENST00000585031 PMLP29590 882 aa20.14■□□□□ 0.81
TOP3A-220ENST00000585031 EMC2Q15006 297 aa20.14■□□□□ 0.81
TOP3A-220ENST00000585031 RNF20Q5VTR2 975 aa20.14■□□□□ 0.81
TOP3A-220ENST00000585031 NOTUMQ6P988 496 aa20.14■□□□□ 0.81
TOP3A-220ENST00000585031 ANGPTL2Q9UKU9 493 aa20.14■□□□□ 0.81
TOP3A-220ENST00000585031 FASNP49327 2511 aaKnown RBP20.14■□□□□ 0.81
TOP3A-220ENST00000585031 SDK1Q7Z5N4 2213 aa20.14■□□□□ 0.81
TOP3A-220ENST00000585031 TRIP11Q15643 1979 aa20.14■□□□□ 0.81
TOP3A-220ENST00000585031 TICRRQ7Z2Z1 1910 aa20.14■□□□□ 0.81
TOP3A-220ENST00000585031 GDF9O60383 454 aa20.13■□□□□ 0.81
TOP3A-220ENST00000585031 ERLIN2O94905 339 aa20.13■□□□□ 0.81
TOP3A-220ENST00000585031 AXLP30530 894 aa20.13■□□□□ 0.81
TOP3A-220ENST00000585031 NRLP54845 237 aa20.13■□□□□ 0.81
TOP3A-220ENST00000585031 SHC2P98077 582 aa20.13■□□□□ 0.81
TOP3A-220ENST00000585031 MBTD1Q05BQ5 628 aa20.13■□□□□ 0.81
TOP3A-220ENST00000585031 PPP2R5CQ13362 524 aa20.13■□□□□ 0.81
TOP3A-220ENST00000585031 HSP90AA2PQ14568 343 aaPredicted RBP20.13■□□□□ 0.81
TOP3A-220ENST00000585031 PSMD5Q16401 504 aa20.13■□□□□ 0.81
TOP3A-220ENST00000585031 SLC5A9Q2M3M2 681 aa20.13■□□□□ 0.81
TOP3A-220ENST00000585031 FAM171A1Q5VUB5 890 aa20.13■□□□□ 0.81
TOP3A-220ENST00000585031 TANGO2Q6ICL3 276 aa20.13■□□□□ 0.81
TOP3A-220ENST00000585031 CCDC148Q8NFR7 591 aa20.13■□□□□ 0.81
TOP3A-220ENST00000585031 SLC7A14Q8TBB6 771 aa20.13■□□□□ 0.81
TOP3A-220ENST00000585031 ASAP3Q8TDY4 903 aa20.13■□□□□ 0.81
TOP3A-220ENST00000585031 PIK3R5Q8WYR1 880 aa20.13■□□□□ 0.81
TOP3A-220ENST00000585031 MCRS1Q96EZ8 462 aa20.13■□□□□ 0.81
TOP3A-220ENST00000585031 RNF26Q9BY78 433 aaPredicted RBP20.13■□□□□ 0.81
TOP3A-220ENST00000585031 NCOA5Q9HCD5 579 aaKnown RBP20.13■□□□□ 0.81
TOP3A-220ENST00000585031 RGL1Q9NZL6 768 aa20.13■□□□□ 0.81
TOP3A-220ENST00000585031 SPEGQ15772 3267 aa20.13■□□□□ 0.81
TOP3A-220ENST00000585031 ASAP2O43150 1006 aa20.12■□□□□ 0.81
TOP3A-220ENST00000585031 KIF4AO95239 1232 aa20.12■□□□□ 0.81
TOP3A-220ENST00000585031 HOXA9P31269 272 aa20.12■□□□□ 0.81
TOP3A-220ENST00000585031 RFC5P40937 340 aa20.12■□□□□ 0.81
TOP3A-220ENST00000585031 NLRP5P59047 1200 aa20.12■□□□□ 0.81
TOP3A-220ENST00000585031 ADCY1Q08828 1119 aa20.12■□□□□ 0.81
TOP3A-220ENST00000585031 GRIK3Q13003 919 aa20.12■□□□□ 0.81
TOP3A-220ENST00000585031 AXDND1Q5T1B0 1012 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms