RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 CTSAP10619 480 aa29.78■■■□□ 2.36
SMARCD2-210ENST00000584400 PROZP22891 400 aa29.78■■■□□ 2.36
SMARCD2-210ENST00000584400 GTF2F1P35269 517 aaKnown RBP eCLIP29.78■■■□□ 2.36
SMARCD2-210ENST00000584400 BICD1Q96G01 975 aa29.78■■■□□ 2.36
SMARCD2-210ENST00000584400 PANK2Q9BZ23 570 aa29.78■■■□□ 2.36
SMARCD2-210ENST00000584400 ZBP1Q9H171 429 aa29.78■■■□□ 2.36
SMARCD2-210ENST00000584400 CUEDC2Q9H467 287 aa29.78■■■□□ 2.36
SMARCD2-210ENST00000584400 SSX2IPQ9Y2D8 614 aa29.78■■■□□ 2.36
SMARCD2-210ENST00000584400 IRAK3Q9Y616 596 aa29.78■■■□□ 2.36
SMARCD2-210ENST00000584400 PLXNA4Q9HCM2 1894 aa29.77■■■□□ 2.36
SMARCD2-210ENST00000584400 H3BQ06 376 aaPredicted RBP29.77■■■□□ 2.36
SMARCD2-210ENST00000584400 PER2O15055 1255 aa29.77■■■□□ 2.36
SMARCD2-210ENST00000584400 BRD1O95696 1058 aa29.77■■■□□ 2.36
SMARCD2-210ENST00000584400 ME1P48163 572 aa29.77■■■□□ 2.36
SMARCD2-210ENST00000584400 TUSC3Q13454 348 aa29.77■■■□□ 2.36
SMARCD2-210ENST00000584400 DDX12PQ92771 950 aa29.77■■■□□ 2.36
SMARCD2-210ENST00000584400 C2orf71A6NGG8 1288 aa29.76■■■□□ 2.35
SMARCD2-210ENST00000584400 HIDE1A8MVS5 230 aa29.76■■■□□ 2.35
SMARCD2-210ENST00000584400 CLDN3O15551 220 aa29.76■■■□□ 2.35
SMARCD2-210ENST00000584400 LTBRP36941 435 aa29.76■■■□□ 2.35
SMARCD2-210ENST00000584400 DNM1Q05193 864 aaKnown RBP29.76■■■□□ 2.35
SMARCD2-210ENST00000584400 PTCRAQ6ISU1 281 aaPredicted RBP29.76■■■□□ 2.35
SMARCD2-210ENST00000584400 DYMQ7RTS9 669 aa29.76■■■□□ 2.35
SMARCD2-210ENST00000584400 ZBTB33Q86T24 672 aa29.76■■■□□ 2.35
SMARCD2-210ENST00000584400 PDILTQ8N807 584 aa29.76■■■□□ 2.35
SMARCD2-210ENST00000584400 GADD45GIP1Q8TAE8 222 aaPredicted RBP29.76■■■□□ 2.35
SMARCD2-210ENST00000584400 BCL7CQ8WUZ0 217 aaPredicted RBP29.76■■■□□ 2.35
SMARCD2-210ENST00000584400 UHRF1Q96T88 793 aaPredicted RBP29.76■■■□□ 2.35
SMARCD2-210ENST00000584400 ANKFY1Q9P2R3 1169 aa29.76■■■□□ 2.35
SMARCD2-210ENST00000584400 SEL1LQ9UBV2 794 aa29.76■■■□□ 2.35
SMARCD2-210ENST00000584400 TBX20Q9UMR3 447 aa29.76■■■□□ 2.35
SMARCD2-210ENST00000584400 PRUNE2Q8WUY3 3088 aa29.76■■■□□ 2.35
SMARCD2-210ENST00000584400 LINC01565O15544 149 aa29.75■■■□□ 2.35
SMARCD2-210ENST00000584400 GAP43P17677 238 aa29.75■■■□□ 2.35
SMARCD2-210ENST00000584400 MATR3P43243 847 aaKnown RBP eCLIP29.75■■■□□ 2.35
SMARCD2-210ENST00000584400 LIG4P49917 911 aa29.75■■■□□ 2.35
SMARCD2-210ENST00000584400 NOLC1Q14978 699 aaKnown RBP eCLIP29.75■■■□□ 2.35
SMARCD2-210ENST00000584400 IQUBQ8NA54 791 aa29.75■■■□□ 2.35
SMARCD2-210ENST00000584400 ACAP3Q96P50 834 aa29.75■■■□□ 2.35
SMARCD2-210ENST00000584400 FAM13BQ9NYF5 915 aa29.75■■■□□ 2.35
SMARCD2-210ENST00000584400 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP29.74■■■□□ 2.35
SMARCD2-210ENST00000584400 SOD2P04179 222 aa29.74■■■□□ 2.35
SMARCD2-210ENST00000584400 AMPD3Q01432 767 aa29.74■■■□□ 2.35
SMARCD2-210ENST00000584400 KYAT1Q16773 422 aa29.74■■■□□ 2.35
SMARCD2-210ENST00000584400 TNMDQ9H2S6 317 aa29.74■■■□□ 2.35
SMARCD2-210ENST00000584400 ST6GALNAC4Q9H4F1 302 aa29.74■■■□□ 2.35
SMARCD2-210ENST00000584400 MARCH5Q9NX47 278 aa29.74■■■□□ 2.35
SMARCD2-210ENST00000584400 CD207Q9UJ71 328 aa29.74■■■□□ 2.35
SMARCD2-210ENST00000584400 RCOR1Q9UKL0 485 aa29.74■■■□□ 2.35
SMARCD2-210ENST00000584400 UNC80Q8N2C7 3258 aa29.74■■■□□ 2.35
SMARCD2-210ENST00000584400 GRXCR2A6NFK2 248 aa29.73■■■□□ 2.35
SMARCD2-210ENST00000584400 MYMKA6NI61 221 aa29.73■■■□□ 2.35
SMARCD2-210ENST00000584400 PTGESO14684 152 aa29.73■■■□□ 2.35
SMARCD2-210ENST00000584400 HNRNPDLO14979 420 aaKnown RBP29.73■■■□□ 2.35
SMARCD2-210ENST00000584400 TBX10O75333 385 aa29.73■■■□□ 2.35
SMARCD2-210ENST00000584400 KRT85P78386 507 aa29.73■■■□□ 2.35
SMARCD2-210ENST00000584400 GTF2BQ00403 316 aa29.73■■■□□ 2.35
SMARCD2-210ENST00000584400 TMEM184AQ6ZMB5 413 aa29.73■■■□□ 2.35
SMARCD2-210ENST00000584400 PYM1Q9BRP8 204 aaKnown RBP29.73■■■□□ 2.35
SMARCD2-210ENST00000584400 EMILIN2Q9BXX0 1053 aa29.73■■■□□ 2.35
SMARCD2-210ENST00000584400 MRPL17Q9NRX2 175 aaKnown RBP29.73■■■□□ 2.35
SMARCD2-210ENST00000584400 TADA2AO75478 443 aa29.72■■■□□ 2.35
SMARCD2-210ENST00000584400 URODP06132 367 aa29.72■■■□□ 2.35
SMARCD2-210ENST00000584400 HARSP12081 509 aaKnown RBP29.72■■■□□ 2.35
SMARCD2-210ENST00000584400 OSTNP61366 133 aa29.72■■■□□ 2.35
SMARCD2-210ENST00000584400 DLX2Q07687 328 aaPredicted RBP29.72■■■□□ 2.35
SMARCD2-210ENST00000584400 MCL1Q07820 350 aa29.72■■■□□ 2.35
SMARCD2-210ENST00000584400 HSP90AA2PQ14568 343 aaPredicted RBP29.72■■■□□ 2.35
SMARCD2-210ENST00000584400 SHC4Q6S5L8 630 aa29.72■■■□□ 2.35
SMARCD2-210ENST00000584400 PPFIBP1Q86W92 1011 aa29.72■■■□□ 2.35
SMARCD2-210ENST00000584400 HVCN1Q96D96 273 aa29.72■■■□□ 2.35
SMARCD2-210ENST00000584400 HERC2P3Q9BVR0 1158 aa29.72■■■□□ 2.35
SMARCD2-210ENST00000584400 SLC38A7Q9NVC3 462 aa29.72■■■□□ 2.35
SMARCD2-210ENST00000584400 ADAM28Q9UKQ2 775 aa29.72■■■□□ 2.35
SMARCD2-210ENST00000584400 PCDHA7Q9UN72 937 aa29.72■■■□□ 2.35
SMARCD2-210ENST00000584400 A0A087X0B3 334 aa29.71■■■□□ 2.35
SMARCD2-210ENST00000584400 ABLIM1O14639 778 aa29.71■■■□□ 2.35
SMARCD2-210ENST00000584400 PIGRP01833 764 aa29.71■■■□□ 2.35
SMARCD2-210ENST00000584400 COASYQ13057 564 aa29.71■■■□□ 2.35
SMARCD2-210ENST00000584400 SMAD4Q13485 552 aaKnown RBP29.71■■■□□ 2.35
SMARCD2-210ENST00000584400 AXDND1Q5T1B0 1012 aaPredicted RBP29.71■■■□□ 2.35
SMARCD2-210ENST00000584400 KIAA1841Q6NSI8 718 aa29.71■■■□□ 2.35
SMARCD2-210ENST00000584400 CEP120Q8N960 986 aa29.71■■■□□ 2.35
SMARCD2-210ENST00000584400 CASP10Q92851 521 aa29.71■■■□□ 2.35
SMARCD2-210ENST00000584400 ZBTB45Q96K62 511 aaPredicted RBP29.71■■■□□ 2.35
SMARCD2-210ENST00000584400 UROC1Q96N76 676 aa29.71■■■□□ 2.35
SMARCD2-210ENST00000584400 MAGEF1Q9HAY2 307 aa29.71■■■□□ 2.35
SMARCD2-210ENST00000584400 IDEP14735 1019 aa29.7■■■□□ 2.35
SMARCD2-210ENST00000584400 NMT1P30419 496 aaKnown RBP29.7■■■□□ 2.35
SMARCD2-210ENST00000584400 PTPN14Q15678 1187 aa29.7■■■□□ 2.35
SMARCD2-210ENST00000584400 SFR1Q86XK3 245 aa29.7■■■□□ 2.35
SMARCD2-210ENST00000584400 MAP4K3Q8IVH8 894 aa29.7■■■□□ 2.35
SMARCD2-210ENST00000584400 DNAJC19Q96DA6 116 aa29.7■■■□□ 2.35
SMARCD2-210ENST00000584400 MSLNLQ96KJ4 702 aa29.7■■■□□ 2.35
SMARCD2-210ENST00000584400 FIZ1Q96SL8 496 aa29.7■■■□□ 2.35
SMARCD2-210ENST00000584400 VN1R3Q9BXE9 311 aa29.7■■■□□ 2.35
SMARCD2-210ENST00000584400 MRPL44Q9H9J2 332 aaKnown RBP29.7■■■□□ 2.35
SMARCD2-210ENST00000584400 CLEC1BQ9P126 229 aa29.7■■■□□ 2.35
SMARCD2-210ENST00000584400 BARX2Q9UMQ3 279 aaPredicted RBP29.7■■■□□ 2.35
SMARCD2-210ENST00000584400 CASTOR2A6NHX0 329 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms