RNA–Protein interactions for RNA: ENST00000584054.5

EIF4A1-231, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 2

Gene EIF4A1, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-231	ENST00000584054	NOLC1	Q14978	699 aa	Known RBP eCLIP	10.89	□□□□□ -0.67	1e-323	■□□□□ 11.3
EIF4A1-231	ENST00000584054	ZBTB6	Q15916	424 aa		10.89	□□□□□ -0.67
EIF4A1-231	ENST00000584054	STX1A	Q16623	288 aa		10.89	□□□□□ -0.67
EIF4A1-231	ENST00000584054	SASS6	Q6UVJ0	657 aa		10.89	□□□□□ -0.67
EIF4A1-231	ENST00000584054	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	10.89	□□□□□ -0.67	8e-24	■■■■■ 39
EIF4A1-231	ENST00000584054	HS2ST1	Q7LGA3	356 aa		10.89	□□□□□ -0.67
EIF4A1-231	ENST00000584054	FILIP1	Q7Z7B0	1213 aa		10.89	□□□□□ -0.67
EIF4A1-231	ENST00000584054	DEFB128	Q7Z7B8	93 aa		10.89	□□□□□ -0.67
EIF4A1-231	ENST00000584054	NELFCD	Q8IXH7	590 aa		10.89	□□□□□ -0.67
EIF4A1-231	ENST00000584054	ZSWIM2	Q8NEG5	633 aa		10.89	□□□□□ -0.67
EIF4A1-231	ENST00000584054	CEP63	Q96MT8	703 aa		10.89	□□□□□ -0.67
EIF4A1-231	ENST00000584054	TSPAN18	Q96SJ8	248 aa		10.89	□□□□□ -0.67
EIF4A1-231	ENST00000584054	MKNK1	Q9BUB5	465 aa		10.89	□□□□□ -0.67
EIF4A1-231	ENST00000584054	HSD3B7	Q9H2F3	369 aa		10.89	□□□□□ -0.67
EIF4A1-231	ENST00000584054	PLEKHA5	Q9HAU0	1116 aa		10.89	□□□□□ -0.67
EIF4A1-231	ENST00000584054	HSPBP1	Q9NZL4	362 aa		10.89	□□□□□ -0.67
EIF4A1-231	ENST00000584054	AGO2	Q9UKV8	859 aa	Known RBP	10.89	□□□□□ -0.67
EIF4A1-231	ENST00000584054	MAPK8IP1	Q9UQF2	711 aa		10.89	□□□□□ -0.67
EIF4A1-231	ENST00000584054	IPP	Q9Y573	584 aa		10.89	□□□□□ -0.67
EIF4A1-231	ENST00000584054	RANBP2	P49792	3224 aa	Known RBP	10.89	□□□□□ -0.67
EIF4A1-231	ENST00000584054	CEP290	O15078	2479 aa		10.89	□□□□□ -0.67
EIF4A1-231	ENST00000584054	BICDL2	A1A5D9	508 aa		10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	SYCE3	A1L190	88 aa		10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	IKBKB	O14920	756 aa		10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	CALU	O43852	315 aa	Predicted RBP	10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	NR3C1	P04150	777 aa		10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	CLTA	P09496	248 aa		10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	CCDC192	P0DO97	292 aa		10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	ACTN1	P12814	892 aa		10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	KCNE1	P15382	129 aa		10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	HTRA4	P83105	476 aa	Predicted RBP	10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	STIM1	Q13586	685 aa		10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	IQCB1	Q15051	598 aa		10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	NAB2	Q15742	525 aa		10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	SLC10A6	Q3KNW5	377 aa		10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	ZBTB41	Q5SVQ8	909 aa		10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	TWF2	Q6IBS0	349 aa	Known RBP	10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	LRSAM1	Q6UWE0	723 aa		10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	C11orf57	Q6ZUT1	292 aa	Predicted RBP	10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	CDR2L	Q86X02	465 aa	Predicted RBP	10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	NPAS4	Q8IUM7	802 aa		10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	TMEM192	Q8IY95	271 aa		10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	SYCP3	Q8IZU3	236 aa		10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	CEP120	Q8N960	986 aa		10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	XXYLT1	Q8NBI6	393 aa		10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	NELFB	Q8WX92	580 aa		10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	ARID3A	Q99856	593 aa		10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	LBHD1	Q9BQE6	289 aa	Predicted RBP	10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	ADPGK	Q9BRR6	497 aa		10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	NXF3	Q9H4D5	531 aa	Known RBP	10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	UBN1	Q9NPG3	1134 aa		10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	CXXC1	Q9P0U4	656 aa	Predicted RBP	10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	PCDH10	Q9P2E7	1040 aa		10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	DACH1	Q9UI36	760 aa		10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	GIT1	Q9Y2X7	761 aa		10.88	□□□□□ -0.67
EIF4A1-231	ENST00000584054	TRIM49B	A6NDI0	452 aa		10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	LRRC10B	A6NIK2	292 aa		10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	MEIS3P2	A8K0S8	358 aa		10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	CLIC2	O15247	247 aa		10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	OFD1	O75665	1012 aa		10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	DGKI	O75912	1065 aa		10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	AKAP3	O75969	853 aa		10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	NPTXR	O95502	500 aa		10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	LINC00271	P0C7V0	271 aa		10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	STAG3L1	P0CL83	205 aa		10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	ZNF18	P17022	549 aa		10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	RPL13	P26373	211 aa	Known RBP	10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	MLLT1	Q03111	559 aa	Predicted RBP	10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	ADAM9	Q13443	819 aa		10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	HSP90AA2P	Q14568	343 aa	Predicted RBP	10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	ENOX2	Q16206	610 aa	Known RBP	10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	ZNF568	Q3ZCX4	644 aa		10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	C9orf50	Q5SZB4	431 aa		10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	C1orf220	Q5T0J3	134 aa		10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	SPATA1	Q5VX52	437 aa		10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	ARMCX5	Q6P1M9	558 aa		10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	BRSK2	Q8IWQ3	736 aa		10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	CD302	Q8IX05	232 aa		10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	GPD1L	Q8N335	351 aa		10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	CXorf38	Q8TB03	319 aa		10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	PLEKHO2	Q8TD55	490 aa		10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	SP7	Q8TDD2	431 aa	Predicted RBP	10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	POMGNT1	Q8WZA1	660 aa		10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	PGBD4	Q96DM1	585 aa		10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	MSTO1	Q9BUK6	570 aa		10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	ASB7	Q9H672	318 aa		10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	CNTN3	Q9P232	1028 aa		10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	PDE4DIP	Q5VU43	2346 aa		10.87	□□□□□ -0.67
EIF4A1-231	ENST00000584054	PTPRS	Q13332	1948 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	PTGES	O14684	152 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	PMM2	O15305	246 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	SLC16A3	O15427	465 aa	Known RBP	10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	GJB5	O95377	273 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	NR2F2	P24468	414 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	TNFSF9	P41273	254 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	CASP4	P49662	377 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	WNT7B	P56706	349 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	DEFB103A	P81534	67 aa		10.86	□□□□□ -0.67
EIF4A1-231	ENST00000584054	PSMD6	Q15008	389 aa		10.86	□□□□□ -0.67

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