RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 CBWD1Q9BRT8 395 aa10.02□□□□□ -0.81
CASC3-209ENST00000583902 CCDC94Q9BW85 323 aaPredicted RBP10.02□□□□□ -0.81
CASC3-209ENST00000583902 FAM124BQ9H5Z6 455 aaPredicted RBP10.02□□□□□ -0.81
CASC3-209ENST00000583902 C11orf49Q9H6J7 331 aa10.02□□□□□ -0.81
CASC3-209ENST00000583902 UBN1Q9NPG3 1134 aa10.02□□□□□ -0.81
CASC3-209ENST00000583902 TOPORSQ9NS56 1045 aaPredicted RBP10.02□□□□□ -0.81
CASC3-209ENST00000583902 FBXL5Q9UKA1 691 aa10.02□□□□□ -0.81
CASC3-209ENST00000583902 DERAQ9Y315 318 aa10.02□□□□□ -0.81
CASC3-209ENST00000583902 CDY2AQ9Y6F7 541 aa10.02□□□□□ -0.81
CASC3-209ENST00000583902 ANKRD63C9JTQ0 380 aa10.01□□□□□ -0.81
CASC3-209ENST00000583902 ABLIM1O14639 778 aa10.01□□□□□ -0.81
CASC3-209ENST00000583902 XPOTO43592 962 aaKnown RBP10.01□□□□□ -0.81
CASC3-209ENST00000583902 B4GALT4O60513 344 aa10.01□□□□□ -0.81
CASC3-209ENST00000583902 ZNF623O75123 536 aa10.01□□□□□ -0.81
CASC3-209ENST00000583902 ZC3H11AO75152 810 aaKnown RBP eCLIP10.01□□□□□ -0.81
CASC3-209ENST00000583902 CHRNA1P02708 482 aa10.01□□□□□ -0.81
CASC3-209ENST00000583902 AFPP02771 609 aaKnown RBP10.01□□□□□ -0.81
CASC3-209ENST00000583902 ADRB2P07550 413 aa10.01□□□□□ -0.81
CASC3-209ENST00000583902 CKBP12277 381 aa10.01□□□□□ -0.81
CASC3-209ENST00000583902 ATP1A3P13637 1013 aa10.01□□□□□ -0.81
CASC3-209ENST00000583902 PAX3P23760 479 aa10.01□□□□□ -0.81
CASC3-209ENST00000583902 VAMP7P51809 220 aa10.01□□□□□ -0.81
CASC3-209ENST00000583902 YARSP54577 528 aaKnown RBP10.01□□□□□ -0.81
CASC3-209ENST00000583902 ZNF200P98182 395 aaPredicted RBP10.01□□□□□ -0.81
CASC3-209ENST00000583902 UBXN1Q04323 297 aa10.01□□□□□ -0.81
CASC3-209ENST00000583902 CYP24A1Q07973 514 aa10.01□□□□□ -0.81
CASC3-209ENST00000583902 HIC1Q14526 733 aa10.01□□□□□ -0.81
CASC3-209ENST00000583902 HS1BP3Q53T59 392 aa10.01□□□□□ -0.81
CASC3-209ENST00000583902 FBXO47Q5MNV8 452 aa10.01□□□□□ -0.81
CASC3-209ENST00000583902 SLC39A4Q6P5W5 647 aa10.01□□□□□ -0.81
CASC3-209ENST00000583902 VSTM4Q8IW00 320 aa10.01□□□□□ -0.81
CASC3-209ENST00000583902 BRSK2Q8IWQ3 736 aa10.01□□□□□ -0.81
CASC3-209ENST00000583902 SLC35C1Q96A29 364 aa10.01□□□□□ -0.81
CASC3-209ENST00000583902 ACAP3Q96P50 834 aa10.01□□□□□ -0.81
CASC3-209ENST00000583902 FNBP1Q96RU3 617 aa10.01□□□□□ -0.81
CASC3-209ENST00000583902 PPP1R9BQ96SB3 815 aa10.01□□□□□ -0.81
CASC3-209ENST00000583902 OSMRQ99650 979 aa10.01□□□□□ -0.81
CASC3-209ENST00000583902 XPO4Q9C0E2 1151 aaKnown RBP10.01□□□□□ -0.81
CASC3-209ENST00000583902 NUCKS1Q9H1E3 243 aaKnown RBP10.01□□□□□ -0.81
CASC3-209ENST00000583902 PDZD7Q9H5P4 517 aa10.01□□□□□ -0.81
CASC3-209ENST00000583902 MINDY3Q9H8M7 445 aa10.01□□□□□ -0.81
CASC3-209ENST00000583902 RPF1Q9H9Y2 349 aaKnown RBP10.01□□□□□ -0.81
CASC3-209ENST00000583902 C1orf112Q9NSG2 853 aa10.01□□□□□ -0.81
CASC3-209ENST00000583902 TRMT13Q9NUP7 481 aaKnown RBP10.01□□□□□ -0.81
CASC3-209ENST00000583902 IFNKQ9P0W0 207 aa10.01□□□□□ -0.81
CASC3-209ENST00000583902 CPSF3Q9UKF6 684 aaKnown RBP10.01□□□□□ -0.81
CASC3-209ENST00000583902 USP20Q9Y2K6 914 aa10.01□□□□□ -0.81
CASC3-209ENST00000583902 CARNS1A5YM72 827 aa10□□□□□ -0.81
CASC3-209ENST00000583902 PFKMP08237 780 aa10□□□□□ -0.81
CASC3-209ENST00000583902 HOXA11P31270 313 aaPredicted RBP10□□□□□ -0.81
CASC3-209ENST00000583902 GRM5P41594 1212 aa10□□□□□ -0.81
CASC3-209ENST00000583902 KCNH2Q12809 1159 aa10□□□□□ -0.81
CASC3-209ENST00000583902 PAK2Q13177 524 aa10□□□□□ -0.81
CASC3-209ENST00000583902 MIIPQ5JXC2 388 aa10□□□□□ -0.81
CASC3-209ENST00000583902 KRT39Q6A163 491 aa10□□□□□ -0.81
CASC3-209ENST00000583902 LRRC8DQ7L1W4 858 aa10□□□□□ -0.81
CASC3-209ENST00000583902 CREBRFQ8IUR6 639 aa10□□□□□ -0.81
CASC3-209ENST00000583902 WDR49Q8IV35 697 aa10□□□□□ -0.81
CASC3-209ENST00000583902 PARD3BQ8TEW8 1205 aa10□□□□□ -0.81
CASC3-209ENST00000583902 TRIM6Q9C030 488 aaPredicted RBP10□□□□□ -0.81
CASC3-209ENST00000583902 MCOLN1Q9GZU1 580 aa10□□□□□ -0.81
CASC3-209ENST00000583902 TMEM8AQ9HCN3 771 aa10□□□□□ -0.81
CASC3-209ENST00000583902 PLCB1Q9NQ66 1216 aa10□□□□□ -0.81
CASC3-209ENST00000583902 RBAKQ9NYW8 714 aaPredicted RBP10□□□□□ -0.81
CASC3-209ENST00000583902 ANKFY1Q9P2R3 1169 aa10□□□□□ -0.81
CASC3-209ENST00000583902 MYO6Q9UM54 1294 aa10□□□□□ -0.81
CASC3-209ENST00000583902 GINS2Q9Y248 185 aa10□□□□□ -0.81
CASC3-209ENST00000583902 COQ4Q9Y3A0 265 aa10□□□□□ -0.81
CASC3-209ENST00000583902 C2CD2Q9Y426 696 aa10□□□□□ -0.81
CASC3-209ENST00000583902 RALGAPA2Q2PPJ7 1873 aa10□□□□□ -0.81
CASC3-209ENST00000583902 A0A1W2PQJ5 194 aa9.99□□□□□ -0.81
CASC3-209ENST00000583902 FAM189A1O60320 539 aa9.99□□□□□ -0.81
CASC3-209ENST00000583902 EFCAB14O75071 495 aa9.99□□□□□ -0.81
CASC3-209ENST00000583902 EOMESO95936 686 aa9.99□□□□□ -0.81
CASC3-209ENST00000583902 IQCF3P0C7M6 154 aa9.99□□□□□ -0.81
CASC3-209ENST00000583902 PBX1P40424 430 aa9.99□□□□□ -0.81
CASC3-209ENST00000583902 CASP4P49662 377 aa9.99□□□□□ -0.81
CASC3-209ENST00000583902 DUOXA2Q1HG44 320 aa9.99□□□□□ -0.81
CASC3-209ENST00000583902 TCERG1LQ5VWI1 586 aa9.99□□□□□ -0.81
CASC3-209ENST00000583902 GBP6Q6ZN66 633 aa9.99□□□□□ -0.81
CASC3-209ENST00000583902 FAM228AQ86W67 206 aa9.99□□□□□ -0.81
CASC3-209ENST00000583902 PPFIBP1Q86W92 1011 aa9.99□□□□□ -0.81
CASC3-209ENST00000583902 CNGA4Q8IV77 575 aa9.99□□□□□ -0.81
CASC3-209ENST00000583902 DRC7Q8IY82 874 aa9.99□□□□□ -0.81
CASC3-209ENST00000583902 CCDC150Q8NCX0 1101 aa9.99□□□□□ -0.81
CASC3-209ENST00000583902 ZNF397Q8NF99 534 aaPredicted RBP9.99□□□□□ -0.81
CASC3-209ENST00000583902 DHX38Q92620 1227 aaKnown RBP9.99□□□□□ -0.81
CASC3-209ENST00000583902 TAF4BQ92750 862 aa9.99□□□□□ -0.81
CASC3-209ENST00000583902 JAKMIP2Q96AA8 810 aa9.99□□□□□ -0.81
CASC3-209ENST00000583902 PGBD4Q96DM1 585 aa9.99□□□□□ -0.81
CASC3-209ENST00000583902 CGRRF1Q99675 332 aa9.99□□□□□ -0.81
CASC3-209ENST00000583902 FAM213AQ9BRX8 229 aa9.99□□□□□ -0.81
CASC3-209ENST00000583902 CDT1Q9H211 546 aa9.99□□□□□ -0.81
CASC3-209ENST00000583902 VPS16Q9H269 839 aa9.99□□□□□ -0.81
CASC3-209ENST00000583902 PCIF1Q9H4Z3 704 aa9.99□□□□□ -0.81
CASC3-209ENST00000583902 ERVK-5Q9HDB9 667 aa9.99□□□□□ -0.81
CASC3-209ENST00000583902 ST3GAL5Q9UNP4 418 aa9.99□□□□□ -0.81
CASC3-209ENST00000583902 PIN4Q9Y237 131 aaKnown RBP9.99□□□□□ -0.81
CASC3-209ENST00000583902 BOLA1Q9Y3E2 137 aa9.99□□□□□ -0.81
CASC3-209ENST00000583902 NOC2LQ9Y3T9 749 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms