RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 NXPE3Q969Y0 559 aa11.47□□□□□ -0.57
SS18-221ENST00000582448 CCDC34Q96HJ3 373 aa11.47□□□□□ -0.57
SS18-221ENST00000582448 PGBD1Q96JS3 809 aa11.47□□□□□ -0.57
SS18-221ENST00000582448 CTAGE1Q96RT6 745 aa11.47□□□□□ -0.57
SS18-221ENST00000582448 PIGSQ96S52 555 aa11.47□□□□□ -0.57
SS18-221ENST00000582448 C17orf80Q9BSJ5 609 aa11.47□□□□□ -0.57
SS18-221ENST00000582448 DACT1Q9NYF0 836 aa11.47□□□□□ -0.57
SS18-221ENST00000582448 GTF2IRD1Q9UHL9 959 aa11.47□□□□□ -0.57
SS18-221ENST00000582448 ESYT2A0FGR8 921 aa11.46□□□□□ -0.57
SS18-221ENST00000582448 FSD2A1L4K1 749 aa11.46□□□□□ -0.57
SS18-221ENST00000582448 SMCO2A6NFE2 343 aa11.46□□□□□ -0.57
SS18-221ENST00000582448 PRR33A8MZF0 331 aa11.46□□□□□ -0.57
SS18-221ENST00000582448 H3BQ06 376 aaPredicted RBP11.46□□□□□ -0.57
SS18-221ENST00000582448 STXBP3O00186 592 aa11.46□□□□□ -0.57
SS18-221ENST00000582448 ZBTB5O15062 677 aa11.46□□□□□ -0.57
SS18-221ENST00000582448 DDX3YO15523 660 aaKnown RBP11.46□□□□□ -0.57
SS18-221ENST00000582448 CYTH3O43739 400 aa11.46□□□□□ -0.57
SS18-221ENST00000582448 PARNO95453 639 aaKnown RBP11.46□□□□□ -0.57
SS18-221ENST00000582448 CXCL10P02778 98 aa11.46□□□□□ -0.57
SS18-221ENST00000582448 ZNF286BP0CG31 522 aa11.46□□□□□ -0.57
SS18-221ENST00000582448 CCDC192P0DO97 292 aa11.46□□□□□ -0.57
SS18-221ENST00000582448 LIG1P18858 919 aa11.46□□□□□ -0.57
SS18-221ENST00000582448 CMA1P23946 247 aa11.46□□□□□ -0.57
SS18-221ENST00000582448 ARHGAP1Q07960 439 aa11.46□□□□□ -0.57
SS18-221ENST00000582448 STXBP2Q15833 593 aa11.46□□□□□ -0.57
SS18-221ENST00000582448 TTC38Q5R3I4 469 aa11.46□□□□□ -0.57
SS18-221ENST00000582448 ARHGEF16Q5VV41 709 aa11.46□□□□□ -0.57
SS18-221ENST00000582448 CCDC62Q6P9F0 684 aa11.46□□□□□ -0.57
SS18-221ENST00000582448 SASS6Q6UVJ0 657 aa11.46□□□□□ -0.57
SS18-221ENST00000582448 DHX37Q8IY37 1157 aaKnown RBP11.46□□□□□ -0.57
SS18-221ENST00000582448 ADGRF4Q8IZF3 695 aa11.46□□□□□ -0.57
SS18-221ENST00000582448 AGGF1Q8N302 714 aaeCLIP11.46□□□□□ -0.57
SS18-221ENST00000582448 TMEM130Q8N3G9 435 aa11.46□□□□□ -0.57
SS18-221ENST00000582448 CLSTN2Q9H4D0 955 aa11.46□□□□□ -0.57
SS18-221ENST00000582448 AKTIPQ9H8T0 292 aa11.46□□□□□ -0.57
SS18-221ENST00000582448 GRPEL1Q9HAV7 217 aa11.46□□□□□ -0.57
SS18-221ENST00000582448 HOOK1Q9UJC3 728 aaKnown RBP11.46□□□□□ -0.57
SS18-221ENST00000582448 PNMA2Q9UL42 364 aa11.46□□□□□ -0.57
SS18-221ENST00000582448 SOX13Q9UN79 622 aa11.46□□□□□ -0.57
SS18-221ENST00000582448 TRIP12Q14669 1992 aaPredicted RBP11.46□□□□□ -0.58
SS18-221ENST00000582448 SCN10AQ9Y5Y9 1956 aa11.45□□□□□ -0.58
SS18-221ENST00000582448 LCTP09848 1927 aa11.45□□□□□ -0.58
SS18-221ENST00000582448 EFCAB14O75071 495 aa11.45□□□□□ -0.58
SS18-221ENST00000582448 ALADP13716 330 aa11.45□□□□□ -0.58
SS18-221ENST00000582448 EDN3P14138 238 aa11.45□□□□□ -0.58
SS18-221ENST00000582448 MARCKSP29966 332 aaPredicted RBP11.45□□□□□ -0.58
SS18-221ENST00000582448 CD68P34810 354 aaPredicted RBP11.45□□□□□ -0.58
SS18-221ENST00000582448 ADCY7P51828 1080 aa11.45□□□□□ -0.58
SS18-221ENST00000582448 KIAA0753Q2KHM9 967 aa11.45□□□□□ -0.58
SS18-221ENST00000582448 MCTP2Q6DN12 878 aa11.45□□□□□ -0.58
SS18-221ENST00000582448 PIK3AP1Q6ZUJ8 805 aa11.45□□□□□ -0.58
SS18-221ENST00000582448 SESTD1Q86VW0 696 aa11.45□□□□□ -0.58
SS18-221ENST00000582448 REXO1Q8N1G1 1221 aaKnown RBP11.45□□□□□ -0.58
SS18-221ENST00000582448 DBF4BQ8NFT6 615 aa11.45□□□□□ -0.58
SS18-221ENST00000582448 SYTL5Q8TDW5 730 aaPredicted RBP11.45□□□□□ -0.58
SS18-221ENST00000582448 NSUN6Q8TEA1 469 aaKnown RBP11.45□□□□□ -0.58
SS18-221ENST00000582448 WNT8BQ93098 351 aa11.45□□□□□ -0.58
SS18-221ENST00000582448 KLHDC7BQ96G42 594 aa11.45□□□□□ -0.58
SS18-221ENST00000582448 RMDN3Q96TC7 470 aa11.45□□□□□ -0.58
SS18-221ENST00000582448 SDF4Q9BRK5 362 aa11.45□□□□□ -0.58
SS18-221ENST00000582448 KATNAL1Q9BW62 490 aa11.45□□□□□ -0.58
SS18-221ENST00000582448 ZMYND12Q9H0C1 365 aa11.45□□□□□ -0.58
SS18-221ENST00000582448 JMJD4Q9H9V9 463 aa11.45□□□□□ -0.58
SS18-221ENST00000582448 INSL6Q9Y581 213 aa11.45□□□□□ -0.58
SS18-221ENST00000582448 MRVI1Q9Y6F6 885 aa11.45□□□□□ -0.58
SS18-221ENST00000582448 MORC2Q9Y6X9 1032 aaPredicted RBP11.45□□□□□ -0.58
SS18-221ENST00000582448 H3BRJ5 948 aa11.44□□□□□ -0.58
SS18-221ENST00000582448 AMHP03971 560 aa11.44□□□□□ -0.58
SS18-221ENST00000582448 H2AFB1P0C5Y9 115 aa11.44□□□□□ -0.58
SS18-221ENST00000582448 H2AFB2P0C5Z0 115 aa11.44□□□□□ -0.58
SS18-221ENST00000582448 MYCLP12524 364 aaPredicted RBP11.44□□□□□ -0.58
SS18-221ENST00000582448 THPOP40225 353 aa11.44□□□□□ -0.58
SS18-221ENST00000582448 NONOQ15233 471 aaKnown RBP eCLIP11.44□□□□□ -0.58
SS18-221ENST00000582448 PTPAQ15257 358 aa11.44□□□□□ -0.58
SS18-221ENST00000582448 CDC37Q16543 378 aaPredicted RBP11.44□□□□□ -0.58
SS18-221ENST00000582448 CAMK4Q16566 473 aa11.44□□□□□ -0.58
SS18-221ENST00000582448 PTPROQ16827 1216 aa11.44□□□□□ -0.58
SS18-221ENST00000582448 HGSNATQ68CP4 663 aa11.44□□□□□ -0.58
SS18-221ENST00000582448 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.44□□□□□ -0.58
SS18-221ENST00000582448 CUL5Q93034 780 aa11.44□□□□□ -0.58
SS18-221ENST00000582448 FAM129BQ96TA1 746 aa11.44□□□□□ -0.58
SS18-221ENST00000582448 COL20A1Q9P218 1284 aa11.44□□□□□ -0.58
SS18-221ENST00000582448 DDX41Q9UJV9 622 aaKnown RBP11.44□□□□□ -0.58
SS18-221ENST00000582448 PCDHB6Q9Y5E3 794 aa11.44□□□□□ -0.58
SS18-221ENST00000582448 A0A1B0GVL5 298 aa11.43□□□□□ -0.58
SS18-221ENST00000582448 RSPH10B2B2RC85 870 aa11.43□□□□□ -0.58
SS18-221ENST00000582448 ADAM11O75078 769 aa11.43□□□□□ -0.58
SS18-221ENST00000582448 CSPG5O95196 566 aa11.43□□□□□ -0.58
SS18-221ENST00000582448 CAVIN2O95810 425 aa11.43□□□□□ -0.58
SS18-221ENST00000582448 CFBP00751 764 aa11.43□□□□□ -0.58
SS18-221ENST00000582448 RSPH10BP0C881 870 aa11.43□□□□□ -0.58
SS18-221ENST00000582448 TOB1P50616 345 aaPredicted RBP11.43□□□□□ -0.58
SS18-221ENST00000582448 ORC2Q13416 577 aaPredicted RBP11.43□□□□□ -0.58
SS18-221ENST00000582448 GPM6BQ13491 265 aa11.43□□□□□ -0.58
SS18-221ENST00000582448 EPC2Q52LR7 807 aa11.43□□□□□ -0.58
SS18-221ENST00000582448 TCEAL5Q5H9L2 206 aa11.43□□□□□ -0.58
SS18-221ENST00000582448 MCF2L2Q86YR7 1114 aa11.43□□□□□ -0.58
SS18-221ENST00000582448 MRPL38Q96DV4 380 aaKnown RBP11.43□□□□□ -0.58
SS18-221ENST00000582448 IWS1Q96ST2 819 aa11.43□□□□□ -0.58
SS18-221ENST00000582448 YME1L1Q96TA2 773 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms