RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 MAST4O15021 2626 aa10.35□□□□□ -0.75
GGA3-212ENST00000582376 NOTCH4Q99466 2003 aa10.34□□□□□ -0.75
GGA3-212ENST00000582376 CCDC163A0A0D9SF12 145 aa10.34□□□□□ -0.75
GGA3-212ENST00000582376 hCG_1642624A0A1W2PR95 340 aa10.34□□□□□ -0.75
GGA3-212ENST00000582376 ARL5CA6NH57 179 aa10.34□□□□□ -0.75
GGA3-212ENST00000582376 CYSRT1A8MQ03 144 aa10.34□□□□□ -0.75
GGA3-212ENST00000582376 TADA2AO75478 443 aa10.34□□□□□ -0.75
GGA3-212ENST00000582376 AKAP3O75969 853 aa10.34□□□□□ -0.75
GGA3-212ENST00000582376 SEC24BO95487 1268 aa10.34□□□□□ -0.75
GGA3-212ENST00000582376 CEBPBP17676 345 aa10.34□□□□□ -0.75
GGA3-212ENST00000582376 HOXC13P31276 330 aa10.34□□□□□ -0.75
GGA3-212ENST00000582376 MLH1P40692 756 aa10.34□□□□□ -0.75
GGA3-212ENST00000582376 MLLT6P55198 1093 aaPredicted RBP10.34□□□□□ -0.75
GGA3-212ENST00000582376 HNRNPUQ00839 825 aaKnown RBP eCLIP10.34□□□□□ -0.75
GGA3-212ENST00000582376 TARBP2Q15633 366 aaKnown RBP10.34□□□□□ -0.75
GGA3-212ENST00000582376 PSMD5Q16401 504 aa10.34□□□□□ -0.75
GGA3-212ENST00000582376 FAM78AQ5JUQ0 283 aa10.34□□□□□ -0.75
GGA3-212ENST00000582376 ANKRD45Q5TZF3 282 aa10.34□□□□□ -0.75
GGA3-212ENST00000582376 POTEHQ6S545 545 aa10.34□□□□□ -0.75
GGA3-212ENST00000582376 RALYLQ86SE5 291 aaKnown RBP10.34□□□□□ -0.75
GGA3-212ENST00000582376 TEX2Q8IWB9 1127 aa10.34□□□□□ -0.75
GGA3-212ENST00000582376 CMTR1Q8N1G2 835 aaKnown RBP10.34□□□□□ -0.75
GGA3-212ENST00000582376 PIK3R5Q8WYR1 880 aa10.34□□□□□ -0.75
GGA3-212ENST00000582376 ZC3H10Q96K80 434 aaKnown RBP10.34□□□□□ -0.75
GGA3-212ENST00000582376 TTPALQ9BTX7 342 aa10.34□□□□□ -0.75
GGA3-212ENST00000582376 RIC8AQ9NPQ8 531 aa10.34□□□□□ -0.75
GGA3-212ENST00000582376 TMEM9BQ9NQ34 198 aa10.34□□□□□ -0.75
GGA3-212ENST00000582376 AVENQ9NQS1 362 aaPredicted RBP10.34□□□□□ -0.75
GGA3-212ENST00000582376 MIOSQ9NXC5 875 aa10.34□□□□□ -0.75
GGA3-212ENST00000582376 SUCLA2Q9P2R7 463 aaPredicted RBP10.34□□□□□ -0.75
GGA3-212ENST00000582376 SF3B1O75533 1304 aaKnown RBP eCLIP10.33□□□□□ -0.76
GGA3-212ENST00000582376 TICRRQ7Z2Z1 1910 aa10.33□□□□□ -0.76
GGA3-212ENST00000582376 IGLV3-22A0A075B6J6 115 aa10.33□□□□□ -0.76
GGA3-212ENST00000582376 IGKV6-21A0A0C4DH24 114 aa10.33□□□□□ -0.76
GGA3-212ENST00000582376 WDR64B1ANS9 1081 aa10.33□□□□□ -0.76
GGA3-212ENST00000582376 ZNF263O14978 683 aa10.33□□□□□ -0.76
GGA3-212ENST00000582376 CAVIN2O95810 425 aa10.33□□□□□ -0.76
GGA3-212ENST00000582376 PXNP49023 591 aaPredicted RBP10.33□□□□□ -0.76
GGA3-212ENST00000582376 FGD1P98174 961 aa10.33□□□□□ -0.76
GGA3-212ENST00000582376 SETQ01105 290 aaPredicted RBP10.33□□□□□ -0.76
GGA3-212ENST00000582376 CREB5Q02930 508 aa10.33□□□□□ -0.76
GGA3-212ENST00000582376 C19orf57Q0VDD7 668 aa10.33□□□□□ -0.76
GGA3-212ENST00000582376 AP3B2Q13367 1082 aa10.33□□□□□ -0.76
GGA3-212ENST00000582376 PLK5Q496M5 336 aa10.33□□□□□ -0.76
GGA3-212ENST00000582376 MTERF2Q49AM1 385 aa10.33□□□□□ -0.76
GGA3-212ENST00000582376 VITQ6UXI7 678 aa10.33□□□□□ -0.76
GGA3-212ENST00000582376 RTL10Q7L3V2 364 aa10.33□□□□□ -0.76
GGA3-212ENST00000582376 CEP57Q86XR8 500 aa10.33□□□□□ -0.76
GGA3-212ENST00000582376 KSR1Q8IVT5 923 aa10.33□□□□□ -0.76
GGA3-212ENST00000582376 SMG8Q8ND04 991 aaKnown RBP10.33□□□□□ -0.76
GGA3-212ENST00000582376 DEFB124Q8NES8 71 aa10.33□□□□□ -0.76
GGA3-212ENST00000582376 LNX1Q8TBB1 728 aaPredicted RBP10.33□□□□□ -0.76
GGA3-212ENST00000582376 CSGALNACT1Q8TDX6 532 aa10.33□□□□□ -0.76
GGA3-212ENST00000582376 DEPDC1BQ8WUY9 529 aa10.33□□□□□ -0.76
GGA3-212ENST00000582376 MKNK1Q9BUB5 465 aa10.33□□□□□ -0.76
GGA3-212ENST00000582376 APOL6Q9BWW8 343 aa10.33□□□□□ -0.76
GGA3-212ENST00000582376 RNF39Q9H2S5 420 aa10.33□□□□□ -0.76
GGA3-212ENST00000582376 C8orf33Q9H7E9 229 aaPredicted RBP10.33□□□□□ -0.76
GGA3-212ENST00000582376 CACNA2D2Q9NY47 1150 aa10.33□□□□□ -0.76
GGA3-212ENST00000582376 IPPQ9Y573 584 aa10.33□□□□□ -0.76
GGA3-212ENST00000582376 WDR81Q562E7 1941 aa10.33□□□□□ -0.76
GGA3-212ENST00000582376 HELZ2Q9BYK8 2649 aaKnown RBP10.32□□□□□ -0.76
GGA3-212ENST00000582376 LNP1A1A4G5 178 aa10.32□□□□□ -0.76
GGA3-212ENST00000582376 ADAM12O43184 909 aa10.32□□□□□ -0.76
GGA3-212ENST00000582376 CAPNS1P04632 268 aa10.32□□□□□ -0.76
GGA3-212ENST00000582376 HOXA11P31270 313 aaPredicted RBP10.32□□□□□ -0.76
GGA3-212ENST00000582376 ADCY7P51828 1080 aa10.32□□□□□ -0.76
GGA3-212ENST00000582376 KPNA1P52294 538 aaPredicted RBP10.32□□□□□ -0.76
GGA3-212ENST00000582376 NAPAP54920 295 aa10.32□□□□□ -0.76
GGA3-212ENST00000582376 ELF2Q15723 593 aa10.32□□□□□ -0.76
GGA3-212ENST00000582376 UGCGQ16739 394 aa10.32□□□□□ -0.76
GGA3-212ENST00000582376 CCDC82Q8N4S0 544 aa10.32□□□□□ -0.76
GGA3-212ENST00000582376 NCOA7Q8NI08 942 aa10.32□□□□□ -0.76
GGA3-212ENST00000582376 FAM200AQ8TCP9 573 aa10.32□□□□□ -0.76
GGA3-212ENST00000582376 IGDCC4Q8TDY8 1250 aa10.32□□□□□ -0.76
GGA3-212ENST00000582376 RABGGTAQ92696 567 aa10.32□□□□□ -0.76
GGA3-212ENST00000582376 ZFP42Q96MM3 310 aa10.32□□□□□ -0.76
GGA3-212ENST00000582376 ASB16Q96NS5 453 aa10.32□□□□□ -0.76
GGA3-212ENST00000582376 SLC32A1Q9H598 525 aa10.32□□□□□ -0.76
GGA3-212ENST00000582376 IFT122Q9HBG6 1241 aa10.32□□□□□ -0.76
GGA3-212ENST00000582376 DISC1Q9NRI5 854 aa10.32□□□□□ -0.76
GGA3-212ENST00000582376 SEPT9Q9UHD8 586 aaPredicted RBP10.32□□□□□ -0.76
GGA3-212ENST00000582376 PCDHB15Q9Y5E8 787 aa10.32□□□□□ -0.76
GGA3-212ENST00000582376 BCLAF3A2AJT9 711 aaKnown RBP10.31□□□□□ -0.76
GGA3-212ENST00000582376 HIP1O00291 1037 aa10.31□□□□□ -0.76
GGA3-212ENST00000582376 NRG2O14511 850 aaPredicted RBP10.31□□□□□ -0.76
GGA3-212ENST00000582376 KHNYNO15037 678 aaKnown RBP10.31□□□□□ -0.76
GGA3-212ENST00000582376 EXTL3O43909 919 aa10.31□□□□□ -0.76
GGA3-212ENST00000582376 RHOBTB1O94844 696 aa10.31□□□□□ -0.76
GGA3-212ENST00000582376 CYP3A4P08684 503 aa10.31□□□□□ -0.76
GGA3-212ENST00000582376 PTPN2P17706 415 aa10.31□□□□□ -0.76
GGA3-212ENST00000582376 RDXP35241 583 aaKnown RBP10.31□□□□□ -0.76
GGA3-212ENST00000582376 RAB33AQ14088 237 aa10.31□□□□□ -0.76
GGA3-212ENST00000582376 HSP90AA2PQ14568 343 aaPredicted RBP10.31□□□□□ -0.76
GGA3-212ENST00000582376 UAP1L1Q3KQV9 507 aa10.31□□□□□ -0.76
GGA3-212ENST00000582376 WDR44Q5JSH3 913 aa10.31□□□□□ -0.76
GGA3-212ENST00000582376 PRSS36Q5K4E3 855 aa10.31□□□□□ -0.76
GGA3-212ENST00000582376 FAM171A1Q5VUB5 890 aa10.31□□□□□ -0.76
GGA3-212ENST00000582376 WWC2Q6AWC2 1192 aa10.31□□□□□ -0.76
GGA3-212ENST00000582376 PPP1R18Q6NYC8 613 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms