RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 FILIP1Q7Z7B0 1213 aa10.39□□□□□ -0.75
RFFL-210ENST00000582308 MRPL10Q7Z7H8 261 aaKnown RBP10.39□□□□□ -0.75
RFFL-210ENST00000582308 THNSL1Q8IYQ7 743 aa10.39□□□□□ -0.75
RFFL-210ENST00000582308 RPUSD2Q8IZ73 545 aaKnown RBP10.39□□□□□ -0.75
RFFL-210ENST00000582308 GPD1LQ8N335 351 aa10.39□□□□□ -0.75
RFFL-210ENST00000582308 RDH13Q8NBN7 331 aa10.39□□□□□ -0.75
RFFL-210ENST00000582308 NOC3LQ8WTT2 800 aaKnown RBP10.39□□□□□ -0.75
RFFL-210ENST00000582308 FTHL17Q9BXU8 183 aa10.39□□□□□ -0.75
RFFL-210ENST00000582308 NXF3Q9H4D5 531 aaKnown RBP10.39□□□□□ -0.75
RFFL-210ENST00000582308 THAP9Q9H5L6 903 aa10.39□□□□□ -0.75
RFFL-210ENST00000582308 IL23AQ9NPF7 189 aa10.39□□□□□ -0.75
RFFL-210ENST00000582308 RGS18Q9NS28 235 aa10.39□□□□□ -0.75
RFFL-210ENST00000582308 FAM105AQ9NUU6 356 aa10.39□□□□□ -0.75
RFFL-210ENST00000582308 SNTG2Q9NY99 539 aa10.39□□□□□ -0.75
RFFL-210ENST00000582308 CPSF3Q9UKF6 684 aaKnown RBP10.39□□□□□ -0.75
RFFL-210ENST00000582308 FRMD4BQ9Y2L6 1034 aa10.39□□□□□ -0.75
RFFL-210ENST00000582308 HES2Q9Y543 173 aa10.39□□□□□ -0.75
RFFL-210ENST00000582308 IPPQ9Y573 584 aa10.39□□□□□ -0.75
RFFL-210ENST00000582308 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.38□□□□□ -0.75
RFFL-210ENST00000582308 ZNF233A6NK53 670 aa10.38□□□□□ -0.75
RFFL-210ENST00000582308 MEIS3P2A8K0S8 358 aa10.38□□□□□ -0.75
RFFL-210ENST00000582308 MAPK13O15264 365 aa10.38□□□□□ -0.75
RFFL-210ENST00000582308 FGFR1OPO95684 399 aaKnown RBP10.38□□□□□ -0.75
RFFL-210ENST00000582308 LDHAP00338 332 aaKnown RBP10.38□□□□□ -0.75
RFFL-210ENST00000582308 CLTAP09496 248 aa10.38□□□□□ -0.75
RFFL-210ENST00000582308 EPB41P11171 864 aaKnown RBP10.38□□□□□ -0.75
RFFL-210ENST00000582308 PSMC2P35998 433 aaKnown RBP10.38□□□□□ -0.75
RFFL-210ENST00000582308 WNT7BP56706 349 aa10.38□□□□□ -0.75
RFFL-210ENST00000582308 FPGSQ05932 587 aa10.38□□□□□ -0.75
RFFL-210ENST00000582308 CYP24A1Q07973 514 aa10.38□□□□□ -0.75
RFFL-210ENST00000582308 PPIGQ13427 754 aaKnown RBP eCLIP10.38□□□□□ -0.759e-12■■■■□ 24.8
RFFL-210ENST00000582308 ENOX2Q16206 610 aaKnown RBP10.38□□□□□ -0.75
RFFL-210ENST00000582308 KYAT1Q16773 422 aa10.38□□□□□ -0.75
RFFL-210ENST00000582308 SLC10A6Q3KNW5 377 aa10.38□□□□□ -0.75
RFFL-210ENST00000582308 SLC24A5Q71RS6 500 aa10.38□□□□□ -0.75
RFFL-210ENST00000582308 ZNF598Q86UK7 904 aaKnown RBP10.38□□□□□ -0.75
RFFL-210ENST00000582308 ECHDC2Q86YB7 292 aa10.38□□□□□ -0.75
RFFL-210ENST00000582308 FAM186BQ8IYM0 893 aa10.38□□□□□ -0.75
RFFL-210ENST00000582308 PLEKHO2Q8TD55 490 aa10.38□□□□□ -0.75
RFFL-210ENST00000582308 LPPQ93052 612 aa10.38□□□□□ -0.75
RFFL-210ENST00000582308 MFSD14AQ96MC6 490 aa10.38□□□□□ -0.75
RFFL-210ENST00000582308 MKNK1Q9BUB5 465 aa10.38□□□□□ -0.75
RFFL-210ENST00000582308 TRIM6Q9C030 488 aaPredicted RBP10.38□□□□□ -0.75
RFFL-210ENST00000582308 CXCL16Q9H2A7 254 aa10.38□□□□□ -0.75
RFFL-210ENST00000582308 RNF39Q9H2S5 420 aa10.38□□□□□ -0.75
RFFL-210ENST00000582308 KIAA1586Q9HCI6 787 aa10.38□□□□□ -0.75
RFFL-210ENST00000582308 ABHD14A-ACY1A0A1B0GW23 586 aa10.37□□□□□ -0.75
RFFL-210ENST00000582308 KCNJ18B7U540 433 aa10.37□□□□□ -0.75
RFFL-210ENST00000582308 SLC16A3O15427 465 aaKnown RBP10.37□□□□□ -0.75
RFFL-210ENST00000582308 RECQL4O94761 1208 aa10.37□□□□□ -0.75
RFFL-210ENST00000582308 GNA14O95837 355 aa10.37□□□□□ -0.75
RFFL-210ENST00000582308 PFKMP08237 780 aa10.37□□□□□ -0.75
RFFL-210ENST00000582308 CXCL8P10145 99 aa10.37□□□□□ -0.75
RFFL-210ENST00000582308 ATP1A3P13637 1013 aa10.37□□□□□ -0.75
RFFL-210ENST00000582308 AKAP5P24588 427 aa10.37□□□□□ -0.75
RFFL-210ENST00000582308 RAB27AP51159 221 aa10.37□□□□□ -0.75
RFFL-210ENST00000582308 MARSP56192 900 aaKnown RBP10.37□□□□□ -0.75
RFFL-210ENST00000582308 MCCD1P59942 119 aaPredicted RBP10.37□□□□□ -0.75
RFFL-210ENST00000582308 IKBKEQ14164 716 aa10.37□□□□□ -0.75
RFFL-210ENST00000582308 KCNJ12Q14500 433 aa10.37□□□□□ -0.75
RFFL-210ENST00000582308 TCP11X2Q5H9J9 407 aa10.37□□□□□ -0.75
RFFL-210ENST00000582308 TMEM240Q5SV17 173 aa10.37□□□□□ -0.75
RFFL-210ENST00000582308 ALKAL1Q6UXT8 129 aa10.37□□□□□ -0.75
RFFL-210ENST00000582308 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.37□□□□□ -0.75
RFFL-210ENST00000582308 AGMOQ6ZNB7 445 aa10.37□□□□□ -0.75
RFFL-210ENST00000582308 ZNF365Q70YC5 407 aa10.37□□□□□ -0.75
RFFL-210ENST00000582308 FRMD5Q7Z6J6 570 aa10.37□□□□□ -0.75
RFFL-210ENST00000582308 BRSK2Q8IWQ3 736 aa10.37□□□□□ -0.75
RFFL-210ENST00000582308 CRIPAKQ8N1N5 446 aa10.37□□□□□ -0.75
RFFL-210ENST00000582308 CNOT6LQ96LI5 555 aaKnown RBP10.37□□□□□ -0.75
RFFL-210ENST00000582308 ACAP3Q96P50 834 aa10.37□□□□□ -0.75
RFFL-210ENST00000582308 CCDC94Q9BW85 323 aaPredicted RBP10.37□□□□□ -0.75
RFFL-210ENST00000582308 APOL6Q9BWW8 343 aa10.37□□□□□ -0.75
RFFL-210ENST00000582308 RPF1Q9H9Y2 349 aaKnown RBP10.37□□□□□ -0.75
RFFL-210ENST00000582308 C1orf112Q9NSG2 853 aa10.37□□□□□ -0.75
RFFL-210ENST00000582308 RBAKQ9NYW8 714 aaPredicted RBP10.37□□□□□ -0.75
RFFL-210ENST00000582308 ARMCX3Q9UH62 379 aaPredicted RBP10.37□□□□□ -0.75
RFFL-210ENST00000582308 NR2E3Q9Y5X4 410 aa10.37□□□□□ -0.75
RFFL-210ENST00000582308 SCN1AP35498 2009 aa10.36□□□□□ -0.75
RFFL-210ENST00000582308 TTC26A0AVF1 554 aa10.36□□□□□ -0.75
RFFL-210ENST00000582308 LACTBL1A8MY62 500 aa10.36□□□□□ -0.75
RFFL-210ENST00000582308 GOLGA6L19H0YKK7 550 aa10.36□□□□□ -0.75
RFFL-210ENST00000582308 EOMESO95936 686 aa10.36□□□□□ -0.75
RFFL-210ENST00000582308 SKIP12755 728 aa10.36□□□□□ -0.75
RFFL-210ENST00000582308 ITGA4P13612 1032 aa10.36□□□□□ -0.75
RFFL-210ENST00000582308 IBSPP21815 317 aaPredicted RBP10.36□□□□□ -0.75
RFFL-210ENST00000582308 RGS19P49795 217 aa10.36□□□□□ -0.75
RFFL-210ENST00000582308 POU5F1Q01860 360 aaKnown RBP10.36□□□□□ -0.75
RFFL-210ENST00000582308 HSP90AA2PQ14568 343 aaPredicted RBP10.36□□□□□ -0.75
RFFL-210ENST00000582308 PSMD6Q15008 389 aa10.36□□□□□ -0.75
RFFL-210ENST00000582308 CCDC40Q4G0X9 1142 aa10.36□□□□□ -0.75
RFFL-210ENST00000582308 C1orf220Q5T0J3 134 aa10.36□□□□□ -0.75
RFFL-210ENST00000582308 APTXQ7Z2E3 356 aaKnown RBP10.36□□□□□ -0.75
RFFL-210ENST00000582308 CREBRFQ8IUR6 639 aa10.36□□□□□ -0.75
RFFL-210ENST00000582308 FAM114A1Q8IWE2 563 aa10.36□□□□□ -0.75
RFFL-210ENST00000582308 TRIM59Q8IWR1 403 aa10.36□□□□□ -0.75
RFFL-210ENST00000582308 RNF169Q8NCN4 708 aa10.36□□□□□ -0.75
RFFL-210ENST00000582308 TMC2Q8TDI7 906 aa10.36□□□□□ -0.75
RFFL-210ENST00000582308 PARD3BQ8TEW8 1205 aa10.36□□□□□ -0.75
RFFL-210ENST00000582308 CCDC127Q96BQ5 260 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms