RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 TTC39CQ8N584 583 aa15.35■□□□□ 0.05
CSNK1D-217ENST00000581241 SGSM3Q96HU1 749 aa15.35■□□□□ 0.05
CSNK1D-217ENST00000581241 MMTAG2Q9BU76 263 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-217ENST00000581241 ROPN1BQ9BZX4 212 aaPredicted RBP15.35■□□□□ 0.05
CSNK1D-217ENST00000581241 ROPN1Q9HAT0 212 aaPredicted RBP15.35■□□□□ 0.05
CSNK1D-217ENST00000581241 STAP1Q9ULZ2 295 aa15.35■□□□□ 0.05
CSNK1D-217ENST00000581241 SUPT20HL1Q3ZLR7 823 aa15.35■□□□□ 0.05
CSNK1D-217ENST00000581241 UNC45AQ9H3U1 944 aa15.35■□□□□ 0.05
CSNK1D-217ENST00000581241 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.35■□□□□ 0.05
CSNK1D-217ENST00000581241 TRPM1Q7Z4N2 1603 aa15.35■□□□□ 0.05
CSNK1D-217ENST00000581241 ANGPT2O15123 496 aa15.35■□□□□ 0.05
CSNK1D-217ENST00000581241 P4HBP07237 508 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-217ENST00000581241 KRT76Q01546 638 aa15.35■□□□□ 0.05
CSNK1D-217ENST00000581241 TSGA10IPQ3SY00 556 aa15.35■□□□□ 0.05
CSNK1D-217ENST00000581241 RC3H1Q5TC82 1133 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-217ENST00000581241 SUSD4Q5VX71 490 aa15.35■□□□□ 0.05
CSNK1D-217ENST00000581241 LRRC31Q6UY01 552 aa15.35■□□□□ 0.05
CSNK1D-217ENST00000581241 PPHLN1Q8NEY8 458 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-217ENST00000581241 LZICQ8WZA0 190 aa15.35■□□□□ 0.05
CSNK1D-217ENST00000581241 C2orf40Q9H1Z8 148 aa15.35■□□□□ 0.05
CSNK1D-217ENST00000581241 SRP72O76094 671 aaKnown RBP15.35■□□□□ 0.05
CSNK1D-217ENST00000581241 PLD3Q8IV08 490 aa15.35■□□□□ 0.05
CSNK1D-217ENST00000581241 APLFQ8IW19 511 aaPredicted RBP15.35■□□□□ 0.05
CSNK1D-217ENST00000581241 COA1Q9GZY4 146 aa15.35■□□□□ 0.05
CSNK1D-217ENST00000581241 POLR3FQ9H1D9 316 aaPredicted RBP15.35■□□□□ 0.05
CSNK1D-217ENST00000581241 BFARQ9NZS9 450 aa15.35■□□□□ 0.05
CSNK1D-217ENST00000581241 ADGRL3Q9HAR2 1447 aa15.35■□□□□ 0.05
CSNK1D-217ENST00000581241 FAM47DPA6NHR8 397 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 USP17L10C9JJH3 530 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 RABGAP1LQ5R372 815 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 RNF135Q8IUD6 432 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 CCDC134Q9H6E4 229 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 ZNF302Q9NR11 478 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 LMCD1Q9NZU5 365 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 CCT8L1PA6NM43 557 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 KLHL2O95198 593 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 CORO7P57737 925 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 OLFML2BQ68BL8 750 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 PATL1Q86TB9 770 aaKnown RBP15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 KCNK16Q96T55 309 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 EIF2AK1Q9BQI3 630 aaKnown RBP15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 A0A1W2PQJ5 194 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 HUS1O60921 280 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 FMR1Q06787 632 aaKnown RBP eCLIP15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 AGR3Q8TD06 166 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 LZTS1Q9Y250 596 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 SERPINB9P50453 376 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 STX3Q13277 289 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 KRT72Q14CN4 511 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 TRIM60Q495X7 471 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 RCSD1Q6JBY9 416 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 BTNL9Q6UXG8 535 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 ZIM3Q96PE6 472 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 ZNF341Q9BYN7 854 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 SARS2Q9NP81 518 aaKnown RBP15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 PALLDQ8WX93 1383 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 SSU72P8A0A1W2PR75 194 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 PDXKO00764 312 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 PTGISQ16647 500 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 KIAA1841Q6NSI8 718 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 ACAP3Q96P50 834 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 CHP1Q99653 195 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 EGFL8Q99944 293 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 SP110Q9HB58 689 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 PAIP2BQ9ULR5 123 aaKnown RBP15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 METP08581 1390 aa15.34■□□□□ 0.05
CSNK1D-217ENST00000581241 ENO4A6NNW6 628 aa15.33■□□□□ 0.05
CSNK1D-217ENST00000581241 GOLGA8RI6L899 631 aa15.33■□□□□ 0.05
CSNK1D-217ENST00000581241 CATSPER4Q7RTX7 472 aa15.33■□□□□ 0.05
CSNK1D-217ENST00000581241 MRPL1Q9BYD6 325 aaKnown RBP15.33■□□□□ 0.05
CSNK1D-217ENST00000581241 RBM12Q9NTZ6 932 aaKnown RBP15.33■□□□□ 0.05
CSNK1D-217ENST00000581241 SEPT3Q9UH03 358 aa15.33■□□□□ 0.05
CSNK1D-217ENST00000581241 USP17L15C9J2P7 530 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 USP17L13C9JLJ4 530 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 USP17L11C9JVI0 530 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 USP17L18D6R9N7 530 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 USP17L22D6RA61 530 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 USP17L17D6RBQ6 530 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 USP17L19D6RCP7 530 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 USP17L20D6RJB6 530 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 GFAPP14136 432 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 MRPS35P82673 323 aaKnown RBP15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 USP17L24Q0WX57 530 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 FAM102AQ5T9C2 384 aaPredicted RBP15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 USP17L6PQ6QN14 398 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 MIGA2Q7L4E1 593 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 PPP1R36Q96LQ0 422 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 AP3B1O00203 1094 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 HSPA1AP0DMV8 641 aaKnown RBP15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 HSPA1BP0DMV9 641 aaKnown RBP15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 PMS1P54277 932 aaKnown RBP15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 CDH6P55285 790 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 STXBP2Q15833 593 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 ADGRF4Q8IZF3 695 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 RIBC1Q8N443 379 aaPredicted RBP15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 EPAS1Q99814 870 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 STK33Q9BYT3 514 aa15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 DHX35Q9H5Z1 703 aaKnown RBP15.33■□□□□ 0.04
CSNK1D-217ENST00000581241 MED14O60244 1454 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms