RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 C1orf220Q5T0J3 134 aa15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 CCDC186Q7Z3E2 898 aa15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 APBB1IPQ7Z5R6 666 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 FAM228AQ86W67 206 aa15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 FAM126BQ8IXS8 530 aa15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 CRACR2AQ9BSW2 395 aa15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 CPSF3Q9UKF6 684 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 PIN4Q9Y237 131 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.03■□□□□ -01e-7■■□□□ 13.3
CDK5RAP3-219ENST00000580670 BRCA2P51587 3418 aa15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 LRRIQ3A6PVS8 624 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 STX10O60499 249 aa15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 ATN1P54259 1190 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 OSTNP61366 133 aa15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 ENPEPQ07075 957 aa15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 TBX2Q13207 712 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 DCAF4L1Q3SXM0 396 aa15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 FAM26DQ5JW98 314 aa15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 ZNF618Q5T7W0 954 aa15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 PPFIBP1Q86W92 1011 aa15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 BRSK2Q8IWQ3 736 aa15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 CEP120Q8N960 986 aa15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 FNBP1Q96RU3 617 aa15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 POP1Q99575 1024 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 SIK3Q9Y2K2 1263 aa15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 RBAK-RBAKDNI3L0D1 243 aa15.02□□□□□ -0.01
CDK5RAP3-219ENST00000580670 N4BP1O75113 896 aaKnown RBP15.02□□□□□ -0.01
CDK5RAP3-219ENST00000580670 NPTXRO95502 500 aa15.02□□□□□ -0.01
CDK5RAP3-219ENST00000580670 CKBP12277 381 aa15.02□□□□□ -0.01
CDK5RAP3-219ENST00000580670 GCLMP48507 274 aa15.02□□□□□ -0.01
CDK5RAP3-219ENST00000580670 MYL7Q01449 175 aa15.02□□□□□ -0.01
CDK5RAP3-219ENST00000580670 PPP3CAQ08209 521 aa15.02□□□□□ -0.01
CDK5RAP3-219ENST00000580670 KCNMA1Q12791 1236 aa15.02□□□□□ -0.01
CDK5RAP3-219ENST00000580670 KYAT1Q16773 422 aa15.02□□□□□ -0.01
CDK5RAP3-219ENST00000580670 CBWD6Q4V339 395 aa15.02□□□□□ -0.01
CDK5RAP3-219ENST00000580670 CBWD3Q5JTY5 395 aa15.02□□□□□ -0.01
CDK5RAP3-219ENST00000580670 CBWD5Q5RIA9 395 aa15.02□□□□□ -0.01
CDK5RAP3-219ENST00000580670 MROH7Q68CQ1 1323 aa15.02□□□□□ -0.01
CDK5RAP3-219ENST00000580670 SLC27A1Q6PCB7 646 aa15.02□□□□□ -0.01
CDK5RAP3-219ENST00000580670 SLC39A5Q6ZMH5 540 aa15.02□□□□□ -0.01
CDK5RAP3-219ENST00000580670 GBP6Q6ZN66 633 aa15.02□□□□□ -0.01
CDK5RAP3-219ENST00000580670 DIS3LQ8TF46 1054 aaKnown RBP15.02□□□□□ -0.01
CDK5RAP3-219ENST00000580670 PDE11AQ9HCR9 933 aa15.02□□□□□ -0.01
CDK5RAP3-219ENST00000580670 PRDM10Q9NQV6 1147 aa15.02□□□□□ -0.01
CDK5RAP3-219ENST00000580670 TOPORSQ9NS56 1045 aaPredicted RBP15.02□□□□□ -0.01
CDK5RAP3-219ENST00000580670 ST3GAL5Q9UNP4 418 aa15.02□□□□□ -0.01
CDK5RAP3-219ENST00000580670 GTPBP10A4D1E9 387 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 GPR182O15218 404 aa15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 PQBP1O60828 265 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 CD4P01730 458 aa15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 CLTAP09496 248 aa15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 STAG3L1P0CL83 205 aa15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 GHRP10912 638 aa15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 TRIM21P19474 475 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 WNT7BP56706 349 aa15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 GSDMDP57764 484 aa15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 NFX1Q12986 1120 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 TRIM14Q14142 442 aa15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 EXOC3L4Q17RC7 722 aa15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 FBXO47Q5MNV8 452 aa15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 TMEM192Q8IY95 271 aa15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 ANKLE1Q8NAG6 615 aa15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 CAGE1Q8TC20 777 aa15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 CPLX3Q8WVH0 158 aa15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 FAM212AQ96EL1 285 aa15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 TMEM106CQ9BVX2 250 aa15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 LSM14BQ9BX40 385 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 EIF2AQ9BY44 585 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 RPF1Q9H9Y2 349 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 FAM207AQ9NSI2 230 aaPredicted RBP15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 GCNT4Q9P109 453 aa15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 TLR3O15455 904 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 GYPCP04921 128 aa15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 TPM1P09493 284 aa15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 TNNI1P19237 187 aa15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 GTF2H1P32780 548 aa15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 MXI1P50539 228 aa15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 RBM10P98175 930 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 RBL2Q08999 1139 aa15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 ENOX2Q16206 610 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 NEK11Q8NG66 645 aa15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 CGRRF1Q99675 332 aa15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 NUP58Q9BVL2 599 aa15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 TRIM6Q9C030 488 aaPredicted RBP15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 TMEM117Q9H0C3 514 aa15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 AGO3Q9H9G7 860 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 TMEM8AQ9HCN3 771 aa15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.01□□□□□ -0.01
CDK5RAP3-219ENST00000580670 CXCL8P10145 99 aa15□□□□□ -0.01
CDK5RAP3-219ENST00000580670 COL6A1P12109 1028 aa15□□□□□ -0.01
CDK5RAP3-219ENST00000580670 CD52P31358 61 aa15□□□□□ -0.01
CDK5RAP3-219ENST00000580670 GRM5P41594 1212 aa15□□□□□ -0.01
CDK5RAP3-219ENST00000580670 CLDN10P78369 228 aa15□□□□□ -0.01
CDK5RAP3-219ENST00000580670 GOLGA8FQ08AF8 430 aa15□□□□□ -0.01
CDK5RAP3-219ENST00000580670 GOLGA8DPQ0D2H9 430 aa15□□□□□ -0.01
CDK5RAP3-219ENST00000580670 CETN1Q12798 172 aa15□□□□□ -0.01
CDK5RAP3-219ENST00000580670 PAK2Q13177 524 aa15□□□□□ -0.01
CDK5RAP3-219ENST00000580670 BFSP2Q13515 415 aa15□□□□□ -0.01
CDK5RAP3-219ENST00000580670 LPIN1Q14693 890 aa15□□□□□ -0.01
CDK5RAP3-219ENST00000580670 ARID5BQ14865 1188 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms