RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 GJA3Q9Y6H8 435 aa11.26□□□□□ -0.61
TOP3A-209ENST00000580095 WDR64B1ANS9 1081 aa11.26□□□□□ -0.61
TOP3A-209ENST00000580095 BHMG1C9JSJ3 638 aaPredicted RBP11.26□□□□□ -0.61
TOP3A-209ENST00000580095 O00370 1275 aa11.26□□□□□ -0.61
TOP3A-209ENST00000580095 KIAA0391O15091 583 aaKnown RBP11.26□□□□□ -0.61
TOP3A-209ENST00000580095 WDR46O15213 610 aaKnown RBP11.26□□□□□ -0.61
TOP3A-209ENST00000580095 KIF1CO43896 1103 aaKnown RBP11.26□□□□□ -0.61
TOP3A-209ENST00000580095 PLA2G6O60733 806 aa11.26□□□□□ -0.61
TOP3A-209ENST00000580095 MUTP22033 750 aa11.26□□□□□ -0.61
TOP3A-209ENST00000580095 NF2P35240 595 aa11.26□□□□□ -0.61
TOP3A-209ENST00000580095 GJC1P36383 396 aa11.26□□□□□ -0.61
TOP3A-209ENST00000580095 ACOT2P49753 483 aa11.26□□□□□ -0.61
TOP3A-209ENST00000580095 PEX5P50542 639 aa11.26□□□□□ -0.61
TOP3A-209ENST00000580095 SLC29A2Q14542 456 aa11.26□□□□□ -0.61
TOP3A-209ENST00000580095 CCDC38Q502W7 563 aa11.26□□□□□ -0.61
TOP3A-209ENST00000580095 CCDC137Q6PK04 289 aaKnown RBP11.26□□□□□ -0.61
TOP3A-209ENST00000580095 TADA2BQ86TJ2 420 aa11.26□□□□□ -0.61
TOP3A-209ENST00000580095 NLRX1Q86UT6 975 aa11.26□□□□□ -0.61
TOP3A-209ENST00000580095 FAM83AQ86UY5 434 aa11.26□□□□□ -0.61
TOP3A-209ENST00000580095 UBL4BQ8N7F7 174 aa11.26□□□□□ -0.61
TOP3A-209ENST00000580095 NEK9Q8TD19 979 aa11.26□□□□□ -0.61
TOP3A-209ENST00000580095 CAMKK2Q96RR4 588 aa11.26□□□□□ -0.61
TOP3A-209ENST00000580095 EPB41L4BQ9H329 900 aa11.26□□□□□ -0.61
TOP3A-209ENST00000580095 TBC1D22BQ9NU19 505 aa11.26□□□□□ -0.61
TOP3A-209ENST00000580095 SEPT9Q9UHD8 586 aaPredicted RBP11.26□□□□□ -0.61
TOP3A-209ENST00000580095 ZNF646O15015 1829 aaPredicted RBP11.26□□□□□ -0.61
TOP3A-209ENST00000580095 VWA5AO00534 786 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 GJB6O95452 261 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 NR3C2P08235 984 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 RARAP10276 462 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 HARSP12081 509 aaKnown RBP11.25□□□□□ -0.61
TOP3A-209ENST00000580095 HMGCS2P54868 508 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 IFI35P80217 286 aaPredicted RBP11.25□□□□□ -0.61
TOP3A-209ENST00000580095 FSTL1Q12841 308 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 KRT39Q6A163 491 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 SNRNP48Q6IEG0 339 aaKnown RBP11.25□□□□□ -0.61
TOP3A-209ENST00000580095 DLK2Q6UY11 383 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 ZNF526Q8TF50 670 aaPredicted RBP11.25□□□□□ -0.61
TOP3A-209ENST00000580095 TMEM143Q96AN5 459 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 PWWP2AQ96N64 755 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 FAM114A2Q9NRY5 505 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 RAB20Q9NX57 234 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 CENPFP49454 3210 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 RGS20O76081 388 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 PTGIRP43119 386 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 SMTNP53814 917 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 MFAP3P55082 362 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 NCKAP1LP55160 1127 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 GSCP56915 257 aaPredicted RBP11.25□□□□□ -0.61
TOP3A-209ENST00000580095 MTERF2Q49AM1 385 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 TTC31Q49AM3 519 aaPredicted RBP11.25□□□□□ -0.61
TOP3A-209ENST00000580095 CCDC60Q8IWA6 550 aaPredicted RBP11.25□□□□□ -0.61
TOP3A-209ENST00000580095 C4orf19Q8IY42 314 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 SHC3Q92529 594 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 ZBTB45Q96K62 511 aaPredicted RBP11.25□□□□□ -0.61
TOP3A-209ENST00000580095 PSMD1Q99460 953 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 HERPUD2Q9BSE4 406 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 HEMGNQ9BXL5 484 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 CCDC113Q9H0I3 377 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 RAB17Q9H0T7 212 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 GRHL1Q9NZI5 618 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 SLC12A6Q9UHW9 1150 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 TTC7AQ9ULT0 858 aaPredicted RBP11.25□□□□□ -0.61
TOP3A-209ENST00000580095 PMS2P54278 862 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 ZBTB41Q5SVQ8 909 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 CIAPIN1Q6FI81 312 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 LRIG3Q6UXM1 1119 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 PRUNE1Q86TP1 453 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 FBXL13Q8NEE6 735 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 PPM1EQ8WY54 764 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 SEC14L1Q92503 715 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 SELENOSQ9BQE4 189 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 KIAA1683Q9H0B3 1180 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 DEFB129Q9H1M3 183 aa11.25□□□□□ -0.61
TOP3A-209ENST00000580095 RBBP6Q7Z6E9 1792 aaKnown RBP11.24□□□□□ -0.61
TOP3A-209ENST00000580095 COL2A1P02458 1487 aaPredicted RBP11.24□□□□□ -0.61
TOP3A-209ENST00000580095 ZBED4O75132 1171 aa11.24□□□□□ -0.61
TOP3A-209ENST00000580095 PHF2O75151 1096 aa11.24□□□□□ -0.61
TOP3A-209ENST00000580095 ERLIN2O94905 339 aa11.24□□□□□ -0.61
TOP3A-209ENST00000580095 PDE6CP51160 858 aa11.24□□□□□ -0.61
TOP3A-209ENST00000580095 SPRED3Q2MJR0 410 aa11.24□□□□□ -0.61
TOP3A-209ENST00000580095 EFCAB13Q8IY85 973 aa11.24□□□□□ -0.61
TOP3A-209ENST00000580095 EPS8L3Q8TE67 593 aaKnown RBP11.24□□□□□ -0.61
TOP3A-209ENST00000580095 ZNF516Q92618 1163 aa11.24□□□□□ -0.61
TOP3A-209ENST00000580095 NT5C1BQ96P26 610 aa11.24□□□□□ -0.61
TOP3A-209ENST00000580095 MOV10L1Q9BXT6 1211 aaKnown RBP11.24□□□□□ -0.61
TOP3A-209ENST00000580095 AZI2Q9H6S1 392 aa11.24□□□□□ -0.61
TOP3A-209ENST00000580095 ANAPC7Q9UJX3 599 aa11.24□□□□□ -0.61
TOP3A-209ENST00000580095 PCDHA10Q9Y5I2 948 aa11.24□□□□□ -0.61
TOP3A-209ENST00000580095 PPFIA2O75334 1257 aa11.24□□□□□ -0.61
TOP3A-209ENST00000580095 PPP2R2AP63151 447 aa11.24□□□□□ -0.61
TOP3A-209ENST00000580095 SEL1L2Q5TEA6 688 aa11.24□□□□□ -0.61
TOP3A-209ENST00000580095 RUFY4Q6ZNE9 571 aa11.24□□□□□ -0.61
TOP3A-209ENST00000580095 OTUD6AQ7L8S5 288 aa11.24□□□□□ -0.61
TOP3A-209ENST00000580095 TAS1R3Q7RTX0 852 aa11.24□□□□□ -0.61
TOP3A-209ENST00000580095 MAP4K3Q8IVH8 894 aa11.24□□□□□ -0.61
TOP3A-209ENST00000580095 OTUD6BQ8N6M0 293 aa11.24□□□□□ -0.61
TOP3A-209ENST00000580095 AGBL3Q8NEM8 1001 aa11.24□□□□□ -0.61
TOP3A-209ENST00000580095 RAPGEF5Q92565 580 aa11.24□□□□□ -0.61
TOP3A-209ENST00000580095 CYFIP2Q96F07 1278 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms