RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 PPP4R3CPQ6ZMV5 832 aa14.79□□□□□ -0.04
TRAF4-214ENST00000580073 FBXO18Q8NFZ0 1043 aa14.79□□□□□ -0.04
TRAF4-214ENST00000580073 ERMNQ8TAM6 284 aa14.79□□□□□ -0.04
TRAF4-214ENST00000580073 ZFP42Q96MM3 310 aa14.79□□□□□ -0.04
TRAF4-214ENST00000580073 SEMA4AQ9H3S1 761 aa14.79□□□□□ -0.04
TRAF4-214ENST00000580073 HES2Q9Y543 173 aa14.79□□□□□ -0.04
TRAF4-214ENST00000580073 N4BP3O15049 544 aa14.78□□□□□ -0.04
TRAF4-214ENST00000580073 USO1O60763 962 aaKnown RBP14.78□□□□□ -0.04
TRAF4-214ENST00000580073 TADA2AO75478 443 aa14.78□□□□□ -0.04
TRAF4-214ENST00000580073 NPTXRO95502 500 aa14.78□□□□□ -0.04
TRAF4-214ENST00000580073 EFEMP2O95967 443 aa14.78□□□□□ -0.04
TRAF4-214ENST00000580073 GLRA2P23416 452 aa14.78□□□□□ -0.04
TRAF4-214ENST00000580073 AFF1P51825 1210 aaKnown RBP14.78□□□□□ -0.04
TRAF4-214ENST00000580073 ORC2Q13416 577 aaPredicted RBP14.78□□□□□ -0.04
TRAF4-214ENST00000580073 TUSC3Q13454 348 aa14.78□□□□□ -0.04
TRAF4-214ENST00000580073 HSP90AA2PQ14568 343 aaPredicted RBP14.78□□□□□ -0.04
TRAF4-214ENST00000580073 PPP2R5AQ15172 486 aa14.78□□□□□ -0.04
TRAF4-214ENST00000580073 SAFBQ15424 915 aaKnown RBP eCLIP14.78□□□□□ -0.04
TRAF4-214ENST00000580073 ZC3H14Q6PJT7 736 aaKnown RBP14.78□□□□□ -0.04
TRAF4-214ENST00000580073 ASAP3Q8TDY4 903 aa14.78□□□□□ -0.04
TRAF4-214ENST00000580073 RIN2Q8WYP3 895 aaPredicted RBP14.78□□□□□ -0.04
TRAF4-214ENST00000580073 C8orf76Q96K31 380 aa14.78□□□□□ -0.04
TRAF4-214ENST00000580073 HSD17B14Q9BPX1 270 aa14.78□□□□□ -0.04
TRAF4-214ENST00000580073 TUFT1Q9NNX1 390 aa14.78□□□□□ -0.04
TRAF4-214ENST00000580073 CHST7Q9NS84 486 aa14.78□□□□□ -0.04
TRAF4-214ENST00000580073 PARP2Q9UGN5 583 aa14.78□□□□□ -0.04
TRAF4-214ENST00000580073 A0A1B0GUA9 196 aa14.77□□□□□ -0.05
TRAF4-214ENST00000580073 HNRNPA1P09651 372 aaKnown RBP eCLIP14.77□□□□□ -0.05
TRAF4-214ENST00000580073 TXKP42681 527 aa14.77□□□□□ -0.05
TRAF4-214ENST00000580073 ANGPT1Q15389 498 aa14.77□□□□□ -0.05
TRAF4-214ENST00000580073 MAPK6Q16659 721 aa14.77□□□□□ -0.05
TRAF4-214ENST00000580073 AMHR2Q16671 573 aa14.77□□□□□ -0.05
TRAF4-214ENST00000580073 FAM187BQ17R55 369 aa14.77□□□□□ -0.05
TRAF4-214ENST00000580073 HAUS3Q68CZ6 603 aa14.77□□□□□ -0.05
TRAF4-214ENST00000580073 GET4Q7L5D6 327 aaPredicted RBP14.77□□□□□ -0.05
TRAF4-214ENST00000580073 DIS3L2Q8IYB7 885 aaKnown RBP14.77□□□□□ -0.05
TRAF4-214ENST00000580073 DTWD2Q8NBA8 298 aa14.77□□□□□ -0.05
TRAF4-214ENST00000580073 PRKD2Q9BZL6 878 aa14.77□□□□□ -0.05
TRAF4-214ENST00000580073 SMC3Q9UQE7 1217 aa14.77□□□□□ -0.05
TRAF4-214ENST00000580073 DOCK6Q96HP0 2047 aa14.76□□□□□ -0.05
TRAF4-214ENST00000580073 TGM5O43548 720 aa14.76□□□□□ -0.05
TRAF4-214ENST00000580073 XYLBO75191 536 aa14.76□□□□□ -0.05
TRAF4-214ENST00000580073 CFHP08603 1231 aa14.76□□□□□ -0.05
TRAF4-214ENST00000580073 HOXA9P31269 272 aa14.76□□□□□ -0.05
TRAF4-214ENST00000580073 CDCA2Q69YH5 1023 aaPredicted RBP14.76□□□□□ -0.05
TRAF4-214ENST00000580073 MTSS1LQ765P7 747 aa14.76□□□□□ -0.05
TRAF4-214ENST00000580073 ASCL5Q7RTU5 278 aa14.76□□□□□ -0.05
TRAF4-214ENST00000580073 FRMD5Q7Z6J6 570 aa14.76□□□□□ -0.05
TRAF4-214ENST00000580073 FAM184AQ8NB25 1140 aa14.76□□□□□ -0.05
TRAF4-214ENST00000580073 SHDQ96IW2 340 aa14.76□□□□□ -0.05
TRAF4-214ENST00000580073 TTPALQ9BTX7 342 aa14.76□□□□□ -0.05
TRAF4-214ENST00000580073 NT5C3AQ9H0P0 336 aa14.76□□□□□ -0.05
TRAF4-214ENST00000580073 RNF39Q9H2S5 420 aa14.76□□□□□ -0.05
TRAF4-214ENST00000580073 FBXW11Q9UKB1 542 aa14.76□□□□□ -0.05
TRAF4-214ENST00000580073 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.76□□□□□ -0.05
TRAF4-214ENST00000580073 PHLPP2Q6ZVD8 1323 aa14.75□□□□□ -0.05
TRAF4-214ENST00000580073 ZBTB39O15060 712 aa14.75□□□□□ -0.05
TRAF4-214ENST00000580073 RFPL2O75678 378 aa14.75□□□□□ -0.05
TRAF4-214ENST00000580073 ZMYND10O75800 440 aa14.75□□□□□ -0.05
TRAF4-214ENST00000580073 THP07101 528 aa14.75□□□□□ -0.05
TRAF4-214ENST00000580073 NPR3P17342 541 aa14.75□□□□□ -0.05
TRAF4-214ENST00000580073 ATP2B1P20020 1258 aa14.75□□□□□ -0.05
TRAF4-214ENST00000580073 MUTP22033 750 aa14.75□□□□□ -0.05
TRAF4-214ENST00000580073 AKAP5P24588 427 aa14.75□□□□□ -0.05
TRAF4-214ENST00000580073 PRPF4BQ13523 1007 aaKnown RBP14.75□□□□□ -0.05
TRAF4-214ENST00000580073 PSMD5Q16401 504 aa14.75□□□□□ -0.05
TRAF4-214ENST00000580073 DCAF4L1Q3SXM0 396 aa14.75□□□□□ -0.05
TRAF4-214ENST00000580073 PHLDB3Q6NSJ2 640 aa14.75□□□□□ -0.05
TRAF4-214ENST00000580073 RTL10Q7L3V2 364 aa14.75□□□□□ -0.05
TRAF4-214ENST00000580073 PALB2Q86YC2 1186 aa14.75□□□□□ -0.05
TRAF4-214ENST00000580073 HSCBQ8IWL3 235 aa14.75□□□□□ -0.05
TRAF4-214ENST00000580073 SPRYD3Q8NCJ5 442 aa14.75□□□□□ -0.05
TRAF4-214ENST00000580073 INTS4Q96HW7 963 aaKnown RBP14.75□□□□□ -0.05
TRAF4-214ENST00000580073 NACC1Q96RE7 527 aa14.75□□□□□ -0.05
TRAF4-214ENST00000580073 TBC1D17Q9HA65 648 aa14.75□□□□□ -0.05
TRAF4-214ENST00000580073 ARHGEF3Q9NR81 526 aa14.75□□□□□ -0.05
TRAF4-214ENST00000580073 SLC2A4RGQ9NR83 387 aa14.75□□□□□ -0.05
TRAF4-214ENST00000580073 CFAP54Q96N23 3096 aa14.74□□□□□ -0.05
TRAF4-214ENST00000580073 ARHGEF35A5YM69 484 aa14.74□□□□□ -0.05
TRAF4-214ENST00000580073 POTEMA6NI47 508 aa14.74□□□□□ -0.05
TRAF4-214ENST00000580073 B4GALT5O43286 388 aa14.74□□□□□ -0.05
TRAF4-214ENST00000580073 N4BP1O75113 896 aaKnown RBP14.74□□□□□ -0.05
TRAF4-214ENST00000580073 POU2F2P09086 479 aa14.74□□□□□ -0.05
TRAF4-214ENST00000580073 LAMP2P13473 410 aa14.74□□□□□ -0.05
TRAF4-214ENST00000580073 FSHRP23945 695 aa14.74□□□□□ -0.05
TRAF4-214ENST00000580073 NAMPTP43490 491 aa14.74□□□□□ -0.05
TRAF4-214ENST00000580073 EFNA5P52803 228 aa14.74□□□□□ -0.05
TRAF4-214ENST00000580073 PPM1LQ5SGD2 360 aa14.74□□□□□ -0.05
TRAF4-214ENST00000580073 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.74□□□□□ -0.05
TRAF4-214ENST00000580073 TAS1R1Q7RTX1 841 aa14.74□□□□□ -0.05
TRAF4-214ENST00000580073 ERMP1Q7Z2K6 904 aa14.74□□□□□ -0.05
TRAF4-214ENST00000580073 GLYCTKQ8IVS8 523 aa14.74□□□□□ -0.05
TRAF4-214ENST00000580073 SLC44A3Q8N4M1 653 aa14.74□□□□□ -0.05
TRAF4-214ENST00000580073 GSTCDQ8NEC7 633 aa14.74□□□□□ -0.05
TRAF4-214ENST00000580073 DEPTORQ8TB45 409 aa14.74□□□□□ -0.05
TRAF4-214ENST00000580073 PIGOQ8TEQ8 1089 aa14.74□□□□□ -0.05
TRAF4-214ENST00000580073 PIK3R5Q8WYR1 880 aa14.74□□□□□ -0.05
TRAF4-214ENST00000580073 ZNF707Q96C28 371 aaPredicted RBP14.74□□□□□ -0.05
TRAF4-214ENST00000580073 IFT74Q96LB3 600 aa14.74□□□□□ -0.05
TRAF4-214ENST00000580073 MTMR9Q96QG7 549 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms