RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 KRT37O76014 449 aa13.59□□□□□ -0.23
CDK5RAP3-216ENST00000579853 POU2F2P09086 479 aa13.59□□□□□ -0.23
CDK5RAP3-216ENST00000579853 RPS9P46781 194 aaKnown RBP13.59□□□□□ -0.23
CDK5RAP3-216ENST00000579853 PTENP60484 403 aa13.59□□□□□ -0.23
CDK5RAP3-216ENST00000579853 GRIK3Q13003 919 aa13.59□□□□□ -0.23
CDK5RAP3-216ENST00000579853 PPP2R5CQ13362 524 aa13.59□□□□□ -0.23
CDK5RAP3-216ENST00000579853 TFDP1Q14186 410 aa13.59□□□□□ -0.23
CDK5RAP3-216ENST00000579853 EMC2Q15006 297 aa13.59□□□□□ -0.23
CDK5RAP3-216ENST00000579853 NTRK3Q16288 839 aa13.59□□□□□ -0.23
CDK5RAP3-216ENST00000579853 PARM1Q6UWI2 310 aa13.59□□□□□ -0.23
CDK5RAP3-216ENST00000579853 RTL10Q7L3V2 364 aa13.59□□□□□ -0.23
CDK5RAP3-216ENST00000579853 GRASPQ7Z6J2 395 aaPredicted RBP13.59□□□□□ -0.23
CDK5RAP3-216ENST00000579853 GLYCTKQ8IVS8 523 aa13.59□□□□□ -0.23
CDK5RAP3-216ENST00000579853 C4orf19Q8IY42 314 aa13.59□□□□□ -0.23
CDK5RAP3-216ENST00000579853 TRIM22Q8IYM9 498 aa13.59□□□□□ -0.23
CDK5RAP3-216ENST00000579853 FGF13Q92913 245 aa13.59□□□□□ -0.23
CDK5RAP3-216ENST00000579853 ZFP42Q96MM3 310 aa13.59□□□□□ -0.23
CDK5RAP3-216ENST00000579853 PHF20Q9BVI0 1012 aa13.59□□□□□ -0.23
CDK5RAP3-216ENST00000579853 EIF2AQ9BY44 585 aaKnown RBP13.59□□□□□ -0.23
CDK5RAP3-216ENST00000579853 SLKQ9H2G2 1235 aaPredicted RBP13.59□□□□□ -0.23
CDK5RAP3-216ENST00000579853 DDX25Q9UHL0 483 aaKnown RBP13.59□□□□□ -0.23
CDK5RAP3-216ENST00000579853 GMEB2Q9UKD1 530 aa13.59□□□□□ -0.23
CDK5RAP3-216ENST00000579853 KCNH3Q9ULD8 1083 aa13.59□□□□□ -0.23
CDK5RAP3-216ENST00000579853 PATJQ8NI35 1801 aa13.59□□□□□ -0.23
CDK5RAP3-216ENST00000579853 INO80B-WBP1J3KQ70 363 aa13.58□□□□□ -0.24
CDK5RAP3-216ENST00000579853 TSPAN1O60635 241 aa13.58□□□□□ -0.24
CDK5RAP3-216ENST00000579853 LILRB5O75023 590 aa13.58□□□□□ -0.24
CDK5RAP3-216ENST00000579853 NRLP54845 237 aa13.58□□□□□ -0.24
CDK5RAP3-216ENST00000579853 ELAVL2Q12926 359 aaKnown RBP13.58□□□□□ -0.24
CDK5RAP3-216ENST00000579853 PPP2R5DQ14738 602 aa13.58□□□□□ -0.24
CDK5RAP3-216ENST00000579853 UVSSAQ2YD98 709 aa13.58□□□□□ -0.24
CDK5RAP3-216ENST00000579853 PPM1LQ5SGD2 360 aa13.58□□□□□ -0.24
CDK5RAP3-216ENST00000579853 IFNLR1Q8IU57 520 aaPredicted RBP13.58□□□□□ -0.24
CDK5RAP3-216ENST00000579853 PIK3R5Q8WYR1 880 aa13.58□□□□□ -0.24
CDK5RAP3-216ENST00000579853 NELL1Q92832 810 aa13.58□□□□□ -0.24
CDK5RAP3-216ENST00000579853 CLDN23Q96B33 292 aa13.58□□□□□ -0.24
CDK5RAP3-216ENST00000579853 B3GALT6Q96L58 329 aa13.58□□□□□ -0.24
CDK5RAP3-216ENST00000579853 MTRQ99707 1265 aa13.58□□□□□ -0.24
CDK5RAP3-216ENST00000579853 TTPALQ9BTX7 342 aa13.58□□□□□ -0.24
CDK5RAP3-216ENST00000579853 RPP25Q9BUL9 199 aaKnown RBP13.58□□□□□ -0.24
CDK5RAP3-216ENST00000579853 MIOSQ9NXC5 875 aa13.58□□□□□ -0.24
CDK5RAP3-216ENST00000579853 USP18Q9UMW8 372 aa13.58□□□□□ -0.24
CDK5RAP3-216ENST00000579853 ZZEF1O43149 2961 aa13.58□□□□□ -0.24
CDK5RAP3-216ENST00000579853 ZFYVE26Q68DK2 2539 aa13.57□□□□□ -0.24
CDK5RAP3-216ENST00000579853 F8W810 466 aa13.57□□□□□ -0.24
CDK5RAP3-216ENST00000579853 EML1O00423 815 aa13.57□□□□□ -0.24
CDK5RAP3-216ENST00000579853 C8AP07357 584 aa13.57□□□□□ -0.24
CDK5RAP3-216ENST00000579853 GCFC2P16383 781 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP3-216ENST00000579853 RPL17P18621 184 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP3-216ENST00000579853 YWHABP31946 246 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP3-216ENST00000579853 HSP90AA2PQ14568 343 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP3-216ENST00000579853 XKR9Q5GH70 373 aa13.57□□□□□ -0.24
CDK5RAP3-216ENST00000579853 BMP2KLQ5H9B9 411 aa13.57□□□□□ -0.24
CDK5RAP3-216ENST00000579853 SLC27A1Q6PCB7 646 aa13.57□□□□□ -0.24
CDK5RAP3-216ENST00000579853 BLOC1S2Q6QNY1 142 aa13.57□□□□□ -0.24
CDK5RAP3-216ENST00000579853 ZNF852Q6ZMS4 543 aa13.57□□□□□ -0.24
CDK5RAP3-216ENST00000579853 BLIDQ8IZY5 108 aa13.57□□□□□ -0.24
CDK5RAP3-216ENST00000579853 DAGLBQ8NCG7 672 aa13.57□□□□□ -0.24
CDK5RAP3-216ENST00000579853 LXNQ9BS40 222 aa13.57□□□□□ -0.24
CDK5RAP3-216ENST00000579853 AGXT2Q9BYV1 514 aa13.57□□□□□ -0.24
CDK5RAP3-216ENST00000579853 ZSWIM4Q9H7M6 989 aa13.57□□□□□ -0.24
CDK5RAP3-216ENST00000579853 RAB23Q9ULC3 237 aa13.57□□□□□ -0.24
CDK5RAP3-216ENST00000579853 HES2Q9Y543 173 aa13.57□□□□□ -0.24
CDK5RAP3-216ENST00000579853 FRYQ5TBA9 3013 aa13.57□□□□□ -0.24
CDK5RAP3-216ENST00000579853 TBX3O15119 743 aa13.56□□□□□ -0.24
CDK5RAP3-216ENST00000579853 TUSC3Q13454 348 aa13.56□□□□□ -0.24
CDK5RAP3-216ENST00000579853 EPHA7Q15375 998 aa13.56□□□□□ -0.24
CDK5RAP3-216ENST00000579853 PSMD5Q16401 504 aa13.56□□□□□ -0.24
CDK5RAP3-216ENST00000579853 PRSS55Q6UWB4 352 aaPredicted RBP13.56□□□□□ -0.24
CDK5RAP3-216ENST00000579853 MAMSTRQ6ZN01 415 aa13.56□□□□□ -0.24
CDK5RAP3-216ENST00000579853 KRT25Q7Z3Z0 450 aa13.56□□□□□ -0.24
CDK5RAP3-216ENST00000579853 ZNF579Q8NAF0 562 aaKnown RBP13.56□□□□□ -0.24
CDK5RAP3-216ENST00000579853 GSTCDQ8NEC7 633 aa13.56□□□□□ -0.24
CDK5RAP3-216ENST00000579853 CPB2Q96IY4 423 aa13.56□□□□□ -0.24
CDK5RAP3-216ENST00000579853 NAP1L4Q99733 375 aaKnown RBP13.56□□□□□ -0.24
CDK5RAP3-216ENST00000579853 IER2Q9BTL4 223 aa13.56□□□□□ -0.24
CDK5RAP3-216ENST00000579853 APOL6Q9BWW8 343 aa13.56□□□□□ -0.24
CDK5RAP3-216ENST00000579853 NFKBIZQ9BYH8 718 aa13.56□□□□□ -0.24
CDK5RAP3-216ENST00000579853 NXF3Q9H4D5 531 aaKnown RBP13.56□□□□□ -0.24
CDK5RAP3-216ENST00000579853 KCNMB3Q9NPA1 279 aa13.56□□□□□ -0.24
CDK5RAP3-216ENST00000579853 GDE1Q9NZC3 331 aa13.56□□□□□ -0.24
CDK5RAP3-216ENST00000579853 DAXXQ9UER7 740 aaPredicted RBP13.56□□□□□ -0.24
CDK5RAP3-216ENST00000579853 VAV3Q9UKW4 847 aa13.56□□□□□ -0.24
CDK5RAP3-216ENST00000579853 POLIQ9UNA4 740 aa13.56□□□□□ -0.24
CDK5RAP3-216ENST00000579853 MTF2Q9Y483 593 aaPredicted RBP13.56□□□□□ -0.24
CDK5RAP3-216ENST00000579853 LAMA1P25391 3075 aa13.55□□□□□ -0.24
CDK5RAP3-216ENST00000579853 M0R2N6 131 aa13.55□□□□□ -0.24
CDK5RAP3-216ENST00000579853 MAN2B1O00754 1011 aa13.55□□□□□ -0.24
CDK5RAP3-216ENST00000579853 CCL16O15467 120 aa13.55□□□□□ -0.24
CDK5RAP3-216ENST00000579853 MARCH6O60337 910 aa13.55□□□□□ -0.24
CDK5RAP3-216ENST00000579853 LRP3O75074 770 aa13.55□□□□□ -0.24
CDK5RAP3-216ENST00000579853 ECI2O75521 394 aa13.55□□□□□ -0.24
CDK5RAP3-216ENST00000579853 DEXIO95424 95 aa13.55□□□□□ -0.24
CDK5RAP3-216ENST00000579853 ADRB1P08588 477 aa13.55□□□□□ -0.24
CDK5RAP3-216ENST00000579853 PRR29P0C7W0 189 aa13.55□□□□□ -0.24
CDK5RAP3-216ENST00000579853 ARF4P18085 180 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP3-216ENST00000579853 ADCY1Q08828 1119 aa13.55□□□□□ -0.24
CDK5RAP3-216ENST00000579853 SSRP1Q08945 709 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP3-216ENST00000579853 PABPC1LQ4VXU2 614 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP3-216ENST00000579853 RTP2Q5QGT7 225 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms