RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 FAM193BQ96PV7 902 aaPredicted RBP10.98□□□□□ -0.65
MKS1-208ENST00000579358 ACCSQ96QU6 501 aa10.98□□□□□ -0.65
MKS1-208ENST00000579358 TMEM175Q9BSA9 504 aa10.98□□□□□ -0.65
MKS1-208ENST00000579358 BLZF1Q9H2G9 400 aa10.98□□□□□ -0.65
MKS1-208ENST00000579358 TMEM206Q9H813 350 aa10.98□□□□□ -0.65
MKS1-208ENST00000579358 PLAGL2Q9UPG8 496 aa10.98□□□□□ -0.65
MKS1-208ENST00000579358 LZTS1Q9Y250 596 aa10.98□□□□□ -0.65
MKS1-208ENST00000579358 STYXL1Q9Y6J8 313 aa10.98□□□□□ -0.65
MKS1-208ENST00000579358 SZT2Q5T011 3432 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 A0A0B4J269 797 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 PTGESO14684 152 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 OGTO15294 1046 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 GRM6O15303 877 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 FGF18O76093 207 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 DDHD2O94830 711 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 GALTP07902 379 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 MYBP10242 640 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 CASP5P51878 434 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 FAM160A1Q05DH4 1040 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 POSTNQ15063 836 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 TIGD5Q53EQ6 642 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 XKR4Q5GH76 650 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 KANK3Q6NY19 840 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 SLC39A4Q6P5W5 647 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 ZBTB33Q86T24 672 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 ZNF280BQ86YH2 543 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 COLGALT2Q8IYK4 626 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 GRAMD1CQ8IYS0 662 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 FMR1NBQ8N0W7 255 aaPredicted RBP10.97□□□□□ -0.65
MKS1-208ENST00000579358 ENGASEQ8NFI3 743 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 MAFAQ8NHW3 353 aaPredicted RBP10.97□□□□□ -0.65
MKS1-208ENST00000579358 SPPL3Q8TCT6 385 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 ZBTB45Q96K62 511 aaPredicted RBP10.97□□□□□ -0.65
MKS1-208ENST00000579358 SNX27Q96L92 541 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 ACAP3Q96P50 834 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 FGFBP2Q9BYJ0 223 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 HAPLN2Q9GZV7 340 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 SPG21Q9NZD8 308 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 KLK14Q9P0G3 267 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 TBC1D7Q9P0N9 293 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 STK39Q9UEW8 545 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 GDAQ9Y2T3 454 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 UBE4BO95155 1302 aa10.97□□□□□ -0.65
MKS1-208ENST00000579358 RALGAPA2Q2PPJ7 1873 aa10.96□□□□□ -0.65
MKS1-208ENST00000579358 KLRC4O43908 158 aa10.96□□□□□ -0.65
MKS1-208ENST00000579358 FAM189A1O60320 539 aa10.96□□□□□ -0.65
MKS1-208ENST00000579358 B4GALT3O60512 393 aa10.96□□□□□ -0.65
MKS1-208ENST00000579358 NR1I2O75469 434 aa10.96□□□□□ -0.65
MKS1-208ENST00000579358 THP07101 528 aa10.96□□□□□ -0.65
MKS1-208ENST00000579358 CLTAP09496 248 aa10.96□□□□□ -0.65
MKS1-208ENST00000579358 HARSP12081 509 aaKnown RBP10.96□□□□□ -0.65
MKS1-208ENST00000579358 CASP1P29466 404 aa10.96□□□□□ -0.65
MKS1-208ENST00000579358 PBX3P40426 434 aa10.96□□□□□ -0.65
MKS1-208ENST00000579358 MATR3P43243 847 aaKnown RBP eCLIP10.96□□□□□ -0.65
MKS1-208ENST00000579358 SLC11A1P49279 550 aa10.96□□□□□ -0.65
MKS1-208ENST00000579358 POU5F1Q01860 360 aaKnown RBP10.96□□□□□ -0.65
MKS1-208ENST00000579358 KRT17Q04695 432 aa10.96□□□□□ -0.65
MKS1-208ENST00000579358 PSMD2Q13200 908 aa10.96□□□□□ -0.65
MKS1-208ENST00000579358 PDE12Q6L8Q7 609 aaKnown RBP10.96□□□□□ -0.65
MKS1-208ENST00000579358 ALKAL1Q6UXT8 129 aa10.96□□□□□ -0.65
MKS1-208ENST00000579358 CLEC17AQ6ZS10 378 aa10.96□□□□□ -0.65
MKS1-208ENST00000579358 EPM2AIP1Q7L775 607 aaPredicted RBP10.96□□□□□ -0.65
MKS1-208ENST00000579358 POF1BQ8WVV4 589 aa10.96□□□□□ -0.65
MKS1-208ENST00000579358 TMEM169Q96HH4 297 aa10.96□□□□□ -0.65
MKS1-208ENST00000579358 IGSF21Q96ID5 467 aa10.96□□□□□ -0.65
MKS1-208ENST00000579358 GBP3Q9H0R5 595 aa10.96□□□□□ -0.65
MKS1-208ENST00000579358 PLEKHA5Q9HAU0 1116 aa10.96□□□□□ -0.65
MKS1-208ENST00000579358 ALG13Q9NP73 1137 aaKnown RBP10.96□□□□□ -0.65
MKS1-208ENST00000579358 EXOC1Q9NV70 894 aa10.96□□□□□ -0.65
MKS1-208ENST00000579358 MIOSQ9NXC5 875 aa10.96□□□□□ -0.65
MKS1-208ENST00000579358 CNTN3Q9P232 1028 aa10.96□□□□□ -0.65
MKS1-208ENST00000579358 DNAJB4Q9UDY4 337 aa10.96□□□□□ -0.65
MKS1-208ENST00000579358 PUF60Q9UHX1 559 aaKnown RBP10.96□□□□□ -0.65
MKS1-208ENST00000579358 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.96□□□□□ -0.65
MKS1-208ENST00000579358 COL4A4P53420 1690 aaPredicted RBP10.95□□□□□ -0.66
MKS1-208ENST00000579358 ANKRD63C9JTQ0 380 aa10.95□□□□□ -0.66
MKS1-208ENST00000579358 NRP1O14786 923 aa10.95□□□□□ -0.66
MKS1-208ENST00000579358 KIAA0391O15091 583 aaKnown RBP10.95□□□□□ -0.66
MKS1-208ENST00000579358 ALDH2P05091 517 aa10.95□□□□□ -0.66
MKS1-208ENST00000579358 KCNE1P15382 129 aa10.95□□□□□ -0.66
MKS1-208ENST00000579358 GARTP22102 1010 aa10.95□□□□□ -0.66
MKS1-208ENST00000579358 OSTNP61366 133 aa10.95□□□□□ -0.66
MKS1-208ENST00000579358 KCNA1Q09470 495 aa10.95□□□□□ -0.66
MKS1-208ENST00000579358 DPYDQ12882 1025 aa10.95□□□□□ -0.66
MKS1-208ENST00000579358 TUSC3Q13454 348 aa10.95□□□□□ -0.66
MKS1-208ENST00000579358 SNW1Q13573 536 aaKnown RBP10.95□□□□□ -0.66
MKS1-208ENST00000579358 CAMK1Q14012 370 aa10.95□□□□□ -0.66
MKS1-208ENST00000579358 NAB2Q15742 525 aa10.95□□□□□ -0.66
MKS1-208ENST00000579358 BMT2Q1RMZ1 405 aa10.95□□□□□ -0.66
MKS1-208ENST00000579358 KMT5BQ4FZB7 885 aa10.95□□□□□ -0.66
MKS1-208ENST00000579358 TPRNQ4KMQ1 711 aa10.95□□□□□ -0.66
MKS1-208ENST00000579358 ELOA2Q8IYF1 753 aaPredicted RBP10.95□□□□□ -0.66
MKS1-208ENST00000579358 SYCP3Q8IZU3 236 aa10.95□□□□□ -0.66
MKS1-208ENST00000579358 ZNF507Q8TCN5 953 aa10.95□□□□□ -0.66
MKS1-208ENST00000579358 HPS3Q969F9 1004 aa10.95□□□□□ -0.66
MKS1-208ENST00000579358 CCDC47Q96A33 483 aaKnown RBP10.95□□□□□ -0.66
MKS1-208ENST00000579358 TIGD1Q96MW7 591 aa10.95□□□□□ -0.66
MKS1-208ENST00000579358 PPP1R10Q96QC0 940 aaKnown RBP10.95□□□□□ -0.66
MKS1-208ENST00000579358 TSPAN18Q96SJ8 248 aa10.95□□□□□ -0.66
MKS1-208ENST00000579358 MSTO1Q9BUK6 570 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms