RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 COL19A1Q14993 1142 aa26.23■■□□□ 1.79
LIMD2-207ENST00000579329 ADGRD2Q7Z7M1 963 aa26.23■■□□□ 1.79
LIMD2-207ENST00000579329 CCDC94Q9BW85 323 aaPredicted RBP26.23■■□□□ 1.79
LIMD2-207ENST00000579329 NGRNQ9NPE2 291 aaKnown RBP26.23■■□□□ 1.79
LIMD2-207ENST00000579329 PCDHGC5Q9Y5F6 944 aa26.23■■□□□ 1.79
LIMD2-207ENST00000579329 TDRD15B5MCY1 1934 aaKnown RBP26.23■■□□□ 1.79
LIMD2-207ENST00000579329 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.22■■□□□ 1.79
LIMD2-207ENST00000579329 ABLIM1O14639 778 aa26.22■■□□□ 1.79
LIMD2-207ENST00000579329 NRP1O14786 923 aa26.22■■□□□ 1.79
LIMD2-207ENST00000579329 NR1I2O75469 434 aa26.22■■□□□ 1.79
LIMD2-207ENST00000579329 GAP43P17677 238 aa26.22■■□□□ 1.79
LIMD2-207ENST00000579329 OR1G1P47890 313 aa26.22■■□□□ 1.79
LIMD2-207ENST00000579329 E2F4Q16254 413 aa26.22■■□□□ 1.79
LIMD2-207ENST00000579329 PLPP4Q5VZY2 271 aa26.22■■□□□ 1.79
LIMD2-207ENST00000579329 TMC7Q7Z402 723 aa26.22■■□□□ 1.79
LIMD2-207ENST00000579329 ZBTB33Q86T24 672 aa26.22■■□□□ 1.79
LIMD2-207ENST00000579329 DDX53Q86TM3 631 aaKnown RBP26.22■■□□□ 1.79
LIMD2-207ENST00000579329 IQUBQ8NA54 791 aa26.22■■□□□ 1.79
LIMD2-207ENST00000579329 BCL7CQ8WUZ0 217 aaPredicted RBP26.22■■□□□ 1.79
LIMD2-207ENST00000579329 DHX58Q96C10 678 aa26.22■■□□□ 1.79
LIMD2-207ENST00000579329 DNAJC19Q96DA6 116 aa26.22■■□□□ 1.79
LIMD2-207ENST00000579329 BICD1Q96G01 975 aa26.22■■□□□ 1.79
LIMD2-207ENST00000579329 SPATA32Q96LK8 384 aa26.22■■□□□ 1.79
LIMD2-207ENST00000579329 FIZ1Q96SL8 496 aa26.22■■□□□ 1.79
LIMD2-207ENST00000579329 SEL1LQ9UBV2 794 aa26.22■■□□□ 1.79
LIMD2-207ENST00000579329 TBX20Q9UMR3 447 aa26.22■■□□□ 1.79
LIMD2-207ENST00000579329 BMS1Q14692 1282 aaKnown RBP26.21■■□□□ 1.79
LIMD2-207ENST00000579329 RESP18Q5W5W9 173 aa26.21■■□□□ 1.79
LIMD2-207ENST00000579329 SFR1Q86XK3 245 aa26.21■■□□□ 1.79
LIMD2-207ENST00000579329 CEP120Q8N960 986 aa26.21■■□□□ 1.79
LIMD2-207ENST00000579329 LEO1Q8WVC0 666 aaPredicted RBP26.21■■□□□ 1.79
LIMD2-207ENST00000579329 LRRC27Q9C0I9 530 aa26.21■■□□□ 1.79
LIMD2-207ENST00000579329 TNMDQ9H2S6 317 aa26.21■■□□□ 1.79
LIMD2-207ENST00000579329 IGFLR1Q9H665 355 aa26.21■■□□□ 1.79
LIMD2-207ENST00000579329 CLDND1Q9NY35 253 aa26.21■■□□□ 1.79
LIMD2-207ENST00000579329 ANKFY1Q9P2R3 1169 aa26.21■■□□□ 1.79
LIMD2-207ENST00000579329 STK39Q9UEW8 545 aa26.21■■□□□ 1.79
LIMD2-207ENST00000579329 PRG3Q9Y2Y8 225 aaPredicted RBP26.21■■□□□ 1.79
LIMD2-207ENST00000579329 HARSP12081 509 aaKnown RBP26.2■■□□□ 1.78
LIMD2-207ENST00000579329 NMT1P30419 496 aaKnown RBP26.2■■□□□ 1.78
LIMD2-207ENST00000579329 NRIP1P48552 1158 aa26.2■■□□□ 1.78
LIMD2-207ENST00000579329 YARSP54577 528 aaKnown RBP26.2■■□□□ 1.78
LIMD2-207ENST00000579329 SMC1AQ14683 1233 aaKnown RBP26.2■■□□□ 1.78
LIMD2-207ENST00000579329 NOLC1Q14978 699 aaKnown RBP eCLIP26.2■■□□□ 1.78
LIMD2-207ENST00000579329 EP400NLQ6ZTU2 488 aa26.2■■□□□ 1.78
LIMD2-207ENST00000579329 ZBTB45Q96K62 511 aaPredicted RBP26.2■■□□□ 1.78
LIMD2-207ENST00000579329 ST6GALNAC4Q9H4F1 302 aa26.2■■□□□ 1.78
LIMD2-207ENST00000579329 EPHX3Q9H6B9 360 aa26.2■■□□□ 1.78
LIMD2-207ENST00000579329 TLE6Q9H808 572 aa26.2■■□□□ 1.78
LIMD2-207ENST00000579329 TOPORSQ9NS56 1045 aaPredicted RBP26.2■■□□□ 1.78
LIMD2-207ENST00000579329 MYO7AQ13402 2215 aa26.2■■□□□ 1.78
LIMD2-207ENST00000579329 FSD2A1L4K1 749 aa26.19■■□□□ 1.78
LIMD2-207ENST00000579329 PTGESO14684 152 aa26.19■■□□□ 1.78
LIMD2-207ENST00000579329 CLDN3O15551 220 aa26.19■■□□□ 1.78
LIMD2-207ENST00000579329 PIGRP01833 764 aa26.19■■□□□ 1.78
LIMD2-207ENST00000579329 THP07101 528 aa26.19■■□□□ 1.78
LIMD2-207ENST00000579329 IDEP14735 1019 aa26.19■■□□□ 1.78
LIMD2-207ENST00000579329 KCNA5P22460 613 aa26.19■■□□□ 1.78
LIMD2-207ENST00000579329 GTF2F1P35269 517 aaKnown RBP eCLIP26.19■■□□□ 1.78
LIMD2-207ENST00000579329 LIG4P49917 911 aa26.19■■□□□ 1.78
LIMD2-207ENST00000579329 GTF2BQ00403 316 aa26.19■■□□□ 1.78
LIMD2-207ENST00000579329 RBM23Q86U06 439 aaKnown RBP26.19■■□□□ 1.78
LIMD2-207ENST00000579329 VPS52Q8N1B4 723 aa26.19■■□□□ 1.78
LIMD2-207ENST00000579329 CHAMP1Q96JM3 812 aa26.19■■□□□ 1.78
LIMD2-207ENST00000579329 CDCA3Q99618 268 aaPredicted RBP26.19■■□□□ 1.78
LIMD2-207ENST00000579329 PYM1Q9BRP8 204 aaKnown RBP26.19■■□□□ 1.78
LIMD2-207ENST00000579329 COLEC11Q9BWP8 271 aa26.19■■□□□ 1.78
LIMD2-207ENST00000579329 ZBP1Q9H171 429 aa26.19■■□□□ 1.78
LIMD2-207ENST00000579329 MAGEF1Q9HAY2 307 aa26.19■■□□□ 1.78
LIMD2-207ENST00000579329 KBTBD4Q9NVX7 518 aa26.19■■□□□ 1.78
LIMD2-207ENST00000579329 MARCH5Q9NX47 278 aa26.19■■□□□ 1.78
LIMD2-207ENST00000579329 HNRNPDLO14979 420 aaKnown RBP26.18■■□□□ 1.78
LIMD2-207ENST00000579329 MATR3P43243 847 aaKnown RBP eCLIP26.18■■□□□ 1.78
LIMD2-207ENST00000579329 OSTNP61366 133 aa26.18■■□□□ 1.78
LIMD2-207ENST00000579329 NUCB2P80303 420 aa26.18■■□□□ 1.78
LIMD2-207ENST00000579329 AMPD3Q01432 767 aa26.18■■□□□ 1.78
LIMD2-207ENST00000579329 MCL1Q07820 350 aa26.18■■□□□ 1.78
LIMD2-207ENST00000579329 TUSC3Q13454 348 aa26.18■■□□□ 1.78
LIMD2-207ENST00000579329 CTC1Q2NKJ3 1217 aa26.18■■□□□ 1.78
LIMD2-207ENST00000579329 MAP4K3Q8IVH8 894 aa26.18■■□□□ 1.78
LIMD2-207ENST00000579329 EFHBQ8N7U6 833 aa26.18■■□□□ 1.78
LIMD2-207ENST00000579329 HVCN1Q96D96 273 aa26.18■■□□□ 1.78
LIMD2-207ENST00000579329 ACAP3Q96P50 834 aa26.18■■□□□ 1.78
LIMD2-207ENST00000579329 FRMD3A2A2Y4 597 aa26.17■■□□□ 1.78
LIMD2-207ENST00000579329 POLR2DO15514 142 aaKnown RBP26.17■■□□□ 1.78
LIMD2-207ENST00000579329 CTSAP10619 480 aa26.17■■□□□ 1.78
LIMD2-207ENST00000579329 DUSP6Q16828 381 aa26.17■■□□□ 1.78
LIMD2-207ENST00000579329 LEXMQ3ZCV2 418 aa26.17■■□□□ 1.78
LIMD2-207ENST00000579329 ZNF720Q7Z2F6 126 aa26.17■■□□□ 1.78
LIMD2-207ENST00000579329 STAMQ92783 540 aa26.17■■□□□ 1.78
LIMD2-207ENST00000579329 SCAND2PQ9GZW5 306 aaPredicted RBP26.17■■□□□ 1.78
LIMD2-207ENST00000579329 CXCL16Q9H2A7 254 aa26.17■■□□□ 1.78
LIMD2-207ENST00000579329 MRPL44Q9H9J2 332 aaKnown RBP26.17■■□□□ 1.78
LIMD2-207ENST00000579329 PANK4Q9NVE7 773 aa26.17■■□□□ 1.78
LIMD2-207ENST00000579329 HIDE1A8MVS5 230 aa26.16■■□□□ 1.78
LIMD2-207ENST00000579329 CA8P35219 290 aa26.16■■□□□ 1.78
LIMD2-207ENST00000579329 ADAM15Q13444 863 aa26.16■■□□□ 1.78
LIMD2-207ENST00000579329 ZC2HC1CQ53FD0 456 aaPredicted RBP26.16■■□□□ 1.78
LIMD2-207ENST00000579329 HERC4Q5GLZ8 1057 aaPredicted RBP26.16■■□□□ 1.78
LIMD2-207ENST00000579329 CCDC65Q8IXS2 484 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms