RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 PIDD1Q9HB75 910 aa10.16□□□□□ -0.78
CDK5RAP3-211ENST00000578996 DPP7Q9UHL4 492 aa10.16□□□□□ -0.78
CDK5RAP3-211ENST00000578996 USTQ9Y2C2 406 aa10.16□□□□□ -0.78
CDK5RAP3-211ENST00000578996 PCDHB6Q9Y5E3 794 aa10.16□□□□□ -0.78
CDK5RAP3-211ENST00000578996 SF3B1O75533 1304 aaKnown RBP eCLIP10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 WDFY4Q6ZS81 3184 aa10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 PP2D1A8MPX8 630 aa10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 E9PMD0 336 aa10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 ACKR2O00590 384 aa10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 ST18O60284 1047 aa10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 RFPL2O75678 378 aa10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 KIF4AO95239 1232 aa10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 EDN1P05305 212 aa10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 THP07101 528 aa10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 MUTP22033 750 aa10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 CDC25AP30304 524 aa10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 AVPR2P30518 371 aa10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 GBP2P32456 591 aaPredicted RBP10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 PTPN5P54829 565 aa10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 TUSC3Q13454 348 aa10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 FAM187BQ17R55 369 aa10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 GLRA4Q5JXX5 417 aa10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 ATF7IP2Q5U623 682 aa10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 KRT79Q5XKE5 535 aa10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 PRSS55Q6UWB4 352 aaPredicted RBP10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 C15orf39Q6ZRI6 1047 aa10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 RNF168Q8IYW5 571 aaPredicted RBP10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 C4orf32Q8N8J7 132 aa10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 SMG7Q92540 1137 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 KIFAP3Q92845 792 aa10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 PRRX2Q99811 253 aa10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 CCDC113Q9H0I3 377 aa10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 RXFP1Q9HBX9 757 aa10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 CHST7Q9NS84 486 aa10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 KIF3AQ9Y496 699 aa10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 STK24Q9Y6E0 443 aa10.15□□□□□ -0.78
CDK5RAP3-211ENST00000578996 TRIOO75962 3097 aa10.15□□□□□ -0.79
CDK5RAP3-211ENST00000578996 TECTAO75443 2155 aa10.14□□□□□ -0.79
CDK5RAP3-211ENST00000578996 TDRD15B5MCY1 1934 aaKnown RBP10.14□□□□□ -0.79
CDK5RAP3-211ENST00000578996 H3BQV1 296 aa10.14□□□□□ -0.79
CDK5RAP3-211ENST00000578996 K7ERI5 159 aa10.14□□□□□ -0.79
CDK5RAP3-211ENST00000578996 PTGESO14684 152 aa10.14□□□□□ -0.79
CDK5RAP3-211ENST00000578996 TGM5O43548 720 aa10.14□□□□□ -0.79
CDK5RAP3-211ENST00000578996 U2AF2P26368 475 aaKnown RBP eCLIP10.14□□□□□ -0.79
CDK5RAP3-211ENST00000578996 TOB1P50616 345 aaPredicted RBP10.14□□□□□ -0.79
CDK5RAP3-211ENST00000578996 EFNA5P52803 228 aa10.14□□□□□ -0.79
CDK5RAP3-211ENST00000578996 PEX3P56589 373 aa10.14□□□□□ -0.79
CDK5RAP3-211ENST00000578996 CREMQ03060 361 aa10.14□□□□□ -0.79
CDK5RAP3-211ENST00000578996 RABEP1Q15276 862 aa10.14□□□□□ -0.79
CDK5RAP3-211ENST00000578996 DCAF4L1Q3SXM0 396 aa10.14□□□□□ -0.79
CDK5RAP3-211ENST00000578996 RTP2Q5QGT7 225 aa10.14□□□□□ -0.79
CDK5RAP3-211ENST00000578996 FAM171A1Q5VUB5 890 aa10.14□□□□□ -0.79
CDK5RAP3-211ENST00000578996 EEF1DP3Q658K8 133 aa10.14□□□□□ -0.79
CDK5RAP3-211ENST00000578996 DTHD1Q6ZMT9 781 aa10.14□□□□□ -0.79
CDK5RAP3-211ENST00000578996 GET4Q7L5D6 327 aaPredicted RBP10.14□□□□□ -0.79
CDK5RAP3-211ENST00000578996 STAMQ92783 540 aa10.14□□□□□ -0.79
CDK5RAP3-211ENST00000578996 PHOX2BQ99453 314 aa10.14□□□□□ -0.79
CDK5RAP3-211ENST00000578996 CXCL16Q9H2A7 254 aa10.14□□□□□ -0.79
CDK5RAP3-211ENST00000578996 FAM86C1Q9NVL1 165 aa10.14□□□□□ -0.79
CDK5RAP3-211ENST00000578996 FBXL21Q9UKT6 434 aa10.14□□□□□ -0.79
CDK5RAP3-211ENST00000578996 DNM3Q9UQ16 869 aa10.14□□□□□ -0.79
CDK5RAP3-211ENST00000578996 ZMYM2Q9UBW7 1377 aa10.14□□□□□ -0.79
CDK5RAP3-211ENST00000578996 CLUHO75153 1309 aa10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 LAD1O00515 517 aa10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 HIP1RO75146 1068 aa10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 EFEMP2O95967 443 aa10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 HARSP12081 509 aaKnown RBP10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 GJB2P29033 226 aa10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 YARSP54577 528 aaKnown RBP10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 OSTNP61366 133 aa10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 RAD51AP2Q09MP3 1159 aa10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 TCF15Q12870 199 aa10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 DMP1Q13316 513 aaPredicted RBP10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 PDIA5Q14554 519 aa10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 PSMD5Q16401 504 aa10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 ZNF568Q3ZCX4 644 aa10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 NT5DC1Q5TFE4 455 aa10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 APBB1IPQ7Z5R6 666 aaPredicted RBP10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 IGSF22Q8N9C0 903 aa10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 FLCNQ8NFG4 579 aa10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 CMASQ8NFW8 434 aaPredicted RBP10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 PLIN2Q99541 437 aa10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 TTPALQ9BTX7 342 aa10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 PLEKHA4Q9H4M7 779 aa10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 UPF2Q9HAU5 1272 aaKnown RBP10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 KCNK12Q9HB15 430 aa10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 WDR6Q9NNW5 1121 aaKnown RBP10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 KMT5AQ9NQR1 393 aa10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 FNIP2Q9P278 1114 aa10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 POLIQ9UNA4 740 aa10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 PLXNA3P51805 1871 aa10.13□□□□□ -0.79
CDK5RAP3-211ENST00000578996 PHLPP2Q6ZVD8 1323 aa10.12□□□□□ -0.79
CDK5RAP3-211ENST00000578996 H0Y858 1186 aa10.12□□□□□ -0.79
CDK5RAP3-211ENST00000578996 N4BP1O75113 896 aaKnown RBP10.12□□□□□ -0.79
CDK5RAP3-211ENST00000578996 B3GAT3O94766 335 aa10.12□□□□□ -0.79
CDK5RAP3-211ENST00000578996 NPTX2P47972 431 aa10.12□□□□□ -0.79
CDK5RAP3-211ENST00000578996 CLCNKBP51801 687 aa10.12□□□□□ -0.79
CDK5RAP3-211ENST00000578996 TDGQ13569 410 aa10.12□□□□□ -0.79
CDK5RAP3-211ENST00000578996 IL17AQ16552 155 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms