RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 C9IYK1 514 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 CLIC2O15247 247 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 TGFB1I1O43294 461 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 GNA14O95837 355 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 CLTAP09496 248 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 CD44P16070 742 aaKnown RBP12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 IBSPP21815 317 aaPredicted RBP12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 HOXD13P35453 343 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 GRM5P41594 1212 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 WDR5P61964 334 aaKnown RBP12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 SURF1Q15526 300 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 ANO6Q4KMQ2 910 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 TMEM240Q5SV17 173 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 UBXN11Q5T124 520 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 ZNF697Q5TEC3 545 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 EEF1DP3Q658K8 133 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 LRSAM1Q6UWE0 723 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 ECHDC2Q86YB7 292 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 FAM114A1Q8IWE2 563 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 CD302Q8IX05 232 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 THNSL1Q8IYQ7 743 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 RNF169Q8NCN4 708 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 HERVK_113Q902F9 699 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 ZBTB45Q96K62 511 aaPredicted RBP12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 CEP63Q96MT8 703 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 RPS6KC1Q96S38 1066 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 SLC9A7Q96T83 725 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.28□□□□□ -0.449e-16■□□□□ 8.9
CDK5RAP3-210ENST00000578733 CBWD1Q9BRT8 395 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 EIF2AQ9BY44 585 aaKnown RBP12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 OSBPL7Q9BZF2 842 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 DNAJC25Q9H1X3 360 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 SEMA6BQ9H3T3 888 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 PCIF1Q9H4Z3 704 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 RPF1Q9H9Y2 349 aaKnown RBP12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 PRDM6Q9NQX0 595 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 USP20Q9Y2K6 914 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 GIT1Q9Y2X7 761 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 IPPQ9Y573 584 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 SLC4A7Q9Y6M7 1214 aa12.28□□□□□ -0.44
CDK5RAP3-210ENST00000578733 EYSQ5T1H1 3165 aa12.27□□□□□ -0.44
CDK5RAP3-210ENST00000578733 BECN2A8MW95 431 aa12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 SLC16A3O15427 465 aaKnown RBP12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 MGEA5O60502 916 aa12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 EPB41P11171 864 aaKnown RBP12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 PSMC2P35998 433 aaKnown RBP12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 STX17P56962 302 aa12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 ZNF445P59923 1031 aa12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 FAM189BP81408 668 aa12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 PPP2R3AQ06190 1150 aa12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 CEP135Q66GS9 1140 aa12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 ANKRD40Q6AI12 368 aa12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 SLC39A4Q6P5W5 647 aa12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 GLB1LQ6UWU2 654 aa12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 MRPL10Q7Z7H8 261 aaKnown RBP12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 CSGALNACT2Q8N6G5 542 aa12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 PHOSPHO2Q8TCD6 241 aa12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 URGCPQ8TCY9 931 aa12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 RNPC3Q96LT9 517 aaKnown RBP12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 TSPAN18Q96SJ8 248 aa12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 BPIFA3Q9BQP9 254 aa12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 FAM213AQ9BRX8 229 aa12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 MKNK1Q9BUB5 465 aa12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 APOL6Q9BWW8 343 aa12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 MRPL9Q9BYD2 267 aaKnown RBP12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 TSPY26PQ9H489 355 aa12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 RSAD1Q9HA92 442 aa12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 PLEKHA5Q9HAU0 1116 aa12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 SNTG2Q9NY99 539 aa12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 MAGEC2Q9UBF1 373 aaPredicted RBP12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 PARP2Q9UGN5 583 aa12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 KIAA1671Q9BY89 1806 aa12.27□□□□□ -0.45
CDK5RAP3-210ENST00000578733 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.26□□□□□ -0.45
CDK5RAP3-210ENST00000578733 TRIM49BA6NDI0 452 aa12.26□□□□□ -0.45
CDK5RAP3-210ENST00000578733 TISP43B9A030 160 aa12.26□□□□□ -0.45
CDK5RAP3-210ENST00000578733 ABLIM1O14639 778 aa12.26□□□□□ -0.45
CDK5RAP3-210ENST00000578733 MAPK13O15264 365 aa12.26□□□□□ -0.45
CDK5RAP3-210ENST00000578733 XPOTO43592 962 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-210ENST00000578733 IL18RAPO95256 599 aa12.26□□□□□ -0.45
CDK5RAP3-210ENST00000578733 KRT13P13646 458 aa12.26□□□□□ -0.45
CDK5RAP3-210ENST00000578733 ADSSP30520 456 aa12.26□□□□□ -0.45
CDK5RAP3-210ENST00000578733 OSTNP61366 133 aa12.26□□□□□ -0.45
CDK5RAP3-210ENST00000578733 MYL5Q02045 173 aa12.26□□□□□ -0.45
CDK5RAP3-210ENST00000578733 SNRNP35Q16560 246 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-210ENST00000578733 ZCWPW2Q504Y3 356 aa12.26□□□□□ -0.45
CDK5RAP3-210ENST00000578733 SPATA1Q5VX52 437 aa12.26□□□□□ -0.45
CDK5RAP3-210ENST00000578733 INTS8Q75QN2 995 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-210ENST00000578733 C16orf59Q7L2K0 433 aa12.26□□□□□ -0.45
CDK5RAP3-210ENST00000578733 RTN4RL1Q86UN2 441 aaPredicted RBP12.26□□□□□ -0.45
CDK5RAP3-210ENST00000578733 NT5DC4Q86YG4 428 aa12.26□□□□□ -0.45
CDK5RAP3-210ENST00000578733 SMG8Q8ND04 991 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-210ENST00000578733 ANKRD20A12PQ8NF67 263 aa12.26□□□□□ -0.45
CDK5RAP3-210ENST00000578733 ENOX1Q8TC92 643 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-210ENST00000578733 LINC01599Q8WXQ3 324 aa12.26□□□□□ -0.45
CDK5RAP3-210ENST00000578733 SAAL1Q96ER3 474 aa12.26□□□□□ -0.45
CDK5RAP3-210ENST00000578733 ZBED2Q9BTP6 218 aa12.26□□□□□ -0.45
CDK5RAP3-210ENST00000578733 NXF3Q9H4D5 531 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-210ENST00000578733 METTL14Q9HCE5 456 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-210ENST00000578733 RBAKQ9NYW8 714 aaPredicted RBP12.26□□□□□ -0.45
CDK5RAP3-210ENST00000578733 KANSL3Q9P2N6 904 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms