RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 PP2D1A8MPX8 630 aa9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 FGF18O76093 207 aa9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 LINC00271P0C7V0 271 aa9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 RPL9P32969 192 aaKnown RBP9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 GRM5P41594 1212 aa9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 CEBPZQ03701 1054 aaKnown RBP9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 GRIK3Q13003 919 aa9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 MAPK7Q13164 816 aa9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 UBXN11Q5T124 520 aa9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 MPZL3Q6UWV2 235 aa9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 CYP26C1Q6V0L0 522 aa9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 AGMOQ6ZNB7 445 aa9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 ZNF720Q7Z2F6 126 aa9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 DDX53Q86TM3 631 aaKnown RBP9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 NT5DC4Q86YG4 428 aa9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 DAW1Q8N136 415 aa9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 MICALL1Q8N3F8 863 aa9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 KLHL23Q8NBE8 558 aa9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 TMEM87AQ8NBN3 555 aa9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 RNF169Q8NCN4 708 aa9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 ACAP3Q96P50 834 aa9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 KIAA1586Q9HCI6 787 aa9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 PTPRHQ9HD43 1115 aa9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 GPRC5CQ9NQ84 441 aa9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 TLR9Q9NR96 1032 aa9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 PLSCR2Q9NRY7 297 aa9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 BLOC1S4Q9NUP1 217 aa9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 HOOK1Q9UJC3 728 aaKnown RBP9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 CSDE1O75534 798 aaKnown RBP9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 ZMYND10O75800 440 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 GALTP07902 379 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 CLTAP09496 248 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 SLFN14P0C7P3 912 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 FGFR1P11362 822 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 HOXB8P17481 243 aaPredicted RBP9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 ATF7P17544 494 aaPredicted RBP9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 CYP3A5P20815 502 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 FGFR4P22455 802 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 PROZP22891 400 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 ANP32AP39687 249 aaKnown RBP9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 BCAR1P56945 870 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 MCL1Q07820 350 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 TUSC3Q13454 348 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 ADGRE1Q14246 886 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 MCM6Q14566 821 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 SMC1AQ14683 1233 aaKnown RBP9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 COL19A1Q14993 1142 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 XKR4Q5GH76 650 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 HERC4Q5GLZ8 1057 aaPredicted RBP9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 CLLU1OSQ5K130 101 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 AXDND1Q5T1B0 1012 aaPredicted RBP9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 RESP18Q5W5W9 173 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 TMEM184AQ6ZMB5 413 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 TMC7Q7Z402 723 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 KCNK18Q7Z418 384 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 ELOA2Q8IYF1 753 aaPredicted RBP9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 SLC39A11Q8N1S5 342 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 SMG8Q8ND04 991 aaKnown RBP9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 ANKK1Q8NFD2 765 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 HELQQ8TDG4 1101 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 MICAL1Q8TDZ2 1067 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 HDAC7Q8WUI4 952 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 POF1BQ8WVV4 589 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 WNT2BQ93097 391 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 PABPC5Q96DU9 382 aaKnown RBP9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 IGSF21Q96ID5 467 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 ZNF668Q96K58 619 aaPredicted RBP9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 ACCSQ96QU6 501 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 C7orf25Q9BPX7 421 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 REEP2Q9BRK0 252 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 RUSC1Q9BVN2 902 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 EMILIN2Q9BXX0 1053 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 PDZD7Q9H5P4 517 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 TBC1D13Q9NVG8 400 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 THEGQ9P2T0 379 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 PARP2Q9UGN5 583 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 KCNH3Q9ULD8 1083 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 TBX20Q9UMR3 447 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 PCDHA7Q9UN72 937 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 DERAQ9Y315 318 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 STYXL1Q9Y6J8 313 aa9.39□□□□□ -0.91
PPP4R1-210ENST00000578557 TRIOBPQ9H2D6 2365 aa9.38□□□□□ -0.91
PPP4R1-210ENST00000578557 A0A087WWV3 80 aa9.38□□□□□ -0.91
PPP4R1-210ENST00000578557 FAM237AA0A1B0GTK4 181 aa9.38□□□□□ -0.91
PPP4R1-210ENST00000578557 FRMD3A2A2Y4 597 aa9.38□□□□□ -0.91
PPP4R1-210ENST00000578557 TMEM189-UBE2V1I3L0A0 370 aa9.38□□□□□ -0.91
PPP4R1-210ENST00000578557 EIF3DO15371 548 aaKnown RBP eCLIP9.38□□□□□ -0.91
PPP4R1-210ENST00000578557 SLC16A4O15374 487 aa9.38□□□□□ -0.91
PPP4R1-210ENST00000578557 NPTXRO95502 500 aa9.38□□□□□ -0.91
PPP4R1-210ENST00000578557 ITGB1P05556 798 aa9.38□□□□□ -0.91
PPP4R1-210ENST00000578557 KCNE1P15382 129 aa9.38□□□□□ -0.91
PPP4R1-210ENST00000578557 GARTP22102 1010 aa9.38□□□□□ -0.91
PPP4R1-210ENST00000578557 LIG4P49917 911 aa9.38□□□□□ -0.91
PPP4R1-210ENST00000578557 DNM1Q05193 864 aaKnown RBP9.38□□□□□ -0.91
PPP4R1-210ENST00000578557 DSC1Q08554 894 aa9.38□□□□□ -0.91
PPP4R1-210ENST00000578557 SURF1Q15526 300 aa9.38□□□□□ -0.91
PPP4R1-210ENST00000578557 PAN2Q504Q3 1202 aaKnown RBP9.38□□□□□ -0.91
PPP4R1-210ENST00000578557 TJAP1Q5JTD0 557 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms