RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 CAPS2Q9BXY5 557 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 NEUROG2Q9H2A3 272 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 HOXC10Q9NYD6 342 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 UVRAGQ9P2Y5 699 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 AMACRQ9UHK6 382 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 RASAL2Q9UJF2 1139 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 GTF3C4Q9UKN8 822 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 UTP11Q9Y3A2 253 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 AFG3L2Q9Y4W6 797 aa10.05□□□□□ -0.8
CDK5RAP3-208ENST00000578525 KIAA1217Q5T5P2 1943 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 HMGB1P1B2RPK0 211 aaPredicted RBP10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 DAPK3O43293 454 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 ATG7O95352 703 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 PIGRP01833 764 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 OATP04181 439 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 COMTP21964 271 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 HSD17B3P37058 310 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 IRAK1P51617 712 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 POLGP54098 1239 aaPredicted RBP10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 GNGT1P63211 74 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 DR1Q01658 176 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 SP4Q02446 784 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 GCNT1Q02742 428 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 STRN3Q13033 797 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 ZNF211Q13398 564 aaPredicted RBP10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 MESDQ14696 234 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 STXBP2Q15833 593 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 CLEC16AQ2KHT3 1053 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 SPDYCQ5MJ68 293 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 PRAMEF18Q5VWM3 479 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 NAA35Q5VZE5 725 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 C15orf39Q6ZRI6 1047 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 SV2AQ7L0J3 742 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 SLC47A2Q86VL8 602 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 ZNF564Q8TBZ8 553 aaPredicted RBP10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 ATP8B4Q8TF62 1192 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 DDX1Q92499 740 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 DHX38Q92620 1227 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 CD101Q93033 1021 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 ATP6V1G3Q96LB4 118 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 RUNDC3BQ96NL0 473 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 POP1Q99575 1024 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 FAM213AQ9BRX8 229 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 TRIM51Q9BSJ1 452 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 NUP85Q9BW27 656 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 DPH5Q9H2P9 285 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 TMBIM4Q9HC24 238 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.04□□□□□ -0.82e-6■■■■□ 21
CDK5RAP3-208ENST00000578525 ZNF302Q9NR11 478 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 GGA3Q9NZ52 723 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 PPP1R1BQ9UD71 204 aaPredicted RBP10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 TRPC6Q9Y210 931 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 TELO2Q9Y4R8 837 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 STYXL1Q9Y6J8 313 aa10.04□□□□□ -0.8
CDK5RAP3-208ENST00000578525 GOLGA6L10A6NI86 522 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 H0YGN5 161 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 TULP1O00294 542 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 EIF3HO15372 352 aaKnown RBP eCLIP10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 SORBS3O60504 671 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 DLATP10515 647 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 KRT5P13647 590 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 CHRNA3P32297 505 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 CTNNA1P35221 906 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 ARL2P36404 184 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 RFC5P40937 340 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 PTGIRP43119 386 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 NAMPTP43490 491 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 MARCKSL1P49006 195 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 PEX5P50542 639 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 CLDN10P78369 228 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 UAP1Q16222 522 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 WDR44Q5JSH3 913 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 CEP85LQ5SZL2 805 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 AGBL2Q5U5Z8 902 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 EMC10Q5UCC4 262 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 DUPD1Q68J44 220 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 SLFN12LQ6IEE8 588 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 ZNF677Q86XU0 584 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 JAMLQ86YT9 394 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 SH2D3CQ8N5H7 860 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 PROCA1Q8NCQ7 364 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 DEPTORQ8TB45 409 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 ASAP3Q8TDY4 903 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 PSPC1Q8WXF1 523 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 KRT35Q92764 455 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 TATDN2Q93075 761 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 TRIM11Q96F44 468 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 NIFKQ9BYG3 293 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 CELF4Q9BZC1 486 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 DOCK5Q9H7D0 1870 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 ERVK-5Q9HDB9 667 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 AVENQ9NQS1 362 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 C1orf112Q9NSG2 853 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 GPRC5DQ9NZD1 345 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 FBXO40Q9UH90 709 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 FZD1Q9UP38 647 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 NR2E1Q9Y466 385 aa10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 MAFBQ9Y5Q3 323 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP3-208ENST00000578525 NFS1Q9Y697 457 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms