RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 RNF149Q8NC42 400 aa12□□□□□ -0.49
SKA2-204ENST00000578519 TRIM11Q96F44 468 aa12□□□□□ -0.49
SKA2-204ENST00000578519 TINF2Q9BSI4 451 aa12□□□□□ -0.49
SKA2-204ENST00000578519 TARS2Q9BW92 718 aaKnown RBP12□□□□□ -0.49
SKA2-204ENST00000578519 PCDHGC5Q9Y5F6 944 aa12□□□□□ -0.49
SKA2-204ENST00000578519 DUSP10Q9Y6W6 482 aa12□□□□□ -0.49
SKA2-204ENST00000578519 ADGRA3Q8IWK6 1321 aa12□□□□□ -0.49
SKA2-204ENST00000578519 KIAA1217Q5T5P2 1943 aa11.99□□□□□ -0.49
SKA2-204ENST00000578519 DDX3XO00571 662 aaKnown RBP eCLIP11.99□□□□□ -0.49
SKA2-204ENST00000578519 ENC1O14682 589 aa11.99□□□□□ -0.49
SKA2-204ENST00000578519 PALMO75781 387 aa11.99□□□□□ -0.49
SKA2-204ENST00000578519 IL18RAPO95256 599 aa11.99□□□□□ -0.49
SKA2-204ENST00000578519 ABL1P00519 1130 aa11.99□□□□□ -0.49
SKA2-204ENST00000578519 LGALS2P05162 132 aa11.99□□□□□ -0.49
SKA2-204ENST00000578519 KLRC1P26715 233 aa11.99□□□□□ -0.49
SKA2-204ENST00000578519 PIK3CAP42336 1068 aa11.99□□□□□ -0.49
SKA2-204ENST00000578519 ZNF157P51786 506 aaPredicted RBP11.99□□□□□ -0.49
SKA2-204ENST00000578519 SREBF2Q12772 1141 aa11.99□□□□□ -0.49
SKA2-204ENST00000578519 MKRN3Q13064 507 aaKnown RBP11.99□□□□□ -0.49
SKA2-204ENST00000578519 PRPF4BQ13523 1007 aaKnown RBP11.99□□□□□ -0.49
SKA2-204ENST00000578519 ZACNQ401N2 412 aa11.99□□□□□ -0.49
SKA2-204ENST00000578519 C1orf220Q5T0J3 134 aa11.99□□□□□ -0.49
SKA2-204ENST00000578519 GJB7Q6PEY0 223 aa11.99□□□□□ -0.49
SKA2-204ENST00000578519 TAS1R3Q7RTX0 852 aa11.99□□□□□ -0.49
SKA2-204ENST00000578519 RHPN2Q8IUC4 686 aa11.99□□□□□ -0.49
SKA2-204ENST00000578519 WDR49Q8IV35 697 aa11.99□□□□□ -0.49
SKA2-204ENST00000578519 METTL13Q8N6R0 699 aa11.99□□□□□ -0.49
SKA2-204ENST00000578519 OR6J1Q8NGC5 347 aa11.99□□□□□ -0.49
SKA2-204ENST00000578519 SLC30A5Q8TAD4 765 aa11.99□□□□□ -0.49
SKA2-204ENST00000578519 ZNF526Q8TF50 670 aaPredicted RBP11.99□□□□□ -0.49
SKA2-204ENST00000578519 RFFLQ8WZ73 363 aa11.99□□□□□ -0.49
SKA2-204ENST00000578519 SHC3Q92529 594 aa11.99□□□□□ -0.49
SKA2-204ENST00000578519 TSC1Q92574 1164 aa11.99□□□□□ -0.49
SKA2-204ENST00000578519 MAML3Q96JK9 1138 aa11.99□□□□□ -0.49
SKA2-204ENST00000578519 OSBPL9Q96SU4 736 aa11.99□□□□□ -0.49
SKA2-204ENST00000578519 ACO2Q99798 780 aaKnown RBP11.99□□□□□ -0.49
SKA2-204ENST00000578519 ZFYVE28Q9HCC9 887 aa11.99□□□□□ -0.49
SKA2-204ENST00000578519 ARFGAP3Q9NP61 516 aa11.99□□□□□ -0.49
SKA2-204ENST00000578519 ANKFY1Q9P2R3 1169 aa11.99□□□□□ -0.49
SKA2-204ENST00000578519 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.99□□□□□ -0.49
SKA2-204ENST00000578519 V9GYY5 206 aaPredicted RBP11.99□□□□□ -0.49
SKA2-204ENST00000578519 TARSL2A2RTX5 802 aaKnown RBP11.98□□□□□ -0.49
SKA2-204ENST00000578519 CCDC151A5D8V7 595 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 INO80B-WBP1J3KQ70 363 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 FANCGO15287 622 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 BUB1O43683 1085 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 TNNC2P02585 160 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 C4BPAP04003 597 aaKnown RBP11.98□□□□□ -0.49
SKA2-204ENST00000578519 H2AFXP16104 143 aaPredicted RBP11.98□□□□□ -0.49
SKA2-204ENST00000578519 GALCP54803 685 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 PTENP60484 403 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 GPC5P78333 572 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 MCL1Q07820 350 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 MAP2K5Q13163 448 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 GPS2Q13227 327 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 PCBP1Q15365 356 aaKnown RBP eCLIP11.98□□□□□ -0.491e-6■■■■□ 22.1
SKA2-204ENST00000578519 TAF1CQ15572 869 aaPredicted RBP11.98□□□□□ -0.49
SKA2-204ENST00000578519 FAM187BQ17R55 369 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 DUOXA2Q1HG44 320 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 GLE1Q53GS7 698 aaKnown RBP11.98□□□□□ -0.49
SKA2-204ENST00000578519 MEI1Q5TIA1 1274 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 MPZL3Q6UWV2 235 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 TRIM72Q6ZMU5 477 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 TSHZ1Q6ZSZ6 1077 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 IFNLR1Q8IU57 520 aaPredicted RBP11.98□□□□□ -0.49
SKA2-204ENST00000578519 GLYCTKQ8IVS8 523 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 ARHGEF19Q8IW93 802 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 BRSK2Q8IWQ3 736 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 MSANTD4Q8NCY6 345 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 PLEKHO2Q8TD55 490 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 CCDC102AQ96A19 550 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 FAXDC2Q96IV6 333 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 ANKRD36BP1Q96IX9 119 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 INO80BQ9C086 356 aaPredicted RBP11.98□□□□□ -0.49
SKA2-204ENST00000578519 ACBD3Q9H3P7 528 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 FZD8Q9H461 694 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 PDGFCQ9NRA1 345 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 AMFRQ9UKV5 643 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 TELO2Q9Y4R8 837 aa11.98□□□□□ -0.49
SKA2-204ENST00000578519 MYH9P35579 1960 aaKnown RBP11.98□□□□□ -0.49
SKA2-204ENST00000578519 A0A0U1RQG5 324 aaPredicted RBP11.97□□□□□ -0.49
SKA2-204ENST00000578519 H3BRB1 525 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 MSCO60682 206 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 LRRN2O75325 713 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 CLSTN1O94985 981 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 HLA-DRAP01903 254 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 INSRRP14616 1297 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 RGS2P41220 211 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 HADHBP55084 474 aaKnown RBP11.97□□□□□ -0.49
SKA2-204ENST00000578519 TRPC3Q13507 836 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 TCEAL1Q15170 157 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 PPP2R5EQ16537 467 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 ATF7IP2Q5U623 682 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 RGMBQ6NW40 437 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 C15orf39Q6ZRI6 1047 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 ZNF572Q7Z3I7 529 aaPredicted RBP11.97□□□□□ -0.49
SKA2-204ENST00000578519 PEX26Q7Z412 305 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 ZNF410Q86VK4 478 aa11.97□□□□□ -0.49
SKA2-204ENST00000578519 RPUSD2Q8IZ73 545 aaKnown RBP11.97□□□□□ -0.49
SKA2-204ENST00000578519 MMGT1Q8N4V1 131 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms