RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 PRKCBP05771 671 aa15.99■□□□□ 0.15
SMARCE1-213ENST00000578044 CCT6AP40227 531 aaKnown RBP15.99■□□□□ 0.15
SMARCE1-213ENST00000578044 KRT79Q5XKE5 535 aa15.99■□□□□ 0.15
SMARCE1-213ENST00000578044 FUT10Q6P4F1 479 aa15.99■□□□□ 0.15
SMARCE1-213ENST00000578044 TDRD5Q8NAT2 981 aaKnown RBP15.99■□□□□ 0.15
SMARCE1-213ENST00000578044 DEPTORQ8TB45 409 aa15.99■□□□□ 0.15
SMARCE1-213ENST00000578044 NXPE3Q969Y0 559 aa15.99■□□□□ 0.15
SMARCE1-213ENST00000578044 PBXIP1Q96AQ6 731 aa15.99■□□□□ 0.15
SMARCE1-213ENST00000578044 ACSF2Q96CM8 615 aaPredicted RBP15.99■□□□□ 0.15
SMARCE1-213ENST00000578044 BHMT2Q9H2M3 363 aa15.99■□□□□ 0.15
SMARCE1-213ENST00000578044 ZDHHC7Q9NXF8 308 aa15.99■□□□□ 0.15
SMARCE1-213ENST00000578044 TNFSF13BQ9Y275 285 aa15.99■□□□□ 0.15
SMARCE1-213ENST00000578044 PLXNA3P51805 1871 aa15.99■□□□□ 0.15
SMARCE1-213ENST00000578044 C2CD4DB7Z1M9 353 aa15.98■□□□□ 0.15
SMARCE1-213ENST00000578044 BRD1O95696 1058 aa15.98■□□□□ 0.15
SMARCE1-213ENST00000578044 GLUD1P00367 558 aa15.98■□□□□ 0.15
SMARCE1-213ENST00000578044 THP07101 528 aa15.98■□□□□ 0.15
SMARCE1-213ENST00000578044 FOSBP53539 338 aa15.98■□□□□ 0.15
SMARCE1-213ENST00000578044 ATP2C1P98194 919 aaPredicted RBP15.98■□□□□ 0.15
SMARCE1-213ENST00000578044 HSP90AA2PQ14568 343 aaPredicted RBP15.98■□□□□ 0.15
SMARCE1-213ENST00000578044 NAB2Q15742 525 aa15.98■□□□□ 0.15
SMARCE1-213ENST00000578044 ECM1Q16610 540 aa15.98■□□□□ 0.15
SMARCE1-213ENST00000578044 RARS2Q5T160 578 aaKnown RBP15.98■□□□□ 0.15
SMARCE1-213ENST00000578044 LILRA6Q6PI73 481 aa15.98■□□□□ 0.15
SMARCE1-213ENST00000578044 DTHD1Q6ZMT9 781 aa15.98■□□□□ 0.15
SMARCE1-213ENST00000578044 CCDC149Q6ZUS6 474 aa15.98■□□□□ 0.15
SMARCE1-213ENST00000578044 SUGP1Q8IWZ8 645 aaKnown RBP15.98■□□□□ 0.15
SMARCE1-213ENST00000578044 BSNDQ8WZ55 320 aa15.98■□□□□ 0.15
SMARCE1-213ENST00000578044 DRC1Q96MC2 740 aa15.98■□□□□ 0.15
SMARCE1-213ENST00000578044 UPF2Q9HAU5 1272 aaKnown RBP15.98■□□□□ 0.15
SMARCE1-213ENST00000578044 KIAA1024Q9UPX6 916 aa15.98■□□□□ 0.15
SMARCE1-213ENST00000578044 PRG3Q9Y2Y8 225 aaPredicted RBP15.98■□□□□ 0.15
SMARCE1-213ENST00000578044 PCDHB6Q9Y5E3 794 aa15.98■□□□□ 0.15
SMARCE1-213ENST00000578044 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.98■□□□□ 0.15
SMARCE1-213ENST00000578044 POU2F2P09086 479 aa15.97■□□□□ 0.15
SMARCE1-213ENST00000578044 AKAP5P24588 427 aa15.97■□□□□ 0.15
SMARCE1-213ENST00000578044 GUCY2CP25092 1073 aa15.97■□□□□ 0.15
SMARCE1-213ENST00000578044 CA8P35219 290 aa15.97■□□□□ 0.15
SMARCE1-213ENST00000578044 XKR4Q5GH76 650 aa15.97■□□□□ 0.15
SMARCE1-213ENST00000578044 KREMEN2Q8NCW0 462 aa15.97■□□□□ 0.15
SMARCE1-213ENST00000578044 SNX29Q8TEQ0 813 aa15.97■□□□□ 0.15
SMARCE1-213ENST00000578044 PIK3R5Q8WYR1 880 aa15.97■□□□□ 0.15
SMARCE1-213ENST00000578044 STAMQ92783 540 aa15.97■□□□□ 0.15
SMARCE1-213ENST00000578044 TMX3Q96JJ7 454 aa15.97■□□□□ 0.15
SMARCE1-213ENST00000578044 UROC1Q96N76 676 aa15.97■□□□□ 0.15
SMARCE1-213ENST00000578044 NT5C3AQ9H0P0 336 aa15.97■□□□□ 0.15
SMARCE1-213ENST00000578044 WDR6Q9NNW5 1121 aaKnown RBP15.97■□□□□ 0.15
SMARCE1-213ENST00000578044 DDX19AQ9NUU7 478 aaKnown RBP15.97■□□□□ 0.15
SMARCE1-213ENST00000578044 IGSF9Q9P2J2 1179 aa15.97■□□□□ 0.15
SMARCE1-213ENST00000578044 ARHGAP28Q9P2N2 729 aa15.97■□□□□ 0.15
SMARCE1-213ENST00000578044 K7ERI5 159 aa15.96■□□□□ 0.15
SMARCE1-213ENST00000578044 PTGESO14684 152 aa15.96■□□□□ 0.15
SMARCE1-213ENST00000578044 RECQL4O94761 1208 aa15.96■□□□□ 0.15
SMARCE1-213ENST00000578044 HOXA9P31269 272 aa15.96■□□□□ 0.15
SMARCE1-213ENST00000578044 C1orf186Q6ZWK4 172 aa15.96■□□□□ 0.15
SMARCE1-213ENST00000578044 MAEAQ7L5Y9 396 aa15.96■□□□□ 0.15
SMARCE1-213ENST00000578044 SPIRE2Q8WWL2 714 aa15.96■□□□□ 0.15
SMARCE1-213ENST00000578044 AK8Q96MA6 479 aa15.96■□□□□ 0.15
SMARCE1-213ENST00000578044 GPR62Q9BZJ7 368 aa15.96■□□□□ 0.15
SMARCE1-213ENST00000578044 PTPRHQ9HD43 1115 aa15.96■□□□□ 0.15
SMARCE1-213ENST00000578044 MAN1C1Q9NR34 630 aa15.96■□□□□ 0.15
SMARCE1-213ENST00000578044 PARP2Q9UGN5 583 aa15.96■□□□□ 0.15
SMARCE1-213ENST00000578044 ZFP37Q9Y6Q3 630 aaPredicted RBP15.96■□□□□ 0.15
SMARCE1-213ENST00000578044 VWA8A3KMH1 1905 aa15.96■□□□□ 0.14
SMARCE1-213ENST00000578044 A0A087WWV3 80 aa15.95■□□□□ 0.14
SMARCE1-213ENST00000578044 TADA2AO75478 443 aa15.95■□□□□ 0.14
SMARCE1-213ENST00000578044 BMP15O95972 392 aa15.95■□□□□ 0.14
SMARCE1-213ENST00000578044 PROZP22891 400 aa15.95■□□□□ 0.14
SMARCE1-213ENST00000578044 NPTX2P47972 431 aa15.95■□□□□ 0.14
SMARCE1-213ENST00000578044 PTPN5P54829 565 aa15.95■□□□□ 0.14
SMARCE1-213ENST00000578044 NHLH1Q02575 133 aa15.95■□□□□ 0.14
SMARCE1-213ENST00000578044 DMP1Q13316 513 aaPredicted RBP15.95■□□□□ 0.14
SMARCE1-213ENST00000578044 ATF7IP2Q5U623 682 aa15.95■□□□□ 0.14
SMARCE1-213ENST00000578044 ALKAL1Q6UXT8 129 aa15.95■□□□□ 0.14
SMARCE1-213ENST00000578044 TMC5Q6UXY8 1006 aa15.95■□□□□ 0.14
SMARCE1-213ENST00000578044 TAS1R1Q7RTX1 841 aa15.95■□□□□ 0.14
SMARCE1-213ENST00000578044 C12orf76Q8N812 135 aaPredicted RBP15.95■□□□□ 0.14
SMARCE1-213ENST00000578044 TTPALQ9BTX7 342 aa15.95■□□□□ 0.14
SMARCE1-213ENST00000578044 MMTAG2Q9BU76 263 aaKnown RBP15.95■□□□□ 0.14
SMARCE1-213ENST00000578044 APOL6Q9BWW8 343 aa15.95■□□□□ 0.14
SMARCE1-213ENST00000578044 APOL5Q9BWW9 433 aa15.95■□□□□ 0.14
SMARCE1-213ENST00000578044 TOPORSQ9NS56 1045 aaPredicted RBP15.95■□□□□ 0.14
SMARCE1-213ENST00000578044 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.95■□□□□ 0.14
SMARCE1-213ENST00000578044 EPS15L1Q9UBC2 864 aa15.95■□□□□ 0.14
SMARCE1-213ENST00000578044 TTLL13PA6NNM8 815 aa15.94■□□□□ 0.14
SMARCE1-213ENST00000578044 HNRNPA1P09651 372 aaKnown RBP eCLIP15.94■□□□□ 0.14
SMARCE1-213ENST00000578044 GRM5P41594 1212 aa15.94■□□□□ 0.14
SMARCE1-213ENST00000578044 IL17AQ16552 155 aa15.94■□□□□ 0.14
SMARCE1-213ENST00000578044 UVSSAQ2YD98 709 aa15.94■□□□□ 0.14
SMARCE1-213ENST00000578044 NT5DC1Q5TFE4 455 aa15.94■□□□□ 0.14
SMARCE1-213ENST00000578044 RINT1Q6NUQ1 792 aa15.94■□□□□ 0.14
SMARCE1-213ENST00000578044 DCLRE1AQ6PJP8 1040 aa15.94■□□□□ 0.14
SMARCE1-213ENST00000578044 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.94■□□□□ 0.14
SMARCE1-213ENST00000578044 ZBTB33Q86T24 672 aa15.94■□□□□ 0.14
SMARCE1-213ENST00000578044 DAW1Q8N136 415 aa15.94■□□□□ 0.14
SMARCE1-213ENST00000578044 DDX27Q96GQ7 796 aaKnown RBP15.94■□□□□ 0.14
SMARCE1-213ENST00000578044 PPP1R10Q96QC0 940 aaKnown RBP15.94■□□□□ 0.14
SMARCE1-213ENST00000578044 ACO2Q99798 780 aaKnown RBP15.94■□□□□ 0.14
SMARCE1-213ENST00000578044 MRPL4Q9BYD3 311 aaKnown RBP15.94■□□□□ 0.14
SMARCE1-213ENST00000578044 PRKD2Q9BZL6 878 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms