RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 MFSD4BQ5TF39 518 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 SPRYD7Q5W111 196 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 ITPRIPL1Q6GPH6 555 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 JADE1Q6IE81 842 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 KLC3Q6P597 504 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 HERC6Q8IVU3 1022 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 LRRC71Q8N4P6 559 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 SPATA18Q8TC71 538 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 ASAP3Q8TDY4 903 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 DHTKD1Q96HY7 919 aaPredicted RBP3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 HIST1H2AHQ96KK5 128 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 SPACA7Q96KW9 195 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 CDK5RAP1Q96SZ6 601 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 HIST1H2AJQ99878 128 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 H2AFJQ9BTM1 129 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 APOL5Q9BWW9 433 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 COG4Q9H9E3 785 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 GRPEL1Q9HAV7 217 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 SMYD2Q9NRG4 433 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 AASDHPPTQ9NRN7 309 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 RGL1Q9NZL6 768 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 HACD3Q9P035 362 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 SLC30A1Q9Y6M5 507 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 SPACA6W5XKT8 324 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 FAM47E-STBD1D6RA91 191 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 IRF6O14896 467 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 EIF3DO15371 548 aaKnown RBP eCLIP3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 MYO1DO94832 1006 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 CPP00450 1065 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 ATP5BP06576 529 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 CLTAP09496 248 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 HSPA8P11142 646 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 ELNP15502 786 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 LAG3P18627 525 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 OAZ1P54368 228 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 LRRC41Q15345 812 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 ALX1Q15699 326 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 FAM110CQ1W6H9 321 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 DNAJC21Q5F1R6 531 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 RABGAP1LQ5R372 815 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 ARL6IP4Q66PJ3 421 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 LLGL2Q6P1M3 1020 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 PRR23BQ6ZRT6 265 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 FBXO18Q8NFZ0 1043 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 UBLCP1Q8WVY7 318 aaPredicted RBP3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 IL17RAQ96F46 866 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 TAAR1Q96RJ0 339 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 RIT2Q99578 217 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 SENP7Q9BQF6 1050 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 HAUS8Q9BT25 410 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 C11orf84Q9BUA3 381 aaPredicted RBP3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 TRIM31Q9BZY9 425 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 CPVLQ9H3G5 476 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 PLEKHA5Q9HAU0 1116 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 TUFT1Q9NNX1 390 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 LZTFL1Q9NQ48 299 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 UTP6Q9NYH9 597 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 TLR7Q9NYK1 1049 aaKnown RBP3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 SENP1Q9P0U3 644 aa3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.12□□□□□ -1.91
SMCHD1-203ENST00000577880 PNPLA7Q6ZV29 1317 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 QSER1Q2KHR3 1735 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 SGK1O00141 431 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 JAK2O60674 1132 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 SNX2O60749 519 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 LRRN2O75325 713 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 CXCL14O95715 111 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 INHAP05111 366 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 SERPIND1P05546 499 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 TUBBP07437 444 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 VIL1P09327 827 aaKnown RBP3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 SKILP12757 684 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 ACADSBP45954 432 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 FKBP1AP62942 108 aaKnown RBP3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 PRAMEP78395 509 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 LAMB3Q13751 1172 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 MESDQ14696 234 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 TEAD4Q15561 434 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 PFKFB3Q16875 520 aaPredicted RBP3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 NOL9Q5SY16 702 aaKnown RBP3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 FAM171A1Q5VUB5 890 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 TMEM270Q6UE05 265 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 METTL7BQ6UX53 244 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 OTOP2Q7RTS6 562 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 ZNF438Q7Z4V0 828 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 RBM23Q86U06 439 aaKnown RBP3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 CCDC170Q8IYT3 715 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 STAG2Q8N3U4 1231 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 PDCL2Q8N4E4 241 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 CEP120Q8N960 986 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 FLCNQ8NFG4 579 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 ARL8AQ96BM9 186 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 MAGEB10Q96LZ2 347 aaPredicted RBP3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 EGFL8Q99944 293 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 MXRA8Q9BRK3 442 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 RAB17Q9H0T7 212 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 ASAH2Q9NR71 780 aa3.11□□□□□ -1.91
SMCHD1-203ENST00000577880 TYW1Q9NV66 732 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms