RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 PPM1LQ5SGD2 360 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 ZBTB41Q5SVQ8 909 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 FAM171A1Q5VUB5 890 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 POTEHQ6S545 545 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 EXOC8Q8IYI6 725 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 GPR65Q8IYL9 337 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 GPR161Q8N6U8 529 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 TCP11Q8WWU5 503 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 BORCS6Q96GS4 357 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 C22orf23Q9BZE7 217 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 OSBPL6Q9BZF3 934 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 PLA2G2FQ9BZM2 168 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 TRIM6Q9C030 488 aaPredicted RBP11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 PARD6AQ9NPB6 346 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 XPNPEP1Q9NQW7 623 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 HCFC1R1Q9NWW0 138 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 ZSCAN32Q9NX65 697 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 PARP2Q9UGN5 583 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 USP18Q9UMW8 372 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 SMG5Q9UPR3 1016 aaKnown RBP11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 PCDHGA2Q9Y5H1 932 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 MIA3Q5JRA6 1907 aa11.26□□□□□ -0.61
NPLOC4-220ENST00000576940 PRR5-ARHGAP8B1AHC4 643 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 DKC1O60832 514 aaKnown RBP eCLIP11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 NPTXRO95502 500 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 SDHBP21912 280 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 IGFBP6P24592 240 aaPredicted RBP11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 ARHGAP8P85298 464 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 MBTD1Q05BQ5 628 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 HSP90AA2PQ14568 343 aaPredicted RBP11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 EPHA7Q15375 998 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 NPY5RQ15761 445 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 LPAL2Q16609 132 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 LIN9Q5TKA1 542 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 BLOC1S2Q6QNY1 142 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 MOXD1Q6UVY6 613 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 TPRG1Q6ZUI0 275 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 MTSS1LQ765P7 747 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 OTUD6AQ7L8S5 288 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 C4orf19Q8IY42 314 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 ASAP3Q8TDY4 903 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 NELL1Q92832 810 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 HAS1Q92839 578 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 CLDN23Q96B33 292 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 CCDC51Q96ER9 411 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 MCRS1Q96EZ8 462 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 DYDC2Q96IM9 177 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 AIFM3Q96NN9 605 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 MTRQ99707 1265 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 LXNQ9BS40 222 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 TTPALQ9BTX7 342 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 PHF20Q9BVI0 1012 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 CXCL16Q9H2A7 254 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 EPC1Q9H2F5 836 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 KCNMB3Q9NPA1 279 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 DNMT3BQ9UBC3 853 aaKnown RBP11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 CDV3Q9UKY7 258 aaKnown RBP11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 SNX14Q9Y5W7 946 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 NID2Q14112 1375 aa11.25□□□□□ -0.61
NPLOC4-220ENST00000576940 A0A087WWV3 80 aa11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 A0A1B0GUA9 196 aa11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 CASTOR2A6NHX0 329 aa11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 SHISA7A6NL88 538 aa11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 SLITRK3O94933 977 aa11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 HNRNPA1P09651 372 aaKnown RBP eCLIP11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 RPS6KB1P23443 525 aa11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 PFKPQ01813 784 aa11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 CYP4A11Q02928 519 aa11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 CREMQ03060 361 aa11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 LMNB2Q03252 620 aa11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 SSRP1Q08945 709 aaKnown RBP11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 GRIK3Q13003 919 aa11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 MTAPQ13126 283 aa11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 PCBP1Q15365 356 aaKnown RBP eCLIP11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 PSMD5Q16401 504 aa11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 NCAPH2Q6IBW4 605 aa11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 RSPO2Q6UXX9 243 aaPredicted RBP11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 TPH2Q8IWU9 490 aa11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 SLC7A14Q8TBB6 771 aa11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 ING5Q8WYH8 240 aa11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 KCNB2Q92953 911 aa11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 SECISBP2LQ93073 1101 aaKnown RBP11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 FAM20AQ96MK3 541 aa11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 NELL2Q99435 816 aa11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 LARP6Q9BRS8 491 aaKnown RBP11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 RTKNQ9BST9 563 aa11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 AGXT2Q9BYV1 514 aa11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 HEBP1Q9NRV9 189 aa11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 KCNJ14Q9UNX9 436 aa11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 PPME1Q9Y570 386 aa11.24□□□□□ -0.61
NPLOC4-220ENST00000576940 NOTCH4Q99466 2003 aa11.23□□□□□ -0.61
NPLOC4-220ENST00000576940 NCAM2O15394 837 aa11.23□□□□□ -0.61
NPLOC4-220ENST00000576940 MARCH6O60337 910 aa11.23□□□□□ -0.61
NPLOC4-220ENST00000576940 TBC1D4O60343 1298 aa11.23□□□□□ -0.61
NPLOC4-220ENST00000576940 XYLBO75191 536 aa11.23□□□□□ -0.61
NPLOC4-220ENST00000576940 KIF4AO95239 1232 aa11.23□□□□□ -0.61
NPLOC4-220ENST00000576940 GLRA2P23416 452 aa11.23□□□□□ -0.61
NPLOC4-220ENST00000576940 OR1D2P34982 312 aa11.23□□□□□ -0.61
NPLOC4-220ENST00000576940 ARL2P36404 184 aa11.23□□□□□ -0.61
NPLOC4-220ENST00000576940 SPEM2Q0P670 501 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms