RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 PHF20Q9BVI0 1012 aa12.93□□□□□ -0.34
CTDNEP1-212ENST00000576613 BCO2Q9BYV7 579 aa12.93□□□□□ -0.34
CTDNEP1-212ENST00000576613 FOXQ1Q9C009 403 aa12.93□□□□□ -0.34
CTDNEP1-212ENST00000576613 ZSWIM6Q9HCJ5 1215 aa12.93□□□□□ -0.34
CTDNEP1-212ENST00000576613 XPNPEP1Q9NQW7 623 aa12.93□□□□□ -0.34
CTDNEP1-212ENST00000576613 CDH7Q9ULB5 785 aa12.93□□□□□ -0.34
CTDNEP1-212ENST00000576613 MED19A0JLT2 244 aaPredicted RBP12.92□□□□□ -0.34
CTDNEP1-212ENST00000576613 ZBTB39O15060 712 aa12.92□□□□□ -0.34
CTDNEP1-212ENST00000576613 XYLBO75191 536 aa12.92□□□□□ -0.34
CTDNEP1-212ENST00000576613 NPTXRO95502 500 aa12.92□□□□□ -0.34
CTDNEP1-212ENST00000576613 HOXA9P31269 272 aa12.92□□□□□ -0.34
CTDNEP1-212ENST00000576613 PFKPQ01813 784 aa12.92□□□□□ -0.34
CTDNEP1-212ENST00000576613 SPIRE1Q08AE8 756 aa12.92□□□□□ -0.34
CTDNEP1-212ENST00000576613 STK3Q13188 491 aa12.92□□□□□ -0.34
CTDNEP1-212ENST00000576613 AMHR2Q16671 573 aa12.92□□□□□ -0.34
CTDNEP1-212ENST00000576613 ZNF528Q3MIS6 628 aa12.92□□□□□ -0.34
CTDNEP1-212ENST00000576613 RTP2Q5QGT7 225 aa12.92□□□□□ -0.34
CTDNEP1-212ENST00000576613 PPM1LQ5SGD2 360 aa12.92□□□□□ -0.34
CTDNEP1-212ENST00000576613 PDXDC1Q6P996 788 aa12.92□□□□□ -0.34
CTDNEP1-212ENST00000576613 PIK3AP1Q6ZUJ8 805 aa12.92□□□□□ -0.34
CTDNEP1-212ENST00000576613 GSTCDQ8NEC7 633 aa12.92□□□□□ -0.34
CTDNEP1-212ENST00000576613 FGF14Q92915 247 aa12.92□□□□□ -0.34
CTDNEP1-212ENST00000576613 TTPALQ9BTX7 342 aa12.92□□□□□ -0.34
CTDNEP1-212ENST00000576613 ANKEF1Q9NU02 776 aa12.92□□□□□ -0.34
CTDNEP1-212ENST00000576613 PARP2Q9UGN5 583 aa12.92□□□□□ -0.34
CTDNEP1-212ENST00000576613 FBXW11Q9UKB1 542 aa12.92□□□□□ -0.34
CTDNEP1-212ENST00000576613 OTOGLQ3ZCN5 2332 aa12.91□□□□□ -0.34
CTDNEP1-212ENST00000576613 PATJQ8NI35 1801 aa12.91□□□□□ -0.34
CTDNEP1-212ENST00000576613 A0A1B0GUA9 196 aa12.91□□□□□ -0.34
CTDNEP1-212ENST00000576613 KANSL1LA0AUZ9 987 aa12.91□□□□□ -0.34
CTDNEP1-212ENST00000576613 SPTLC1O15269 473 aa12.91□□□□□ -0.34
CTDNEP1-212ENST00000576613 B4GALT5O43286 388 aa12.91□□□□□ -0.34
CTDNEP1-212ENST00000576613 LAMTOR5O43504 91 aa12.91□□□□□ -0.34
CTDNEP1-212ENST00000576613 SLITRK3O94933 977 aa12.91□□□□□ -0.34
CTDNEP1-212ENST00000576613 C8AP07357 584 aa12.91□□□□□ -0.34
CTDNEP1-212ENST00000576613 GLULP15104 373 aa12.91□□□□□ -0.34
CTDNEP1-212ENST00000576613 ARL2P36404 184 aa12.91□□□□□ -0.34
CTDNEP1-212ENST00000576613 GPC5P78333 572 aa12.91□□□□□ -0.34
CTDNEP1-212ENST00000576613 PRKCQQ04759 706 aa12.91□□□□□ -0.34
CTDNEP1-212ENST00000576613 TUSC3Q13454 348 aa12.91□□□□□ -0.34
CTDNEP1-212ENST00000576613 SNW1Q13573 536 aaKnown RBP12.91□□□□□ -0.34
CTDNEP1-212ENST00000576613 PRSS55Q6UWB4 352 aaPredicted RBP12.91□□□□□ -0.34
CTDNEP1-212ENST00000576613 PARM1Q6UWI2 310 aa12.91□□□□□ -0.34
CTDNEP1-212ENST00000576613 ASAP3Q8TDY4 903 aa12.91□□□□□ -0.34
CTDNEP1-212ENST00000576613 PIK3R5Q8WYR1 880 aa12.91□□□□□ -0.34
CTDNEP1-212ENST00000576613 RABGGTAQ92696 567 aa12.91□□□□□ -0.34
CTDNEP1-212ENST00000576613 FGF13Q92913 245 aa12.91□□□□□ -0.34
CTDNEP1-212ENST00000576613 EIF2AK1Q9BQI3 630 aaKnown RBP12.91□□□□□ -0.34
CTDNEP1-212ENST00000576613 SPATA6Q9NWH7 488 aaPredicted RBP12.91□□□□□ -0.34
CTDNEP1-212ENST00000576613 KLK14Q9P0G3 267 aa12.91□□□□□ -0.34
CTDNEP1-212ENST00000576613 FBXO4Q9UKT5 387 aa12.91□□□□□ -0.34
CTDNEP1-212ENST00000576613 PCDHA12Q9UN75 941 aa12.91□□□□□ -0.34
CTDNEP1-212ENST00000576613 POLIQ9UNA4 740 aa12.91□□□□□ -0.34
CTDNEP1-212ENST00000576613 STK36Q9NRP7 1315 aa12.9□□□□□ -0.34
CTDNEP1-212ENST00000576613 POTEMA6NI47 508 aa12.9□□□□□ -0.34
CTDNEP1-212ENST00000576613 EPB41L2O43491 1005 aaKnown RBP12.9□□□□□ -0.34
CTDNEP1-212ENST00000576613 LYPLA2O95372 231 aa12.9□□□□□ -0.34
CTDNEP1-212ENST00000576613 GLRA2P23416 452 aa12.9□□□□□ -0.34
CTDNEP1-212ENST00000576613 MAGEA9P43362 315 aa12.9□□□□□ -0.34
CTDNEP1-212ENST00000576613 ELAVL2Q12926 359 aaKnown RBP12.9□□□□□ -0.34
CTDNEP1-212ENST00000576613 UBXN2BQ14CS0 331 aa12.9□□□□□ -0.34
CTDNEP1-212ENST00000576613 MLF2Q15773 248 aaPredicted RBP12.9□□□□□ -0.34
CTDNEP1-212ENST00000576613 PSMD5Q16401 504 aa12.9□□□□□ -0.34
CTDNEP1-212ENST00000576613 FAM171A1Q5VUB5 890 aa12.9□□□□□ -0.34
CTDNEP1-212ENST00000576613 POTEGQ6S5H5 508 aa12.9□□□□□ -0.34
CTDNEP1-212ENST00000576613 RSPO2Q6UXX9 243 aaPredicted RBP12.9□□□□□ -0.34
CTDNEP1-212ENST00000576613 CDR2LQ86X02 465 aaPredicted RBP12.9□□□□□ -0.34
CTDNEP1-212ENST00000576613 CEP57Q86XR8 500 aa12.9□□□□□ -0.34
CTDNEP1-212ENST00000576613 SUMF1Q8NBK3 374 aa12.9□□□□□ -0.34
CTDNEP1-212ENST00000576613 ST13P5Q8NFI4 369 aaPredicted RBP12.9□□□□□ -0.34
CTDNEP1-212ENST00000576613 HASPINQ8TF76 798 aa12.9□□□□□ -0.34
CTDNEP1-212ENST00000576613 SECISBP2LQ93073 1101 aaKnown RBP12.9□□□□□ -0.34
CTDNEP1-212ENST00000576613 PRIMPOLQ96LW4 560 aa12.9□□□□□ -0.34
CTDNEP1-212ENST00000576613 CLSTN3Q9BQT9 956 aa12.9□□□□□ -0.34
CTDNEP1-212ENST00000576613 RPP25Q9BUL9 199 aaKnown RBP12.9□□□□□ -0.34
CTDNEP1-212ENST00000576613 DDX23Q9BUQ8 820 aaKnown RBP12.9□□□□□ -0.34
CTDNEP1-212ENST00000576613 OSBPL6Q9BZF3 934 aa12.9□□□□□ -0.34
CTDNEP1-212ENST00000576613 PRMT7Q9NVM4 692 aaPredicted RBP12.9□□□□□ -0.34
CTDNEP1-212ENST00000576613 DLL3Q9NYJ7 618 aa12.9□□□□□ -0.34
CTDNEP1-212ENST00000576613 NCDNQ9UBB6 729 aa12.9□□□□□ -0.34
CTDNEP1-212ENST00000576613 CEP250Q9BV73 2442 aa12.89□□□□□ -0.35
CTDNEP1-212ENST00000576613 CASTOR2A6NHX0 329 aa12.89□□□□□ -0.35
CTDNEP1-212ENST00000576613 LRRIQ4A6NIV6 560 aa12.89□□□□□ -0.35
CTDNEP1-212ENST00000576613 CCL16O15467 120 aa12.89□□□□□ -0.35
CTDNEP1-212ENST00000576613 LRRN2O75325 713 aa12.89□□□□□ -0.35
CTDNEP1-212ENST00000576613 KIF4AO95239 1232 aa12.89□□□□□ -0.35
CTDNEP1-212ENST00000576613 THP07101 528 aa12.89□□□□□ -0.35
CTDNEP1-212ENST00000576613 POU2F2P09086 479 aa12.89□□□□□ -0.35
CTDNEP1-212ENST00000576613 SDHBP21912 280 aa12.89□□□□□ -0.35
CTDNEP1-212ENST00000576613 RARRES1P49788 294 aa12.89□□□□□ -0.35
CTDNEP1-212ENST00000576613 NTHL1P78549 312 aa12.89□□□□□ -0.35
CTDNEP1-212ENST00000576613 TMEM132AQ24JP5 1023 aa12.89□□□□□ -0.35
CTDNEP1-212ENST00000576613 SLC44A4Q53GD3 710 aa12.89□□□□□ -0.35
CTDNEP1-212ENST00000576613 ZBTB8OSQ8IWT0 167 aa12.89□□□□□ -0.35
CTDNEP1-212ENST00000576613 MAML2Q8IZL2 1156 aaPredicted RBP12.89□□□□□ -0.35
CTDNEP1-212ENST00000576613 DCLK2Q8N568 766 aa12.89□□□□□ -0.35
CTDNEP1-212ENST00000576613 GPR161Q8N6U8 529 aaKnown RBP12.89□□□□□ -0.35
CTDNEP1-212ENST00000576613 LNX1Q8TBB1 728 aaPredicted RBP12.89□□□□□ -0.35
CTDNEP1-212ENST00000576613 SLC7A14Q8TBB6 771 aa12.89□□□□□ -0.35
CTDNEP1-212ENST00000576613 OXER1Q8TDS5 423 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms