RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 F8VZ95 297 aa19■□□□□ 0.63
ATPAF1-214ENST00000576409 CRCPO75575 148 aa19■□□□□ 0.63
ATPAF1-214ENST00000576409 SGPL1O95470 568 aa19■□□□□ 0.63
ATPAF1-214ENST00000576409 RALAP11233 206 aa19■□□□□ 0.63
ATPAF1-214ENST00000576409 COILP38432 576 aaPredicted RBP19■□□□□ 0.63
ATPAF1-214ENST00000576409 RINT1Q6NUQ1 792 aa19■□□□□ 0.63
ATPAF1-214ENST00000576409 OPLAHO14841 1288 aa19■□□□□ 0.63
ATPAF1-214ENST00000576409 FANCGO15287 622 aa19■□□□□ 0.63
ATPAF1-214ENST00000576409 SLC13A5Q86YT5 568 aaPredicted RBP19■□□□□ 0.63
ATPAF1-214ENST00000576409 SYN2Q92777 582 aaPredicted RBP19■□□□□ 0.63
ATPAF1-214ENST00000576409 HEXIM2Q96MH2 286 aaKnown RBP19■□□□□ 0.63
ATPAF1-214ENST00000576409 CBWD1Q9BRT8 395 aa19■□□□□ 0.63
ATPAF1-214ENST00000576409 NEU2Q9Y3R4 380 aa19■□□□□ 0.63
ATPAF1-214ENST00000576409 A6NJR5 290 aa18.99■□□□□ 0.63
ATPAF1-214ENST00000576409 MAP3K6O95382 1288 aa18.99■□□□□ 0.63
ATPAF1-214ENST00000576409 NOP14P78316 857 aaKnown RBP18.99■□□□□ 0.63
ATPAF1-214ENST00000576409 SPATA20Q8TB22 786 aa18.99■□□□□ 0.63
ATPAF1-214ENST00000576409 LPXNO60711 386 aa18.99■□□□□ 0.63
ATPAF1-214ENST00000576409 NOL3O60936 208 aaKnown RBP18.99■□□□□ 0.63
ATPAF1-214ENST00000576409 GIT2Q14161 759 aa18.99■□□□□ 0.63
ATPAF1-214ENST00000576409 SMTNL2Q2TAL5 461 aa18.99■□□□□ 0.63
ATPAF1-214ENST00000576409 ATXN7L3BQ96GX2 97 aa18.99■□□□□ 0.63
ATPAF1-214ENST00000576409 AGPAT3Q9NRZ7 376 aa18.99■□□□□ 0.63
ATPAF1-214ENST00000576409 FBXO28Q9NVF7 368 aa18.99■□□□□ 0.63
ATPAF1-214ENST00000576409 IQANK1A0A1B0GTG1 560 aa18.99■□□□□ 0.63
ATPAF1-214ENST00000576409 MSH4O15457 936 aa18.99■□□□□ 0.63
ATPAF1-214ENST00000576409 MMEL1Q495T6 779 aa18.99■□□□□ 0.63
ATPAF1-214ENST00000576409 LDHDQ86WU2 507 aa18.99■□□□□ 0.63
ATPAF1-214ENST00000576409 TMEM35BQ8NCS4 154 aa18.99■□□□□ 0.63
ATPAF1-214ENST00000576409 OSBPL8Q9BZF1 889 aa18.99■□□□□ 0.63
ATPAF1-214ENST00000576409 SHCBP1LQ9BZQ2 653 aa18.99■□□□□ 0.63
ATPAF1-214ENST00000576409 CASQ2O14958 399 aaPredicted RBP18.98■□□□□ 0.63
ATPAF1-214ENST00000576409 PRPSAP2O60256 369 aa18.98■□□□□ 0.63
ATPAF1-214ENST00000576409 KRT10P13645 584 aa18.98■□□□□ 0.63
ATPAF1-214ENST00000576409 CASP5P51878 434 aa18.98■□□□□ 0.63
ATPAF1-214ENST00000576409 GRIK5Q16478 980 aa18.98■□□□□ 0.63
ATPAF1-214ENST00000576409 CDC42EP5Q6NZY7 148 aa18.98■□□□□ 0.63
ATPAF1-214ENST00000576409 CDKL2Q92772 493 aa18.98■□□□□ 0.63
ATPAF1-214ENST00000576409 PPP1R36Q96LQ0 422 aa18.98■□□□□ 0.63
ATPAF1-214ENST00000576409 SLC4A9Q96Q91 983 aa18.98■□□□□ 0.63
ATPAF1-214ENST00000576409 SEL1LQ9UBV2 794 aa18.98■□□□□ 0.63
ATPAF1-214ENST00000576409 SLC9A2Q9UBY0 812 aa18.98■□□□□ 0.63
ATPAF1-214ENST00000576409 SALL4Q9UJQ4 1053 aa18.98■□□□□ 0.63
ATPAF1-214ENST00000576409 PREX1Q8TCU6 1659 aa18.98■□□□□ 0.63
ATPAF1-214ENST00000576409 PFASO15067 1338 aa18.98■□□□□ 0.63
ATPAF1-214ENST00000576409 E2F8A0AVK6 867 aa18.98■□□□□ 0.63
ATPAF1-214ENST00000576409 FAM47DPA6NHR8 397 aa18.98■□□□□ 0.63
ATPAF1-214ENST00000576409 DDX3XO00571 662 aaKnown RBP eCLIP18.98■□□□□ 0.635e-8■■■■■ 28.2
ATPAF1-214ENST00000576409 ENO1P06733 434 aaKnown RBP18.98■□□□□ 0.63
ATPAF1-214ENST00000576409 SLC27A3Q5K4L6 730 aa18.98■□□□□ 0.63
ATPAF1-214ENST00000576409 NLGN1Q8N2Q7 840 aa18.98■□□□□ 0.63
ATPAF1-214ENST00000576409 TRAIPQ9BWF2 469 aa18.98■□□□□ 0.63
ATPAF1-214ENST00000576409 RFC1P35251 1148 aaPredicted RBP18.98■□□□□ 0.63
ATPAF1-214ENST00000576409 ECE1P42892 770 aa18.98■□□□□ 0.63
ATPAF1-214ENST00000576409 YWHAEP62258 255 aaKnown RBP18.98■□□□□ 0.63
ATPAF1-214ENST00000576409 SNRNP35Q16560 246 aaKnown RBP18.98■□□□□ 0.63
ATPAF1-214ENST00000576409 CRLF3Q8IUI8 442 aa18.98■□□□□ 0.63
ATPAF1-214ENST00000576409 CDC42EP4Q9H3Q1 356 aaKnown RBP18.98■□□□□ 0.63
ATPAF1-214ENST00000576409 PRR12Q9ULL5 1215 aa18.98■□□□□ 0.63
ATPAF1-214ENST00000576409 TACC3Q9Y6A5 838 aa18.98■□□□□ 0.63
ATPAF1-214ENST00000576409 KRT37O76014 449 aa18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 MAGEA4P43358 317 aa18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 ATXN3P54252 364 aaPredicted RBP18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 RPS6KA2Q15349 733 aa18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 DAGLBQ8NCG7 672 aa18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 RNF169Q8NCN4 708 aa18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 DHX38Q92620 1227 aaKnown RBP18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 CNKSR1Q969H4 720 aa18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 IKZF4Q9H2S9 585 aa18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 ZNF408Q9H9D4 720 aa18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 SCINQ9Y6U3 715 aa18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 TULP2O00295 520 aa18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 GPC4O75487 556 aa18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 SEZ6Q53EL9 994 aa18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 C1orf228Q6PIY5 440 aa18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 TMC3Q7Z5M5 1100 aa18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 SLC26A7Q8TE54 656 aa18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 RBM41Q96IZ5 413 aaKnown RBP18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 ANLNQ9NQW6 1124 aa18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 ITSN1Q15811 1721 aa18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 ADAMTS3O15072 1205 aa18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 C21orf2O43822 256 aa18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 HOXA7P31268 230 aaPredicted RBP18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 HIF1AQ16665 826 aa18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 RGS9BPQ6ZS82 235 aa18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 FUKQ8N0W3 1084 aa18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 PRCCQ92733 491 aaPredicted RBP18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 VPS11Q9H270 941 aa18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 NRBP2Q9NSY0 501 aa18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 DLGAP2Q9P1A6 1054 aa18.97■□□□□ 0.63
ATPAF1-214ENST00000576409 SHBGP04278 402 aa18.96■□□□□ 0.63
ATPAF1-214ENST00000576409 PGM1P36871 562 aa18.96■□□□□ 0.63
ATPAF1-214ENST00000576409 COPS2P61201 443 aa18.96■□□□□ 0.63
ATPAF1-214ENST00000576409 DBN1Q16643 649 aa18.96■□□□□ 0.63
ATPAF1-214ENST00000576409 RABGAP1LQ5R372 815 aa18.96■□□□□ 0.63
ATPAF1-214ENST00000576409 CBWD2Q8IUF1 395 aa18.96■□□□□ 0.63
ATPAF1-214ENST00000576409 ATP8B4Q8TF62 1192 aa18.96■□□□□ 0.63
ATPAF1-214ENST00000576409 H0YCG3 227 aa18.96■□□□□ 0.63
ATPAF1-214ENST00000576409 P4HA1P13674 534 aa18.96■□□□□ 0.63
ATPAF1-214ENST00000576409 ITIH2P19823 946 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms