RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 UBXN1Q04323 297 aa17.92■□□□□ 0.46
ERCC4-208ENST00000576348 ZBTB41Q5SVQ8 909 aa17.92■□□□□ 0.46
ERCC4-208ENST00000576348 TRAF7Q6Q0C0 670 aa17.92■□□□□ 0.46
ERCC4-208ENST00000576348 BRSK2Q8IWQ3 736 aa17.92■□□□□ 0.46
ERCC4-208ENST00000576348 TMC2Q8TDI7 906 aa17.92■□□□□ 0.46
ERCC4-208ENST00000576348 SEPT8Q92599 483 aa17.92■□□□□ 0.46
ERCC4-208ENST00000576348 PCMTD1Q96MG8 357 aaPredicted RBP17.92■□□□□ 0.46
ERCC4-208ENST00000576348 ACAP3Q96P50 834 aa17.92■□□□□ 0.46
ERCC4-208ENST00000576348 APOL6Q9BWW8 343 aa17.92■□□□□ 0.46
ERCC4-208ENST00000576348 EIF2AQ9BY44 585 aaKnown RBP17.92■□□□□ 0.46
ERCC4-208ENST00000576348 NDST4Q9H3R1 872 aa17.92■□□□□ 0.46
ERCC4-208ENST00000576348 MMRN2Q9H8L6 949 aa17.92■□□□□ 0.46
ERCC4-208ENST00000576348 PRKAG2Q9UGJ0 569 aa17.92■□□□□ 0.46
ERCC4-208ENST00000576348 TBX21Q9UL17 535 aa17.92■□□□□ 0.46
ERCC4-208ENST00000576348 EVPLQ92817 2033 aa17.92■□□□□ 0.46
ERCC4-208ENST00000576348 A0A1B0GTH6 734 aa17.91■□□□□ 0.46
ERCC4-208ENST00000576348 LRRC10BA6NIK2 292 aa17.91■□□□□ 0.46
ERCC4-208ENST00000576348 IL18RAPO95256 599 aa17.91■□□□□ 0.46
ERCC4-208ENST00000576348 TRIM49P0CI25 452 aa17.91■□□□□ 0.46
ERCC4-208ENST00000576348 TRIM49CP0CI26 452 aa17.91■□□□□ 0.46
ERCC4-208ENST00000576348 DLATP10515 647 aaKnown RBP17.91■□□□□ 0.46
ERCC4-208ENST00000576348 GRM5P41594 1212 aa17.91■□□□□ 0.46
ERCC4-208ENST00000576348 PSMD6Q15008 389 aa17.91■□□□□ 0.46
ERCC4-208ENST00000576348 MFSD14AQ96MC6 490 aa17.91■□□□□ 0.46
ERCC4-208ENST00000576348 NAP1L5Q96NT1 182 aaPredicted RBP17.91■□□□□ 0.46
ERCC4-208ENST00000576348 TOPORSQ9NS56 1045 aaPredicted RBP17.91■□□□□ 0.46
ERCC4-208ENST00000576348 PARP2Q9UGN5 583 aa17.91■□□□□ 0.46
ERCC4-208ENST00000576348 CPSF3Q9UKF6 684 aaKnown RBP17.91■□□□□ 0.46
ERCC4-208ENST00000576348 UMODL1Q5DID0 1318 aa17.91■□□□□ 0.46
ERCC4-208ENST00000576348 N4BP1O75113 896 aaKnown RBP17.9■□□□□ 0.46
ERCC4-208ENST00000576348 SKIP12755 728 aa17.9■□□□□ 0.46
ERCC4-208ENST00000576348 RAG1P15918 1043 aa17.9■□□□□ 0.46
ERCC4-208ENST00000576348 TNNI1P19237 187 aa17.9■□□□□ 0.46
ERCC4-208ENST00000576348 TNFSF9P41273 254 aa17.9■□□□□ 0.46
ERCC4-208ENST00000576348 RAB27AP51159 221 aa17.9■□□□□ 0.46
ERCC4-208ENST00000576348 ENPEPQ07075 957 aa17.9■□□□□ 0.46
ERCC4-208ENST00000576348 CETN1Q12798 172 aa17.9■□□□□ 0.46
ERCC4-208ENST00000576348 KCNH2Q12809 1159 aa17.9■□□□□ 0.46
ERCC4-208ENST00000576348 CEP120Q8N960 986 aa17.9■□□□□ 0.46
ERCC4-208ENST00000576348 BORCS6Q96GS4 357 aa17.9■□□□□ 0.46
ERCC4-208ENST00000576348 MRFAP1L1Q96HT8 127 aa17.9■□□□□ 0.46
ERCC4-208ENST00000576348 ABHD8Q96I13 439 aa17.9■□□□□ 0.46
ERCC4-208ENST00000576348 SCLYQ96I15 445 aa17.9■□□□□ 0.46
ERCC4-208ENST00000576348 ADAM2Q99965 735 aa17.9■□□□□ 0.46
ERCC4-208ENST00000576348 FTHL17Q9BXU8 183 aa17.9■□□□□ 0.46
ERCC4-208ENST00000576348 RTN4Q9NQC3 1192 aaKnown RBP17.9■□□□□ 0.46
ERCC4-208ENST00000576348 PCDHB2Q9Y5E7 798 aa17.9■□□□□ 0.46
ERCC4-208ENST00000576348 GOLGA6L6A8MZA4 724 aa17.89■□□□□ 0.45
ERCC4-208ENST00000576348 AP5Z1O43299 807 aa17.89■□□□□ 0.45
ERCC4-208ENST00000576348 CXCL8P10145 99 aa17.89■□□□□ 0.45
ERCC4-208ENST00000576348 RFC2P35250 354 aa17.89■□□□□ 0.45
ERCC4-208ENST00000576348 MYL7Q01449 175 aa17.89■□□□□ 0.45
ERCC4-208ENST00000576348 POU5F1Q01860 360 aaKnown RBP17.89■□□□□ 0.45
ERCC4-208ENST00000576348 MBTPS1Q14703 1052 aa17.89■□□□□ 0.45
ERCC4-208ENST00000576348 UBXN11Q5T124 520 aa17.89■□□□□ 0.45
ERCC4-208ENST00000576348 COL13A1Q5TAT6 717 aaPredicted RBP17.89■□□□□ 0.45
ERCC4-208ENST00000576348 CRELD2Q6UXH1 353 aaPredicted RBP17.89■□□□□ 0.45
ERCC4-208ENST00000576348 FAM43BQ6ZT52 329 aaPredicted RBP17.89■□□□□ 0.45
ERCC4-208ENST00000576348 APTXQ7Z2E3 356 aaKnown RBP17.89■□□□□ 0.45
ERCC4-208ENST00000576348 APBB2Q92870 758 aa17.89■□□□□ 0.45
ERCC4-208ENST00000576348 SLC35C1Q96A29 364 aa17.89■□□□□ 0.45
ERCC4-208ENST00000576348 HTATIP2Q9BUP3 242 aa17.89■□□□□ 0.45
ERCC4-208ENST00000576348 PDE11AQ9HCR9 933 aa17.89■□□□□ 0.45
ERCC4-208ENST00000576348 SNTG2Q9NY99 539 aa17.89■□□□□ 0.45
ERCC4-208ENST00000576348 SIP14410 1827 aa17.88■□□□□ 0.45
ERCC4-208ENST00000576348 TRIP12Q14669 1992 aaPredicted RBP17.88■□□□□ 0.45
ERCC4-208ENST00000576348 CCDC85CA6NKD9 419 aa17.88■□□□□ 0.45
ERCC4-208ENST00000576348 LRRIQ3A6PVS8 624 aaPredicted RBP17.88■□□□□ 0.45
ERCC4-208ENST00000576348 FAM189A1O60320 539 aa17.88■□□□□ 0.45
ERCC4-208ENST00000576348 NBNO60934 754 aa17.88■□□□□ 0.45
ERCC4-208ENST00000576348 CLSTN1O94985 981 aa17.88■□□□□ 0.45
ERCC4-208ENST00000576348 ITGA4P13612 1032 aa17.88■□□□□ 0.45
ERCC4-208ENST00000576348 NR1I3Q14994 352 aa17.88■□□□□ 0.45
ERCC4-208ENST00000576348 ENOX2Q16206 610 aaKnown RBP17.88■□□□□ 0.45
ERCC4-208ENST00000576348 MIIPQ5JXC2 388 aa17.88■□□□□ 0.45
ERCC4-208ENST00000576348 DEFB128Q7Z7B8 93 aa17.88■□□□□ 0.45
ERCC4-208ENST00000576348 UBE2Q1Q7Z7E8 422 aa17.88■□□□□ 0.45
ERCC4-208ENST00000576348 CD302Q8IX05 232 aa17.88■□□□□ 0.45
ERCC4-208ENST00000576348 RNF169Q8NCN4 708 aa17.88■□□□□ 0.45
ERCC4-208ENST00000576348 PARD3BQ8TEW8 1205 aa17.88■□□□□ 0.45
ERCC4-208ENST00000576348 PGBD4Q96DM1 585 aa17.88■□□□□ 0.45
ERCC4-208ENST00000576348 CGRRF1Q99675 332 aa17.88■□□□□ 0.45
ERCC4-208ENST00000576348 OSBPL7Q9BZF2 842 aa17.88■□□□□ 0.45
ERCC4-208ENST00000576348 WNT8AQ9H1J5 351 aa17.88■□□□□ 0.45
ERCC4-208ENST00000576348 TMX1Q9H3N1 280 aa17.88■□□□□ 0.45
ERCC4-208ENST00000576348 NXF3Q9H4D5 531 aaKnown RBP17.88■□□□□ 0.45
ERCC4-208ENST00000576348 FAM105AQ9NUU6 356 aa17.88■□□□□ 0.45
ERCC4-208ENST00000576348 IPPQ9Y573 584 aa17.88■□□□□ 0.45
ERCC4-208ENST00000576348 KIAA0355O15063 1070 aa17.87■□□□□ 0.45
ERCC4-208ENST00000576348 TEX33O43247 280 aa17.87■□□□□ 0.45
ERCC4-208ENST00000576348 PHACTR2O75167 634 aa17.87■□□□□ 0.45
ERCC4-208ENST00000576348 RECQL4O94761 1208 aa17.87■□□□□ 0.45
ERCC4-208ENST00000576348 TIMP1P01033 207 aa17.87■□□□□ 0.45
ERCC4-208ENST00000576348 TNNC2P02585 160 aa17.87■□□□□ 0.45
ERCC4-208ENST00000576348 TMEM191BP0C7N4 346 aa17.87■□□□□ 0.45
ERCC4-208ENST00000576348 GTF2H1P32780 548 aa17.87■□□□□ 0.45
ERCC4-208ENST00000576348 GCLMP48507 274 aa17.87■□□□□ 0.45
ERCC4-208ENST00000576348 FMO5P49326 533 aa17.87■□□□□ 0.45
ERCC4-208ENST00000576348 MXI1P50539 228 aa17.87■□□□□ 0.45
ERCC4-208ENST00000576348 AP3M2P53677 418 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms