RNA–Protein interactions for RNA: ENST00000576036.5

LITAF-218, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LITAF, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-218ENST00000576036 MLH1P40692 756 aa17.11■□□□□ 0.33
LITAF-218ENST00000576036 PRCPP42785 496 aa17.11■□□□□ 0.33
LITAF-218ENST00000576036 OSTNP61366 133 aa17.11■□□□□ 0.33
LITAF-218ENST00000576036 ZCWPW2Q504Y3 356 aa17.11■□□□□ 0.33
LITAF-218ENST00000576036 COBLL1Q53SF7 1204 aa17.11■□□□□ 0.33
LITAF-218ENST00000576036 RBM43Q6ZSC3 357 aaKnown RBP17.11■□□□□ 0.33
LITAF-218ENST00000576036 STXBP4Q6ZWJ1 553 aa17.11■□□□□ 0.33
LITAF-218ENST00000576036 THNSL1Q8IYQ7 743 aa17.11■□□□□ 0.33
LITAF-218ENST00000576036 CMTR2Q8IYT2 770 aaKnown RBP17.11■□□□□ 0.33
LITAF-218ENST00000576036 GUF1Q8N442 669 aaKnown RBP17.11■□□□□ 0.33
LITAF-218ENST00000576036 PGBD4Q96DM1 585 aa17.11■□□□□ 0.33
LITAF-218ENST00000576036 TCHPQ9BT92 498 aa17.11■□□□□ 0.33
LITAF-218ENST00000576036 ZBED2Q9BTP6 218 aa17.11■□□□□ 0.33
LITAF-218ENST00000576036 GBP3Q9H0R5 595 aa17.11■□□□□ 0.33
LITAF-218ENST00000576036 CWH43Q9H720 699 aa17.11■□□□□ 0.33
LITAF-218ENST00000576036 RMND1Q9NWS8 449 aa17.11■□□□□ 0.33
LITAF-218ENST00000576036 TMEM63CQ9P1W3 806 aa17.11■□□□□ 0.33
LITAF-218ENST00000576036 ARL5CA6NH57 179 aa17.1■□□□□ 0.33
LITAF-218ENST00000576036 PTGESO14684 152 aa17.1■□□□□ 0.33
LITAF-218ENST00000576036 GARTP22102 1010 aa17.1■□□□□ 0.33
LITAF-218ENST00000576036 WNT7BP56706 349 aa17.1■□□□□ 0.33
LITAF-218ENST00000576036 TAP1Q03518 808 aa17.1■□□□□ 0.33
LITAF-218ENST00000576036 RAB30Q15771 203 aa17.1■□□□□ 0.33
LITAF-218ENST00000576036 SLC10A6Q3KNW5 377 aa17.1■□□□□ 0.33
LITAF-218ENST00000576036 XKR4Q5GH76 650 aa17.1■□□□□ 0.33
LITAF-218ENST00000576036 NOMO2Q5JPE7 1267 aa17.1■□□□□ 0.33
LITAF-218ENST00000576036 ALKAL1Q6UXT8 129 aa17.1■□□□□ 0.33
LITAF-218ENST00000576036 SYCP3Q8IZU3 236 aa17.1■□□□□ 0.33
LITAF-218ENST00000576036 CCDC47Q96A33 483 aaKnown RBP17.1■□□□□ 0.33
LITAF-218ENST00000576036 SAAL1Q96ER3 474 aa17.1■□□□□ 0.33
LITAF-218ENST00000576036 SNX27Q96L92 541 aa17.1■□□□□ 0.33
LITAF-218ENST00000576036 MSTO1Q9BUK6 570 aa17.1■□□□□ 0.33
LITAF-218ENST00000576036 SEMA6BQ9H3T3 888 aa17.1■□□□□ 0.33
LITAF-218ENST00000576036 TBC1D13Q9NVG8 400 aa17.1■□□□□ 0.33
LITAF-218ENST00000576036 PARP2Q9UGN5 583 aa17.1■□□□□ 0.33
LITAF-218ENST00000576036 CPSF3Q9UKF6 684 aaKnown RBP17.1■□□□□ 0.33
LITAF-218ENST00000576036 INPP5FQ9Y2H2 1132 aa17.1■□□□□ 0.33
LITAF-218ENST00000576036 GIT1Q9Y2X7 761 aa17.1■□□□□ 0.33
LITAF-218ENST00000576036 PPP1R3GB7ZBB8 358 aa17.09■□□□□ 0.33
LITAF-218ENST00000576036 HOXA2O43364 376 aa17.09■□□□□ 0.33
LITAF-218ENST00000576036 ADRB2P07550 413 aa17.09■□□□□ 0.33
LITAF-218ENST00000576036 CXCL8P10145 99 aa17.09■□□□□ 0.33
LITAF-218ENST00000576036 SCNN1GP51170 649 aa17.09■□□□□ 0.33
LITAF-218ENST00000576036 PMS1P54277 932 aaKnown RBP17.09■□□□□ 0.33
LITAF-218ENST00000576036 NAB2Q15742 525 aa17.09■□□□□ 0.33
LITAF-218ENST00000576036 ENOX2Q16206 610 aaKnown RBP17.09■□□□□ 0.33
LITAF-218ENST00000576036 SLFN12LQ6IEE8 588 aa17.09■□□□□ 0.33
LITAF-218ENST00000576036 GLB1LQ6UWU2 654 aa17.09■□□□□ 0.33
LITAF-218ENST00000576036 C12orf56Q8IXR9 622 aa17.09■□□□□ 0.33
LITAF-218ENST00000576036 ADSSL1Q8N142 457 aa17.09■□□□□ 0.33
LITAF-218ENST00000576036 TMEM130Q8N3G9 435 aa17.09■□□□□ 0.33
LITAF-218ENST00000576036 POMGNT1Q8WZA1 660 aa17.09■□□□□ 0.33
LITAF-218ENST00000576036 CLP1Q92989 425 aaKnown RBP17.09■□□□□ 0.33
LITAF-218ENST00000576036 TIFAQ96CG3 184 aa17.09■□□□□ 0.33
LITAF-218ENST00000576036 ZMAT2Q96NC0 199 aaKnown RBP17.09■□□□□ 0.33
LITAF-218ENST00000576036 TTYH1Q9H313 450 aaPredicted RBP17.09■□□□□ 0.33
LITAF-218ENST00000576036 PCIF1Q9H4Z3 704 aa17.09■□□□□ 0.33
LITAF-218ENST00000576036 DMAC2Q9NW81 257 aa17.09■□□□□ 0.33
LITAF-218ENST00000576036 RNF216Q9NWF9 866 aaPredicted RBP17.09■□□□□ 0.33
LITAF-218ENST00000576036 AGO2Q9UKV8 859 aaKnown RBP17.09■□□□□ 0.33
LITAF-218ENST00000576036 TTC26A0AVF1 554 aa17.08■□□□□ 0.32
LITAF-218ENST00000576036 GOLGA8IPA6NC78 632 aa17.08■□□□□ 0.32
LITAF-218ENST00000576036 GOLGA8JA6NMD2 632 aa17.08■□□□□ 0.32
LITAF-218ENST00000576036 CLIC2O15247 247 aa17.08■□□□□ 0.32
LITAF-218ENST00000576036 DDHD2O94830 711 aa17.08■□□□□ 0.32
LITAF-218ENST00000576036 ACOT2P49753 483 aa17.08■□□□□ 0.32
LITAF-218ENST00000576036 BTG3Q14201 252 aaPredicted RBP17.08■□□□□ 0.32
LITAF-218ENST00000576036 ARMCX5Q6P1M9 558 aa17.08■□□□□ 0.32
LITAF-218ENST00000576036 APBB1IPQ7Z5R6 666 aaPredicted RBP17.08■□□□□ 0.32
LITAF-218ENST00000576036 ZNF280BQ86YH2 543 aa17.08■□□□□ 0.32
LITAF-218ENST00000576036 FBXL18Q96ME1 805 aa17.08■□□□□ 0.32
LITAF-218ENST00000576036 CCDC94Q9BW85 323 aaPredicted RBP17.08■□□□□ 0.32
LITAF-218ENST00000576036 UBN1Q9NPG3 1134 aa17.08■□□□□ 0.32
LITAF-218ENST00000576036 TYW1Q9NV66 732 aaKnown RBP17.08■□□□□ 0.32
LITAF-218ENST00000576036 MSRAQ9UJ68 235 aa17.08■□□□□ 0.32
LITAF-218ENST00000576036 CHD7Q9P2D1 2997 aa17.08■□□□□ 0.32
LITAF-218ENST00000576036 SCN1AP35498 2009 aa17.08■□□□□ 0.32
LITAF-218ENST00000576036 EPOPA6NHQ4 379 aa17.07■□□□□ 0.32
LITAF-218ENST00000576036 PDXKO00764 312 aa17.07■□□□□ 0.32
LITAF-218ENST00000576036 POMCP01189 267 aa17.07■□□□□ 0.32
LITAF-218ENST00000576036 CLTAP09496 248 aa17.07■□□□□ 0.32
LITAF-218ENST00000576036 MATR3P43243 847 aaKnown RBP eCLIP17.07■□□□□ 0.32
LITAF-218ENST00000576036 FXR1P51114 621 aaKnown RBP eCLIP17.07■□□□□ 0.32
LITAF-218ENST00000576036 DSC1Q08554 894 aa17.07■□□□□ 0.32
LITAF-218ENST00000576036 HACE1Q8IYU2 909 aa17.07■□□□□ 0.32
LITAF-218ENST00000576036 LRRC43Q8N309 656 aa17.07■□□□□ 0.32
LITAF-218ENST00000576036 TRIML1Q8N9V2 468 aa17.07■□□□□ 0.32
LITAF-218ENST00000576036 TMEM174Q8WUU8 243 aa17.07■□□□□ 0.32
LITAF-218ENST00000576036 ACAP3Q96P50 834 aa17.07■□□□□ 0.32
LITAF-218ENST00000576036 PPP1R10Q96QC0 940 aaKnown RBP17.07■□□□□ 0.32
LITAF-218ENST00000576036 MED15Q96RN5 788 aa17.07■□□□□ 0.32
LITAF-218ENST00000576036 C17orf80Q9BSJ5 609 aa17.07■□□□□ 0.32
LITAF-218ENST00000576036 NRDE2Q9H7Z3 1164 aa17.07■□□□□ 0.32
LITAF-218ENST00000576036 HSPBP1Q9NZL4 362 aa17.07■□□□□ 0.32
LITAF-218ENST00000576036 CNTN3Q9P232 1028 aa17.07■□□□□ 0.32
LITAF-218ENST00000576036 CACNG4Q9UBN1 327 aa17.07■□□□□ 0.32
LITAF-218ENST00000576036 DNAJB4Q9UDY4 337 aa17.07■□□□□ 0.32
LITAF-218ENST00000576036 TRAF3IP3Q9Y228 551 aa17.07■□□□□ 0.32
LITAF-218ENST00000576036 VWA8A3KMH1 1905 aa17.07■□□□□ 0.32
LITAF-218ENST00000576036 KCNE1P15382 129 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms