RNA–Protein interactions for RNA: ENST00000575707.5

TRAP1-213, Transcript of TNF receptor associated protein 1, humanhuman

TSL 5

Gene TRAP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-213ENST00000575707 RAB34Q9BZG1 259 aa18.24■□□□□ 0.51
TRAP1-213ENST00000575707 GPR62Q9BZJ7 368 aa18.24■□□□□ 0.51
TRAP1-213ENST00000575707 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.24■□□□□ 0.51
TRAP1-213ENST00000575707 KIAA1024Q9UPX6 916 aa18.24■□□□□ 0.51
TRAP1-213ENST00000575707 PCDHB6Q9Y5E3 794 aa18.24■□□□□ 0.51
TRAP1-213ENST00000575707 MTCL1Q9Y4B5 1905 aaKnown RBP18.23■□□□□ 0.51
TRAP1-213ENST00000575707 EDN1P05305 212 aa18.23■□□□□ 0.51
TRAP1-213ENST00000575707 EFNA5P52803 228 aa18.23■□□□□ 0.51
TRAP1-213ENST00000575707 TUSC3Q13454 348 aa18.23■□□□□ 0.51
TRAP1-213ENST00000575707 HSP90AA2PQ14568 343 aaPredicted RBP18.23■□□□□ 0.51
TRAP1-213ENST00000575707 RABEP1Q15276 862 aa18.23■□□□□ 0.51
TRAP1-213ENST00000575707 TMEM132AQ24JP5 1023 aa18.23■□□□□ 0.51
TRAP1-213ENST00000575707 IER5LQ5T953 404 aa18.23■□□□□ 0.51
TRAP1-213ENST00000575707 OTOP3Q7RTS5 596 aa18.23■□□□□ 0.51
TRAP1-213ENST00000575707 PRSS33Q8NF86 280 aa18.23■□□□□ 0.51
TRAP1-213ENST00000575707 SNX29Q8TEQ0 813 aa18.23■□□□□ 0.51
TRAP1-213ENST00000575707 DDX19AQ9NUU7 478 aaKnown RBP18.23■□□□□ 0.51
TRAP1-213ENST00000575707 SNTG2Q9NY99 539 aa18.23■□□□□ 0.51
TRAP1-213ENST00000575707 FNIP2Q9P278 1114 aa18.23■□□□□ 0.51
TRAP1-213ENST00000575707 LIMD1Q9UGP4 676 aa18.23■□□□□ 0.51
TRAP1-213ENST00000575707 PTGESO14684 152 aa18.22■□□□□ 0.51
TRAP1-213ENST00000575707 TADA2AO75478 443 aa18.22■□□□□ 0.51
TRAP1-213ENST00000575707 RECQL4O94761 1208 aa18.22■□□□□ 0.51
TRAP1-213ENST00000575707 PAPLNO95428 1278 aa18.22■□□□□ 0.51
TRAP1-213ENST00000575707 THP07101 528 aa18.22■□□□□ 0.51
TRAP1-213ENST00000575707 ASGR2P07307 311 aa18.22■□□□□ 0.51
TRAP1-213ENST00000575707 PTPN5P54829 565 aa18.22■□□□□ 0.51
TRAP1-213ENST00000575707 CREMQ03060 361 aa18.22■□□□□ 0.51
TRAP1-213ENST00000575707 DCAF4L1Q3SXM0 396 aa18.22■□□□□ 0.51
TRAP1-213ENST00000575707 ALYREFQ86V81 257 aaKnown RBP18.22■□□□□ 0.51
TRAP1-213ENST00000575707 B3GALT6Q96L58 329 aa18.22■□□□□ 0.51
TRAP1-213ENST00000575707 KIFC3Q9BVG8 833 aa18.22■□□□□ 0.51
TRAP1-213ENST00000575707 PLEKHA4Q9H4M7 779 aa18.22■□□□□ 0.51
TRAP1-213ENST00000575707 KIF3AQ9Y496 699 aa18.22■□□□□ 0.51
TRAP1-213ENST00000575707 SF3B1O75533 1304 aaKnown RBP eCLIP18.22■□□□□ 0.51
TRAP1-213ENST00000575707 CCDC195A0A1B0GUA6 201 aa18.21■□□□□ 0.51
TRAP1-213ENST00000575707 AVPR2P30518 371 aa18.21■□□□□ 0.51
TRAP1-213ENST00000575707 PRPHP41219 470 aa18.21■□□□□ 0.51
TRAP1-213ENST00000575707 VCPP55072 806 aaKnown RBP18.21■□□□□ 0.51
TRAP1-213ENST00000575707 NAB2Q15742 525 aa18.21■□□□□ 0.51
TRAP1-213ENST00000575707 RABGGTAQ92696 567 aa18.21■□□□□ 0.51
TRAP1-213ENST00000575707 PAAF1Q9BRP4 392 aa18.21■□□□□ 0.51
TRAP1-213ENST00000575707 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.21■□□□□ 0.51
TRAP1-213ENST00000575707 CACNG4Q9UBN1 327 aa18.21■□□□□ 0.51
TRAP1-213ENST00000575707 USP20Q9Y2K6 914 aa18.21■□□□□ 0.51
TRAP1-213ENST00000575707 TGM5O43548 720 aa18.2■□□□□ 0.5
TRAP1-213ENST00000575707 ST18O60284 1047 aa18.2■□□□□ 0.5
TRAP1-213ENST00000575707 PDGFBP01127 241 aaPredicted RBP18.2■□□□□ 0.5
TRAP1-213ENST00000575707 LIG1P18858 919 aa18.2■□□□□ 0.5
TRAP1-213ENST00000575707 MRE11P49959 708 aa18.2■□□□□ 0.5
TRAP1-213ENST00000575707 NT5DC1Q5TFE4 455 aa18.2■□□□□ 0.5
TRAP1-213ENST00000575707 ATF7IP2Q5U623 682 aa18.2■□□□□ 0.5
TRAP1-213ENST00000575707 KRT79Q5XKE5 535 aa18.2■□□□□ 0.5
TRAP1-213ENST00000575707 EEF1DP3Q658K8 133 aa18.2■□□□□ 0.5
TRAP1-213ENST00000575707 LILRA6Q6PI73 481 aa18.2■□□□□ 0.5
TRAP1-213ENST00000575707 RIN2Q8WYP3 895 aaPredicted RBP18.2■□□□□ 0.5
TRAP1-213ENST00000575707 SMOC2Q9H3U7 446 aa18.2■□□□□ 0.5
TRAP1-213ENST00000575707 POLD4Q9HCU8 107 aa18.2■□□□□ 0.5
TRAP1-213ENST00000575707 WDR6Q9NNW5 1121 aaKnown RBP18.2■□□□□ 0.5
TRAP1-213ENST00000575707 DNM3Q9UQ16 869 aa18.2■□□□□ 0.5
TRAP1-213ENST00000575707 CASTOR2A6NHX0 329 aa18.19■□□□□ 0.5
TRAP1-213ENST00000575707 E9PMD0 336 aa18.19■□□□□ 0.5
TRAP1-213ENST00000575707 RFPL2O75678 378 aa18.19■□□□□ 0.5
TRAP1-213ENST00000575707 KIF4AO95239 1232 aa18.19■□□□□ 0.5
TRAP1-213ENST00000575707 NUBP1P53384 320 aa18.19■□□□□ 0.5
TRAP1-213ENST00000575707 TCF15Q12870 199 aa18.19■□□□□ 0.5
TRAP1-213ENST00000575707 IL17AQ16552 155 aa18.19■□□□□ 0.5
TRAP1-213ENST00000575707 RILPL1Q5EBL4 403 aa18.19■□□□□ 0.5
TRAP1-213ENST00000575707 DTHD1Q6ZMT9 781 aa18.19■□□□□ 0.5
TRAP1-213ENST00000575707 APBB1IPQ7Z5R6 666 aaPredicted RBP18.19■□□□□ 0.5
TRAP1-213ENST00000575707 PALB2Q86YC2 1186 aa18.19■□□□□ 0.5
TRAP1-213ENST00000575707 STAMQ92783 540 aa18.19■□□□□ 0.5
TRAP1-213ENST00000575707 TTPALQ9BTX7 342 aa18.19■□□□□ 0.5
TRAP1-213ENST00000575707 CXCL16Q9H2A7 254 aa18.19■□□□□ 0.5
TRAP1-213ENST00000575707 TNFSF13BQ9Y275 285 aa18.19■□□□□ 0.5
TRAP1-213ENST00000575707 GDAQ9Y2T3 454 aa18.19■□□□□ 0.5
TRAP1-213ENST00000575707 CLUHO75153 1309 aa18.19■□□□□ 0.5
TRAP1-213ENST00000575707 PHLPP2Q6ZVD8 1323 aa18.19■□□□□ 0.5
TRAP1-213ENST00000575707 TRIP11Q15643 1979 aa18.19■□□□□ 0.5
TRAP1-213ENST00000575707 PP2D1A8MPX8 630 aa18.18■□□□□ 0.5
TRAP1-213ENST00000575707 K7ERI5 159 aa18.18■□□□□ 0.5
TRAP1-213ENST00000575707 SPATA31D3P0C874 917 aa18.18■□□□□ 0.5
TRAP1-213ENST00000575707 RPL17P18621 184 aaKnown RBP18.18■□□□□ 0.5
TRAP1-213ENST00000575707 NPTX2P47972 431 aa18.18■□□□□ 0.5
TRAP1-213ENST00000575707 ELAVL2Q12926 359 aaKnown RBP18.18■□□□□ 0.5
TRAP1-213ENST00000575707 RTP2Q5QGT7 225 aa18.18■□□□□ 0.5
TRAP1-213ENST00000575707 SPATA31D4Q6ZUB0 917 aa18.18■□□□□ 0.5
TRAP1-213ENST00000575707 HASPINQ8TF76 798 aa18.18■□□□□ 0.5
TRAP1-213ENST00000575707 PIK3R5Q8WYR1 880 aa18.18■□□□□ 0.5
TRAP1-213ENST00000575707 SMG7Q92540 1137 aaKnown RBP18.18■□□□□ 0.5
TRAP1-213ENST00000575707 ZNF707Q96C28 371 aaPredicted RBP18.18■□□□□ 0.5
TRAP1-213ENST00000575707 DRC1Q96MC2 740 aa18.18■□□□□ 0.5
TRAP1-213ENST00000575707 MMTAG2Q9BU76 263 aaKnown RBP18.18■□□□□ 0.5
TRAP1-213ENST00000575707 NT5C3AQ9H0P0 336 aa18.18■□□□□ 0.5
TRAP1-213ENST00000575707 ZDHHC7Q9NXF8 308 aa18.18■□□□□ 0.5
TRAP1-213ENST00000575707 VWA8A3KMH1 1905 aa18.17■□□□□ 0.5
TRAP1-213ENST00000575707 CACNA1HO95180 2353 aa18.17■□□□□ 0.5
TRAP1-213ENST00000575707 CCDC169A6NNP5 214 aa18.17■□□□□ 0.5
TRAP1-213ENST00000575707 N4BP1O75113 896 aaKnown RBP18.17■□□□□ 0.5
TRAP1-213ENST00000575707 HIP1RO75146 1068 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms