RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 TCHPQ9BT92 498 aa14.54□□□□□ -0.08
RPAIN-216ENST00000575599 CDT1Q9H211 546 aa14.54□□□□□ -0.08
RPAIN-216ENST00000575599 UBE2ZQ9H832 354 aaPredicted RBP14.54□□□□□ -0.08
RPAIN-216ENST00000575599 PCDHA7Q9UN72 937 aa14.54□□□□□ -0.08
RPAIN-216ENST00000575599 LZTS1Q9Y250 596 aa14.54□□□□□ -0.08
RPAIN-216ENST00000575599 XIRP2A4UGR9 3374 aa14.54□□□□□ -0.08
RPAIN-216ENST00000575599 MYMKA6NI61 221 aa14.53□□□□□ -0.08
RPAIN-216ENST00000575599 MAP3K13O43283 966 aa14.53□□□□□ -0.08
RPAIN-216ENST00000575599 KCNA5P22460 613 aa14.53□□□□□ -0.08
RPAIN-216ENST00000575599 MATR3P43243 847 aaKnown RBP eCLIP14.53□□□□□ -0.08
RPAIN-216ENST00000575599 OR1G1P47890 313 aa14.53□□□□□ -0.08
RPAIN-216ENST00000575599 OSTNP61366 133 aa14.53□□□□□ -0.08
RPAIN-216ENST00000575599 MRPS5P82675 430 aaKnown RBP14.53□□□□□ -0.08
RPAIN-216ENST00000575599 HYAL1Q12794 435 aa14.53□□□□□ -0.08
RPAIN-216ENST00000575599 GRIK3Q13003 919 aa14.53□□□□□ -0.08
RPAIN-216ENST00000575599 MPZL3Q6UWV2 235 aa14.53□□□□□ -0.08
RPAIN-216ENST00000575599 RBM23Q86U06 439 aaKnown RBP14.53□□□□□ -0.08
RPAIN-216ENST00000575599 SFR1Q86XK3 245 aa14.53□□□□□ -0.08
RPAIN-216ENST00000575599 FAM178BQ8IXR5 827 aa14.53□□□□□ -0.08
RPAIN-216ENST00000575599 COLGALT2Q8IYK4 626 aa14.53□□□□□ -0.08
RPAIN-216ENST00000575599 CEP120Q8N960 986 aa14.53□□□□□ -0.08
RPAIN-216ENST00000575599 GSTCDQ8NEC7 633 aa14.53□□□□□ -0.08
RPAIN-216ENST00000575599 BCL7CQ8WUZ0 217 aaPredicted RBP14.53□□□□□ -0.08
RPAIN-216ENST00000575599 STAMQ92783 540 aa14.53□□□□□ -0.08
RPAIN-216ENST00000575599 DHX58Q96C10 678 aa14.53□□□□□ -0.08
RPAIN-216ENST00000575599 IGSF21Q96ID5 467 aa14.53□□□□□ -0.08
RPAIN-216ENST00000575599 TMEM175Q9BSA9 504 aa14.53□□□□□ -0.08
RPAIN-216ENST00000575599 CLDND1Q9NY35 253 aa14.53□□□□□ -0.08
RPAIN-216ENST00000575599 FAN1Q9Y2M0 1017 aa14.53□□□□□ -0.08
RPAIN-216ENST00000575599 PRG3Q9Y2Y8 225 aaPredicted RBP14.53□□□□□ -0.08
RPAIN-216ENST00000575599 ZMYM2Q9UBW7 1377 aa14.52□□□□□ -0.08
RPAIN-216ENST00000575599 CARNS1A5YM72 827 aa14.52□□□□□ -0.08
RPAIN-216ENST00000575599 NRP1O14786 923 aa14.52□□□□□ -0.08
RPAIN-216ENST00000575599 FSCN2O14926 492 aa14.52□□□□□ -0.08
RPAIN-216ENST00000575599 ALDH2P05091 517 aa14.52□□□□□ -0.08
RPAIN-216ENST00000575599 IDEP14735 1019 aa14.52□□□□□ -0.08
RPAIN-216ENST00000575599 NMT1P30419 496 aaKnown RBP14.52□□□□□ -0.08
RPAIN-216ENST00000575599 NRIP1P48552 1158 aa14.52□□□□□ -0.08
RPAIN-216ENST00000575599 KCNQ1P51787 676 aa14.52□□□□□ -0.08
RPAIN-216ENST00000575599 DSC1Q08554 894 aa14.52□□□□□ -0.08
RPAIN-216ENST00000575599 AAK1Q2M2I8 961 aa14.52□□□□□ -0.08
RPAIN-216ENST00000575599 TMC7Q7Z402 723 aa14.52□□□□□ -0.08
RPAIN-216ENST00000575599 VPS52Q8N1B4 723 aa14.52□□□□□ -0.08
RPAIN-216ENST00000575599 PABPC5Q96DU9 382 aaKnown RBP14.52□□□□□ -0.08
RPAIN-216ENST00000575599 ZBTB45Q96K62 511 aaPredicted RBP14.52□□□□□ -0.08
RPAIN-216ENST00000575599 SPATA32Q96LK8 384 aa14.52□□□□□ -0.08
RPAIN-216ENST00000575599 ASB2Q96Q27 587 aa14.52□□□□□ -0.08
RPAIN-216ENST00000575599 CCDC94Q9BW85 323 aaPredicted RBP14.52□□□□□ -0.08
RPAIN-216ENST00000575599 CXCL16Q9H2A7 254 aa14.52□□□□□ -0.08
RPAIN-216ENST00000575599 PTPRHQ9HD43 1115 aa14.52□□□□□ -0.08
RPAIN-216ENST00000575599 FAM13BQ9NYF5 915 aa14.52□□□□□ -0.08
RPAIN-216ENST00000575599 RCOR1Q9UKL0 485 aa14.52□□□□□ -0.08
RPAIN-216ENST00000575599 TBX20Q9UMR3 447 aa14.52□□□□□ -0.08
RPAIN-216ENST00000575599 ABLIM1O14639 778 aa14.51□□□□□ -0.09
RPAIN-216ENST00000575599 HNRNPDLO14979 420 aaKnown RBP14.51□□□□□ -0.09
RPAIN-216ENST00000575599 PER2O15055 1255 aa14.51□□□□□ -0.09
RPAIN-216ENST00000575599 NR1I2O75469 434 aa14.51□□□□□ -0.09
RPAIN-216ENST00000575599 TOM1L1O75674 476 aa14.51□□□□□ -0.09
RPAIN-216ENST00000575599 MCF2P10911 925 aa14.51□□□□□ -0.09
RPAIN-216ENST00000575599 PROZP22891 400 aa14.51□□□□□ -0.09
RPAIN-216ENST00000575599 GRM5P41594 1212 aa14.51□□□□□ -0.09
RPAIN-216ENST00000575599 LIG4P49917 911 aa14.51□□□□□ -0.09
RPAIN-216ENST00000575599 YARSP54577 528 aaKnown RBP14.51□□□□□ -0.09
RPAIN-216ENST00000575599 NOLC1Q14978 699 aaKnown RBP eCLIP14.51□□□□□ -0.09
RPAIN-216ENST00000575599 E2F4Q16254 413 aa14.51□□□□□ -0.09
RPAIN-216ENST00000575599 TJAP1Q5JTD0 557 aa14.51□□□□□ -0.09
RPAIN-216ENST00000575599 GLRA4Q5JXX5 417 aa14.51□□□□□ -0.09
RPAIN-216ENST00000575599 PDE12Q6L8Q7 609 aaKnown RBP14.51□□□□□ -0.09
RPAIN-216ENST00000575599 ZPBP2Q6X784 338 aa14.51□□□□□ -0.09
RPAIN-216ENST00000575599 DDX53Q86TM3 631 aaKnown RBP14.51□□□□□ -0.09
RPAIN-216ENST00000575599 LEO1Q8WVC0 666 aaPredicted RBP14.51□□□□□ -0.09
RPAIN-216ENST00000575599 FIZ1Q96SL8 496 aa14.51□□□□□ -0.09
RPAIN-216ENST00000575599 SCAND2PQ9GZW5 306 aaPredicted RBP14.51□□□□□ -0.09
RPAIN-216ENST00000575599 TLE6Q9H808 572 aa14.51□□□□□ -0.09
RPAIN-216ENST00000575599 MARCH5Q9NX47 278 aa14.51□□□□□ -0.09
RPAIN-216ENST00000575599 TBC1D7Q9P0N9 293 aa14.51□□□□□ -0.09
RPAIN-216ENST00000575599 CACNG4Q9UBN1 327 aa14.51□□□□□ -0.09
RPAIN-216ENST00000575599 CASTOR2A6NHX0 329 aa14.5□□□□□ -0.09
RPAIN-216ENST00000575599 HIDE1A8MVS5 230 aa14.5□□□□□ -0.09
RPAIN-216ENST00000575599 F8W810 466 aa14.5□□□□□ -0.09
RPAIN-216ENST00000575599 H3BQ06 376 aaPredicted RBP14.5□□□□□ -0.09
RPAIN-216ENST00000575599 PTGESO14684 152 aa14.5□□□□□ -0.09
RPAIN-216ENST00000575599 POLR2DO15514 142 aaKnown RBP14.5□□□□□ -0.09
RPAIN-216ENST00000575599 LINC01565O15544 149 aa14.5□□□□□ -0.09
RPAIN-216ENST00000575599 CLDN3O15551 220 aa14.5□□□□□ -0.09
RPAIN-216ENST00000575599 NCK2O43639 380 aa14.5□□□□□ -0.09
RPAIN-216ENST00000575599 THP07101 528 aa14.5□□□□□ -0.09
RPAIN-216ENST00000575599 GAP43P17677 238 aa14.5□□□□□ -0.09
RPAIN-216ENST00000575599 PTMSP20962 102 aa14.5□□□□□ -0.09
RPAIN-216ENST00000575599 SMC1AQ14683 1233 aaKnown RBP14.5□□□□□ -0.09
RPAIN-216ENST00000575599 BMS1Q14692 1282 aaKnown RBP14.5□□□□□ -0.09
RPAIN-216ENST00000575599 TPRNQ4KMQ1 711 aa14.5□□□□□ -0.09
RPAIN-216ENST00000575599 SEZ6Q53EL9 994 aa14.5□□□□□ -0.09
RPAIN-216ENST00000575599 ZC2HC1CQ53FD0 456 aaPredicted RBP14.5□□□□□ -0.09
RPAIN-216ENST00000575599 RESP18Q5W5W9 173 aa14.5□□□□□ -0.09
RPAIN-216ENST00000575599 IQUBQ8NA54 791 aa14.5□□□□□ -0.09
RPAIN-216ENST00000575599 AUTS2Q8WXX7 1259 aa14.5□□□□□ -0.09
RPAIN-216ENST00000575599 RABGGTAQ92696 567 aa14.5□□□□□ -0.09
RPAIN-216ENST00000575599 DNAJC19Q96DA6 116 aa14.5□□□□□ -0.09
RPAIN-216ENST00000575599 VN1R3Q9BXE9 311 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms