RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 CCDC105Q8IYK2 499 aa11.56□□□□□ -0.56
TVP23B-208ENST00000575261 RIN2Q8WYP3 895 aaPredicted RBP11.56□□□□□ -0.56
TVP23B-208ENST00000575261 NXPE3Q969Y0 559 aa11.56□□□□□ -0.56
TVP23B-208ENST00000575261 ZNF707Q96C28 371 aaPredicted RBP11.56□□□□□ -0.56
TVP23B-208ENST00000575261 MYADMQ96S97 322 aa11.56□□□□□ -0.56
TVP23B-208ENST00000575261 C2orf40Q9H1Z8 148 aa11.56□□□□□ -0.56
TVP23B-208ENST00000575261 TUFT1Q9NNX1 390 aa11.56□□□□□ -0.56
TVP23B-208ENST00000575261 GPRC5CQ9NQ84 441 aa11.56□□□□□ -0.56
TVP23B-208ENST00000575261 DMXL1Q9Y485 3027 aa11.56□□□□□ -0.56
TVP23B-208ENST00000575261 ZNF292O60281 2723 aa11.56□□□□□ -0.56
TVP23B-208ENST00000575261 PTPRZ1P23471 2315 aaPredicted RBP11.55□□□□□ -0.56
TVP23B-208ENST00000575261 GVINP1Q7Z2Y8 2422 aa11.55□□□□□ -0.56
TVP23B-208ENST00000575261 N4BP3O15049 544 aa11.55□□□□□ -0.56
TVP23B-208ENST00000575261 NEFLP07196 543 aa11.55□□□□□ -0.56
TVP23B-208ENST00000575261 CFHP08603 1231 aa11.55□□□□□ -0.56
TVP23B-208ENST00000575261 SPATA31D3P0C874 917 aa11.55□□□□□ -0.56
TVP23B-208ENST00000575261 SPATA31C1P0DKV0 1188 aa11.55□□□□□ -0.56
TVP23B-208ENST00000575261 SRFP11831 508 aa11.55□□□□□ -0.56
TVP23B-208ENST00000575261 NPR3P17342 541 aa11.55□□□□□ -0.56
TVP23B-208ENST00000575261 ATP2B1P20020 1258 aa11.55□□□□□ -0.56
TVP23B-208ENST00000575261 RFX1P22670 979 aa11.55□□□□□ -0.56
TVP23B-208ENST00000575261 MCM7P33993 719 aa11.55□□□□□ -0.56
TVP23B-208ENST00000575261 SAFBQ15424 915 aaKnown RBP eCLIP11.55□□□□□ -0.56
TVP23B-208ENST00000575261 FAM187BQ17R55 369 aa11.55□□□□□ -0.56
TVP23B-208ENST00000575261 TMEM132AQ24JP5 1023 aa11.55□□□□□ -0.56
TVP23B-208ENST00000575261 SPATA31D4Q6ZUB0 917 aa11.55□□□□□ -0.56
TVP23B-208ENST00000575261 GLYCTKQ8IVS8 523 aa11.55□□□□□ -0.56
TVP23B-208ENST00000575261 ERMNQ8TAM6 284 aa11.55□□□□□ -0.56
TVP23B-208ENST00000575261 NKD2Q969F2 451 aaPredicted RBP11.55□□□□□ -0.56
TVP23B-208ENST00000575261 ADPGKQ9BRR6 497 aa11.55□□□□□ -0.56
TVP23B-208ENST00000575261 PRKD2Q9BZL6 878 aa11.55□□□□□ -0.56
TVP23B-208ENST00000575261 NT5C3AQ9H0P0 336 aa11.55□□□□□ -0.56
TVP23B-208ENST00000575261 TMEM60Q9H2L4 133 aa11.55□□□□□ -0.56
TVP23B-208ENST00000575261 FZD8Q9H461 694 aa11.55□□□□□ -0.56
TVP23B-208ENST00000575261 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.55□□□□□ -0.56
TVP23B-208ENST00000575261 CACNG4Q9UBN1 327 aa11.55□□□□□ -0.56
TVP23B-208ENST00000575261 WNT16Q9UBV4 365 aa11.55□□□□□ -0.56
TVP23B-208ENST00000575261 CASTOR2A6NHX0 329 aa11.54□□□□□ -0.56
TVP23B-208ENST00000575261 PI15O43692 258 aa11.54□□□□□ -0.56
TVP23B-208ENST00000575261 MED24O75448 989 aa11.54□□□□□ -0.56
TVP23B-208ENST00000575261 ZMYND10O75800 440 aa11.54□□□□□ -0.56
TVP23B-208ENST00000575261 RECQL4O94761 1208 aa11.54□□□□□ -0.56
TVP23B-208ENST00000575261 KIF4AO95239 1232 aa11.54□□□□□ -0.56
TVP23B-208ENST00000575261 RPL17P18621 184 aaKnown RBP11.54□□□□□ -0.56
TVP23B-208ENST00000575261 ORC2Q13416 577 aaPredicted RBP11.54□□□□□ -0.56
TVP23B-208ENST00000575261 PRPF4BQ13523 1007 aaKnown RBP11.54□□□□□ -0.56
TVP23B-208ENST00000575261 ANGPT1Q15389 498 aa11.54□□□□□ -0.56
TVP23B-208ENST00000575261 MAPK6Q16659 721 aa11.54□□□□□ -0.56
TVP23B-208ENST00000575261 RTP2Q5QGT7 225 aa11.54□□□□□ -0.56
TVP23B-208ENST00000575261 LIN9Q5TKA1 542 aa11.54□□□□□ -0.56
TVP23B-208ENST00000575261 LILRA6Q6PI73 481 aa11.54□□□□□ -0.56
TVP23B-208ENST00000575261 POTEGQ6S5H5 508 aa11.54□□□□□ -0.56
TVP23B-208ENST00000575261 FRMD5Q7Z6J6 570 aa11.54□□□□□ -0.56
TVP23B-208ENST00000575261 CATSPER3Q86XQ3 398 aa11.54□□□□□ -0.56
TVP23B-208ENST00000575261 DTWD2Q8NBA8 298 aa11.54□□□□□ -0.56
TVP23B-208ENST00000575261 HASPINQ8TF76 798 aa11.54□□□□□ -0.56
TVP23B-208ENST00000575261 RSAD2Q8WXG1 361 aa11.54□□□□□ -0.56
TVP23B-208ENST00000575261 RABGGTAQ92696 567 aa11.54□□□□□ -0.56
TVP23B-208ENST00000575261 NACC1Q96RE7 527 aa11.54□□□□□ -0.56
TVP23B-208ENST00000575261 PAAF1Q9BRP4 392 aa11.54□□□□□ -0.56
TVP23B-208ENST00000575261 TTPALQ9BTX7 342 aa11.54□□□□□ -0.56
TVP23B-208ENST00000575261 POLR3CQ9BUI4 534 aaPredicted RBP11.54□□□□□ -0.56
TVP23B-208ENST00000575261 PDZD7Q9H5P4 517 aa11.54□□□□□ -0.56
TVP23B-208ENST00000575261 FBXW11Q9UKB1 542 aa11.54□□□□□ -0.56
TVP23B-208ENST00000575261 A0A087WWV3 80 aa11.53□□□□□ -0.56
TVP23B-208ENST00000575261 KRBA1A5PL33 1030 aa11.53□□□□□ -0.56
TVP23B-208ENST00000575261 ARHGEF35A5YM69 484 aa11.53□□□□□ -0.56
TVP23B-208ENST00000575261 STK25O00506 426 aa11.53□□□□□ -0.56
TVP23B-208ENST00000575261 PTGESO14684 152 aa11.53□□□□□ -0.56
TVP23B-208ENST00000575261 EIF5BO60841 1220 aaKnown RBP11.53□□□□□ -0.56
TVP23B-208ENST00000575261 PRKCBP05771 671 aa11.53□□□□□ -0.56
TVP23B-208ENST00000575261 THP07101 528 aa11.53□□□□□ -0.56
TVP23B-208ENST00000575261 OR52Z1P0C646 297 aa11.53□□□□□ -0.56
TVP23B-208ENST00000575261 LAMP2P13473 410 aa11.53□□□□□ -0.56
TVP23B-208ENST00000575261 RPA1P27694 616 aa11.53□□□□□ -0.56
TVP23B-208ENST00000575261 NAMPTP43490 491 aa11.53□□□□□ -0.56
TVP23B-208ENST00000575261 NEK4P51957 841 aa11.53□□□□□ -0.56
TVP23B-208ENST00000575261 ELAVL2Q12926 359 aaKnown RBP11.53□□□□□ -0.56
TVP23B-208ENST00000575261 PPP2R5AQ15172 486 aa11.53□□□□□ -0.56
TVP23B-208ENST00000575261 PSMD5Q16401 504 aa11.53□□□□□ -0.56
TVP23B-208ENST00000575261 FAM171A1Q5VUB5 890 aa11.53□□□□□ -0.56
TVP23B-208ENST00000575261 HAUS3Q68CZ6 603 aa11.53□□□□□ -0.56
TVP23B-208ENST00000575261 PDXDC1Q6P996 788 aa11.53□□□□□ -0.56
TVP23B-208ENST00000575261 PADI6Q6TGC4 694 aa11.53□□□□□ -0.56
TVP23B-208ENST00000575261 PRSS55Q6UWB4 352 aaPredicted RBP11.53□□□□□ -0.56
TVP23B-208ENST00000575261 SLC44A3Q8N4M1 653 aa11.53□□□□□ -0.56
TVP23B-208ENST00000575261 DEPTORQ8TB45 409 aa11.53□□□□□ -0.56
TVP23B-208ENST00000575261 PIK3R5Q8WYR1 880 aa11.53□□□□□ -0.56
TVP23B-208ENST00000575261 SNX27Q96L92 541 aa11.53□□□□□ -0.56
TVP23B-208ENST00000575261 TBC1D17Q9HA65 648 aa11.53□□□□□ -0.56
TVP23B-208ENST00000575261 ARHGEF3Q9NR81 526 aa11.53□□□□□ -0.56
TVP23B-208ENST00000575261 SNTG2Q9NY99 539 aa11.53□□□□□ -0.56
TVP23B-208ENST00000575261 DAXXQ9UER7 740 aaPredicted RBP11.53□□□□□ -0.56
TVP23B-208ENST00000575261 CA14Q9ULX7 337 aa11.53□□□□□ -0.56
TVP23B-208ENST00000575261 ZFP37Q9Y6Q3 630 aaPredicted RBP11.53□□□□□ -0.56
TVP23B-208ENST00000575261 TTLL13PA6NNM8 815 aa11.52□□□□□ -0.57
TVP23B-208ENST00000575261 ANHXE9PGG2 379 aa11.52□□□□□ -0.57
TVP23B-208ENST00000575261 ACKR2O00590 384 aa11.52□□□□□ -0.57
TVP23B-208ENST00000575261 C8AP07357 584 aa11.52□□□□□ -0.57
TVP23B-208ENST00000575261 HNRNPA1P09651 372 aaKnown RBP eCLIP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms