RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 RNF43Q68DV7 783 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 LRSAM1Q6UWE0 723 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 GADL1Q6ZQY3 521 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 TBC1D1Q86TI0 1168 aaPredicted RBP2.45□□□□□ -2.02
CHD3-217ENST00000574022 FAM129CQ86XR2 697 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 SPPL2CQ8IUH8 684 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 FAM26EQ8N5C1 309 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 ESX1Q8N693 406 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 ANKS4BQ8N8V4 417 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 NETO2Q8NC67 525 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 OR10H5Q8NGA6 315 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 NETO1Q8TDF5 533 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 RAB24Q969Q5 203 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 C18orf8Q96DM3 657 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 IQCDQ96DY2 449 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 TOE1Q96GM8 510 aaKnown RBP2.45□□□□□ -2.02
CHD3-217ENST00000574022 HRASLS5Q96KN8 279 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 SAMD11Q96NU1 681 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 DBNDD2Q9BQY9 259 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 AMNQ9BXJ7 453 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 ADAMTS10Q9H324 1103 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 WDCPQ9H6R7 721 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 MANSC1Q9H8J5 431 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 CNTD2Q9H8S5 307 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 RXFP1Q9HBX9 757 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 ALG13Q9NP73 1137 aaKnown RBP2.45□□□□□ -2.02
CHD3-217ENST00000574022 SLC39A2Q9NP94 309 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 INCENPQ9NQS7 918 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 VPS45Q9NRW7 570 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 TM7SF3Q9NS93 570 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 TBC1D22BQ9NU19 505 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 BLOC1S4Q9NUP1 217 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 GALNT8Q9NY28 637 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 KCMF1Q9P0J7 381 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 CALCOCO1Q9P1Z2 691 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 COL20A1Q9P218 1284 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 AFF4Q9UHB7 1163 aaKnown RBP2.45□□□□□ -2.02
CHD3-217ENST00000574022 SLC13A4Q9UKG4 626 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 NUDT5Q9UKK9 219 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 ASAP1Q9ULH1 1129 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 WASF3Q9UPY6 502 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 MAN2B2Q9Y2E5 1009 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 TMEM98Q9Y2Y6 226 aa2.45□□□□□ -2.02
CHD3-217ENST00000574022 CNTNAP5Q8WYK1 1306 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 A6NLC8 198 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 ACKR2O00590 384 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 PODXLO00592 558 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 TRIM38O00635 465 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 LCE2BO14633 110 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 AREL1O15033 823 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 CYP26A1O43174 497 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 ARHGAP6O43182 974 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 TBC1D4O60343 1298 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 PHF2O75151 1096 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 ZBTB7AO95365 584 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 MT-ND5P03915 603 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 POLBP06746 335 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 ANXA2P07355 339 aaKnown RBP2.44□□□□□ -2.02
CHD3-217ENST00000574022 ZGLP1P0C6A0 271 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 FTH1P19P0C7X4 201 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 CKMT1AP12532 417 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 MYL4P12829 197 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 VEGFAP15692 232 aaPredicted RBP2.44□□□□□ -2.02
CHD3-217ENST00000574022 MALP21145 153 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 RRM1P23921 792 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 CTSSP25774 331 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 AFMP43652 599 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 PER3P56645 1201 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 HTRA4P83105 476 aaPredicted RBP2.44□□□□□ -2.02
CHD3-217ENST00000574022 PFKPQ01813 784 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 MEF2AQ02078 507 aaPredicted RBP2.44□□□□□ -2.02
CHD3-217ENST00000574022 APBA1Q02410 837 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 CREMQ03060 361 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 CHRNEQ04844 493 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 TARDBPQ13148 414 aaKnown RBP eCLIP2.44□□□□□ -2.02
CHD3-217ENST00000574022 PRKG2Q13237 762 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 PTK2BQ14289 1009 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 SPARCL1Q14515 664 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 KIR3DS1Q14943 382 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 AOC3Q16853 763 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 TIGD6Q17RP2 521 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 CCDC96Q2M329 555 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 FLYWCH1Q4VC44 716 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 FBXO47Q5MNV8 452 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 CD276Q5ZPR3 534 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 JMJD6Q6NYC1 403 aaPredicted RBP2.44□□□□□ -2.02
CHD3-217ENST00000574022 CNKSR3Q6P9H4 555 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 FBXO38Q6PIJ6 1188 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 C16orf54Q6UWD8 224 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 RNF44Q7L0R7 432 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 BMP8AQ7Z5Y6 402 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 MOGAT3Q86VF5 341 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 PPP1R3BQ86XI6 285 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 TMTC1Q8IUR5 882 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 PCYOX1LQ8NBM8 494 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 OR6B3Q8NGW1 331 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 CCHCR1Q8TD31 782 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 BRIX1Q8TDN6 353 aaKnown RBP2.44□□□□□ -2.02
CHD3-217ENST00000574022 KBTBD7Q8WVZ9 684 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 ASB12Q8WXK4 309 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms