RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 PPP2R5AQ15172 486 aa13.47□□□□□ -0.25
CCDC40-210ENST00000573903 MAPK6Q16659 721 aa13.47□□□□□ -0.25
CCDC40-210ENST00000573903 LIN9Q5TKA1 542 aa13.47□□□□□ -0.25
CCDC40-210ENST00000573903 HAUS3Q68CZ6 603 aa13.47□□□□□ -0.25
CCDC40-210ENST00000573903 CWF19L1Q69YN2 538 aaKnown RBP13.47□□□□□ -0.25
CCDC40-210ENST00000573903 SPATA31D4Q6ZUB0 917 aa13.47□□□□□ -0.25
CCDC40-210ENST00000573903 GET4Q7L5D6 327 aaPredicted RBP13.47□□□□□ -0.25
CCDC40-210ENST00000573903 DEPTORQ8TB45 409 aa13.47□□□□□ -0.25
CCDC40-210ENST00000573903 B3GALT6Q96L58 329 aa13.47□□□□□ -0.25
CCDC40-210ENST00000573903 GPR62Q9BZJ7 368 aa13.47□□□□□ -0.25
CCDC40-210ENST00000573903 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.47□□□□□ -0.25
CCDC40-210ENST00000573903 A0A087WWV3 80 aa13.46□□□□□ -0.25
CCDC40-210ENST00000573903 CASTOR2A6NHX0 329 aa13.46□□□□□ -0.25
CCDC40-210ENST00000573903 WNT7AO00755 349 aa13.46□□□□□ -0.25
CCDC40-210ENST00000573903 PRKCBP05771 671 aa13.46□□□□□ -0.25
CCDC40-210ENST00000573903 THP07101 528 aa13.46□□□□□ -0.25
CCDC40-210ENST00000573903 CFHP08603 1231 aa13.46□□□□□ -0.25
CCDC40-210ENST00000573903 OR52Z1P0C646 297 aa13.46□□□□□ -0.25
CCDC40-210ENST00000573903 LIG1P18858 919 aa13.46□□□□□ -0.25
CCDC40-210ENST00000573903 NBL1P41271 181 aa13.46□□□□□ -0.25
CCDC40-210ENST00000573903 ELAVL2Q12926 359 aaKnown RBP13.46□□□□□ -0.25
CCDC40-210ENST00000573903 FAM187BQ17R55 369 aa13.46□□□□□ -0.25
CCDC40-210ENST00000573903 CDCA2Q69YH5 1023 aaPredicted RBP13.46□□□□□ -0.25
CCDC40-210ENST00000573903 PDXDC1Q6P996 788 aa13.46□□□□□ -0.25
CCDC40-210ENST00000573903 APBB1IPQ7Z5R6 666 aaPredicted RBP13.46□□□□□ -0.25
CCDC40-210ENST00000573903 CATSPER3Q86XQ3 398 aa13.46□□□□□ -0.25
CCDC40-210ENST00000573903 CEP57Q86XR8 500 aa13.46□□□□□ -0.25
CCDC40-210ENST00000573903 GSTCDQ8NEC7 633 aa13.46□□□□□ -0.25
CCDC40-210ENST00000573903 HASPINQ8TF76 798 aa13.46□□□□□ -0.25
CCDC40-210ENST00000573903 POLR3CQ9BUI4 534 aaPredicted RBP13.46□□□□□ -0.25
CCDC40-210ENST00000573903 PRKD2Q9BZL6 878 aa13.46□□□□□ -0.25
CCDC40-210ENST00000573903 NT5C3AQ9H0P0 336 aa13.46□□□□□ -0.25
CCDC40-210ENST00000573903 TMEM60Q9H2L4 133 aa13.46□□□□□ -0.25
CCDC40-210ENST00000573903 EPS15L1Q9UBC2 864 aa13.46□□□□□ -0.25
CCDC40-210ENST00000573903 WNT16Q9UBV4 365 aa13.46□□□□□ -0.25
CCDC40-210ENST00000573903 DAXXQ9UER7 740 aaPredicted RBP13.46□□□□□ -0.25
CCDC40-210ENST00000573903 NARSO43776 548 aaKnown RBP13.45□□□□□ -0.26
CCDC40-210ENST00000573903 N4BP1O75113 896 aaKnown RBP13.45□□□□□ -0.26
CCDC40-210ENST00000573903 MED24O75448 989 aa13.45□□□□□ -0.26
CCDC40-210ENST00000573903 SPATA31C1P0DKV0 1188 aa13.45□□□□□ -0.26
CCDC40-210ENST00000573903 SRFP11831 508 aa13.45□□□□□ -0.26
CCDC40-210ENST00000573903 RPL17P18621 184 aaKnown RBP13.45□□□□□ -0.26
CCDC40-210ENST00000573903 NAMPTP43490 491 aa13.45□□□□□ -0.26
CCDC40-210ENST00000573903 GUCY1B3Q02153 619 aa13.45□□□□□ -0.26
CCDC40-210ENST00000573903 RABEP1Q15276 862 aa13.45□□□□□ -0.26
CCDC40-210ENST00000573903 POTEGQ6S5H5 508 aa13.45□□□□□ -0.26
CCDC40-210ENST00000573903 PADI6Q6TGC4 694 aa13.45□□□□□ -0.26
CCDC40-210ENST00000573903 PRSS55Q6UWB4 352 aaPredicted RBP13.45□□□□□ -0.26
CCDC40-210ENST00000573903 CCDC105Q8IYK2 499 aa13.45□□□□□ -0.26
CCDC40-210ENST00000573903 RABGGTAQ92696 567 aa13.45□□□□□ -0.26
CCDC40-210ENST00000573903 NKD2Q969F2 451 aaPredicted RBP13.45□□□□□ -0.26
CCDC40-210ENST00000573903 ZNF707Q96C28 371 aaPredicted RBP13.45□□□□□ -0.26
CCDC40-210ENST00000573903 C8orf76Q96K31 380 aa13.45□□□□□ -0.26
CCDC40-210ENST00000573903 IFT74Q96LB3 600 aa13.45□□□□□ -0.26
CCDC40-210ENST00000573903 MYADMQ96S97 322 aa13.45□□□□□ -0.26
CCDC40-210ENST00000573903 TTPALQ9BTX7 342 aa13.45□□□□□ -0.26
CCDC40-210ENST00000573903 FZD8Q9H461 694 aa13.45□□□□□ -0.26
CCDC40-210ENST00000573903 PDZD7Q9H5P4 517 aa13.45□□□□□ -0.26
CCDC40-210ENST00000573903 SNTG2Q9NY99 539 aa13.45□□□□□ -0.26
CCDC40-210ENST00000573903 PRR23AA6NEV1 266 aa13.44□□□□□ -0.26
CCDC40-210ENST00000573903 ZMYND10O75800 440 aa13.44□□□□□ -0.26
CCDC40-210ENST00000573903 RECQL4O94761 1208 aa13.44□□□□□ -0.26
CCDC40-210ENST00000573903 KIF4AO95239 1232 aa13.44□□□□□ -0.26
CCDC40-210ENST00000573903 MUTP22033 750 aa13.44□□□□□ -0.26
CCDC40-210ENST00000573903 RPA1P27694 616 aa13.44□□□□□ -0.26
CCDC40-210ENST00000573903 PSMD5Q16401 504 aa13.44□□□□□ -0.26
CCDC40-210ENST00000573903 DCAF4L1Q3SXM0 396 aa13.44□□□□□ -0.26
CCDC40-210ENST00000573903 RTP2Q5QGT7 225 aa13.44□□□□□ -0.26
CCDC40-210ENST00000573903 FAM171A1Q5VUB5 890 aa13.44□□□□□ -0.26
CCDC40-210ENST00000573903 SLC44A3Q8N4M1 653 aa13.44□□□□□ -0.26
CCDC40-210ENST00000573903 RSAD2Q8WXG1 361 aa13.44□□□□□ -0.26
CCDC40-210ENST00000573903 PIK3R5Q8WYR1 880 aa13.44□□□□□ -0.26
CCDC40-210ENST00000573903 FBXW11Q9UKB1 542 aa13.44□□□□□ -0.26
CCDC40-210ENST00000573903 CA14Q9ULX7 337 aa13.44□□□□□ -0.26
CCDC40-210ENST00000573903 NOL7Q9UMY1 257 aaKnown RBP13.44□□□□□ -0.26
CCDC40-210ENST00000573903 ZFP37Q9Y6Q3 630 aaPredicted RBP13.44□□□□□ -0.26
CCDC40-210ENST00000573903 DOCK8Q8NF50 2099 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 ACKR2O00590 384 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 XYLBO75191 536 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 PAPLNO95428 1278 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 HNRNPA1P09651 372 aaKnown RBP eCLIP13.43□□□□□ -0.26
CCDC40-210ENST00000573903 LAMP2P13473 410 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 NPR3P17342 541 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 CYP11B2P19099 503 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 FSHRP23945 695 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 EFNA5P52803 228 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 ANGPT1Q15389 498 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 ZNF174Q15697 407 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 TTC38Q5R3I4 469 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 PPM1LQ5SGD2 360 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 LILRA6Q6PI73 481 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 ASCL5Q7RTU5 278 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 FRMD5Q7Z6J6 570 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 NOSTRINQ8IVI9 506 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 CCDC83Q8IWF9 413 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 FAM184AQ8NB25 1140 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 DTWD2Q8NBA8 298 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 KIFAP3Q92845 792 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 TBC1D32Q96NH3 1257 aa13.43□□□□□ -0.26
CCDC40-210ENST00000573903 KIF2CQ99661 725 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms