RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 MAN1C1Q9NR34 630 aa19.99■□□□□ 0.79
CHD3-214ENST00000572579 ADAM28Q9UKQ2 775 aa19.99■□□□□ 0.79
CHD3-214ENST00000572579 NOL7Q9UMY1 257 aaKnown RBP19.99■□□□□ 0.79
CHD3-214ENST00000572579 USTQ9Y2C2 406 aa19.99■□□□□ 0.79
CHD3-214ENST00000572579 ZMYM2Q9UBW7 1377 aa19.98■□□□□ 0.79
CHD3-214ENST00000572579 CASTOR2A6NHX0 329 aa19.98■□□□□ 0.79
CHD3-214ENST00000572579 N4BP3O15049 544 aa19.98■□□□□ 0.79
CHD3-214ENST00000572579 PAPLNO95428 1278 aa19.98■□□□□ 0.79
CHD3-214ENST00000572579 CENPBP07199 599 aaPredicted RBP19.98■□□□□ 0.79
CHD3-214ENST00000572579 RTP2Q5QGT7 225 aa19.98■□□□□ 0.79
CHD3-214ENST00000572579 HAUS3Q68CZ6 603 aa19.98■□□□□ 0.79
CHD3-214ENST00000572579 C1orf186Q6ZWK4 172 aa19.98■□□□□ 0.79
CHD3-214ENST00000572579 PALB2Q86YC2 1186 aa19.98■□□□□ 0.79
CHD3-214ENST00000572579 HACE1Q8IYU2 909 aa19.98■□□□□ 0.79
CHD3-214ENST00000572579 SNX29Q8TEQ0 813 aa19.98■□□□□ 0.79
CHD3-214ENST00000572579 HASPINQ8TF76 798 aa19.98■□□□□ 0.79
CHD3-214ENST00000572579 PHOX2BQ99453 314 aa19.98■□□□□ 0.79
CHD3-214ENST00000572579 MEFVO15553 781 aaPredicted RBP19.97■□□□□ 0.79
CHD3-214ENST00000572579 TGM5O43548 720 aa19.97■□□□□ 0.79
CHD3-214ENST00000572579 KIF4AO95239 1232 aa19.97■□□□□ 0.79
CHD3-214ENST00000572579 NPTX2P47972 431 aa19.97■□□□□ 0.79
CHD3-214ENST00000572579 TCF15Q12870 199 aa19.97■□□□□ 0.79
CHD3-214ENST00000572579 TUSC3Q13454 348 aa19.97■□□□□ 0.79
CHD3-214ENST00000572579 HSP90AA2PQ14568 343 aaPredicted RBP19.97■□□□□ 0.79
CHD3-214ENST00000572579 RINT1Q6NUQ1 792 aa19.97■□□□□ 0.79
CHD3-214ENST00000572579 PRSS55Q6UWB4 352 aaPredicted RBP19.97■□□□□ 0.79
CHD3-214ENST00000572579 ALYREFQ86V81 257 aaKnown RBP19.97■□□□□ 0.79
CHD3-214ENST00000572579 CMASQ8NFW8 434 aaPredicted RBP19.97■□□□□ 0.79
CHD3-214ENST00000572579 RIN2Q8WYP3 895 aaPredicted RBP19.97■□□□□ 0.79
CHD3-214ENST00000572579 PNMA5Q96PV4 448 aa19.97■□□□□ 0.79
CHD3-214ENST00000572579 KCNH6Q9H252 994 aa19.97■□□□□ 0.79
CHD3-214ENST00000572579 PTPRHQ9HD43 1115 aa19.97■□□□□ 0.79
CHD3-214ENST00000572579 SORCS3Q9UPU3 1222 aa19.97■□□□□ 0.79
CHD3-214ENST00000572579 GDAQ9Y2T3 454 aa19.97■□□□□ 0.79
CHD3-214ENST00000572579 MYO10Q9HD67 2058 aa19.97■□□□□ 0.79
CHD3-214ENST00000572579 CCDC195A0A1B0GUA6 201 aa19.96■□□□□ 0.79
CHD3-214ENST00000572579 ADAM12O43184 909 aa19.96■□□□□ 0.79
CHD3-214ENST00000572579 HIP1RO75146 1068 aa19.96■□□□□ 0.79
CHD3-214ENST00000572579 ADH1AP07327 375 aa19.96■□□□□ 0.79
CHD3-214ENST00000572579 PRPHP41219 470 aa19.96■□□□□ 0.79
CHD3-214ENST00000572579 USP41Q3LFD5 358 aa19.96■□□□□ 0.79
CHD3-214ENST00000572579 C15orf39Q6ZRI6 1047 aa19.96■□□□□ 0.79
CHD3-214ENST00000572579 GLYCTKQ8IVS8 523 aa19.96■□□□□ 0.79
CHD3-214ENST00000572579 CEP120Q8N960 986 aa19.96■□□□□ 0.79
CHD3-214ENST00000572579 TDRD5Q8NAT2 981 aaKnown RBP19.96■□□□□ 0.79
CHD3-214ENST00000572579 KIFAP3Q92845 792 aa19.96■□□□□ 0.79
CHD3-214ENST00000572579 CLSTN3Q9BQT9 956 aa19.96■□□□□ 0.79
CHD3-214ENST00000572579 SSX2IPQ9Y2D8 614 aa19.96■□□□□ 0.79
CHD3-214ENST00000572579 SFI1A8K8P3 1242 aa19.95■□□□□ 0.78
CHD3-214ENST00000572579 ABLIM1O14639 778 aa19.95■□□□□ 0.78
CHD3-214ENST00000572579 NR1I2O75469 434 aa19.95■□□□□ 0.78
CHD3-214ENST00000572579 TADA2AO75478 443 aa19.95■□□□□ 0.78
CHD3-214ENST00000572579 GLUD1P00367 558 aa19.95■□□□□ 0.78
CHD3-214ENST00000572579 AVPR2P30518 371 aa19.95■□□□□ 0.78
CHD3-214ENST00000572579 PEX3P56589 373 aa19.95■□□□□ 0.78
CHD3-214ENST00000572579 ATP2C1P98194 919 aaPredicted RBP19.95■□□□□ 0.78
CHD3-214ENST00000572579 PPP2R5AQ15172 486 aa19.95■□□□□ 0.78
CHD3-214ENST00000572579 ATF7IP2Q5U623 682 aa19.95■□□□□ 0.78
CHD3-214ENST00000572579 DTHD1Q6ZMT9 781 aa19.95■□□□□ 0.78
CHD3-214ENST00000572579 ZBTB33Q86T24 672 aa19.95■□□□□ 0.78
CHD3-214ENST00000572579 GPR65Q8IYL9 337 aa19.95■□□□□ 0.78
CHD3-214ENST00000572579 LNX1Q8TBB1 728 aaPredicted RBP19.95■□□□□ 0.78
CHD3-214ENST00000572579 LRRC15Q8TF66 581 aa19.95■□□□□ 0.78
CHD3-214ENST00000572579 ACO2Q99798 780 aaKnown RBP19.95■□□□□ 0.78
CHD3-214ENST00000572579 NT5C3AQ9H0P0 336 aa19.95■□□□□ 0.78
CHD3-214ENST00000572579 FNIP2Q9P278 1114 aa19.95■□□□□ 0.78
CHD3-214ENST00000572579 ARHGAP28Q9P2N2 729 aa19.95■□□□□ 0.78
CHD3-214ENST00000572579 DNM3Q9UQ16 869 aa19.95■□□□□ 0.78
CHD3-214ENST00000572579 THP07101 528 aa19.94■□□□□ 0.78
CHD3-214ENST00000572579 GJB2P29033 226 aa19.94■□□□□ 0.78
CHD3-214ENST00000572579 EFNA5P52803 228 aa19.94■□□□□ 0.78
CHD3-214ENST00000572579 MTMR3Q13615 1198 aa19.94■□□□□ 0.78
CHD3-214ENST00000572579 GLRA4Q5JXX5 417 aa19.94■□□□□ 0.78
CHD3-214ENST00000572579 HYIQ5T013 277 aa19.94■□□□□ 0.78
CHD3-214ENST00000572579 MCTP1Q6DN14 999 aa19.94■□□□□ 0.78
CHD3-214ENST00000572579 ALKAL1Q6UXT8 129 aa19.94■□□□□ 0.78
CHD3-214ENST00000572579 UBALD2Q8IYN6 164 aa19.94■□□□□ 0.78
CHD3-214ENST00000572579 IFT74Q96LB3 600 aa19.94■□□□□ 0.78
CHD3-214ENST00000572579 PPP1R10Q96QC0 940 aaKnown RBP19.94■□□□□ 0.78
CHD3-214ENST00000572579 WDR6Q9NNW5 1121 aaKnown RBP19.94■□□□□ 0.78
CHD3-214ENST00000572579 TNFSF13BQ9Y275 285 aa19.94■□□□□ 0.78
CHD3-214ENST00000572579 CCDC169A6NNP5 214 aa19.93■□□□□ 0.78
CHD3-214ENST00000572579 K7ERI5 159 aa19.93■□□□□ 0.78
CHD3-214ENST00000572579 LAD1O00515 517 aa19.93■□□□□ 0.78
CHD3-214ENST00000572579 SOX4Q06945 474 aaPredicted RBP19.93■□□□□ 0.78
CHD3-214ENST00000572579 XKR4Q5GH76 650 aa19.93■□□□□ 0.78
CHD3-214ENST00000572579 FAM171A1Q5VUB5 890 aa19.93■□□□□ 0.78
CHD3-214ENST00000572579 KRT79Q5XKE5 535 aa19.93■□□□□ 0.78
CHD3-214ENST00000572579 CCDC149Q6ZUS6 474 aa19.93■□□□□ 0.78
CHD3-214ENST00000572579 PLCD3Q8N3E9 789 aa19.93■□□□□ 0.78
CHD3-214ENST00000572579 ZMAT2Q96NC0 199 aaKnown RBP19.93■□□□□ 0.78
CHD3-214ENST00000572579 MYADMQ96S97 322 aa19.93■□□□□ 0.78
CHD3-214ENST00000572579 PLIN2Q99541 437 aa19.93■□□□□ 0.78
CHD3-214ENST00000572579 TARS2Q9BW92 718 aaKnown RBP19.93■□□□□ 0.78
CHD3-214ENST00000572579 RHOBTB2Q9BYZ6 727 aa19.93■□□□□ 0.78
CHD3-214ENST00000572579 CDT1Q9H211 546 aa19.93■□□□□ 0.78
CHD3-214ENST00000572579 KCNK12Q9HB15 430 aa19.93■□□□□ 0.78
CHD3-214ENST00000572579 CACNA1HO95180 2353 aa19.93■□□□□ 0.78
CHD3-214ENST00000572579 DMDP11532 3685 aa19.92■□□□□ 0.78
CHD3-214ENST00000572579 USP34Q70CQ2 3546 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms