RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 TTC22Q5TAA0 569 aa11.33□□□□□ -0.6
CHMP6-203ENST00000572525 IL31Q6EBC2 164 aa11.33□□□□□ -0.6
CHMP6-203ENST00000572525 B4GALNT3Q6L9W6 998 aa11.33□□□□□ -0.6
CHMP6-203ENST00000572525 C1orf228Q6PIY5 440 aa11.33□□□□□ -0.6
CHMP6-203ENST00000572525 HACE1Q8IYU2 909 aa11.33□□□□□ -0.6
CHMP6-203ENST00000572525 KDF1Q8NAX2 398 aaPredicted RBP11.33□□□□□ -0.6
CHMP6-203ENST00000572525 ELSPBP1Q96BH3 223 aa11.33□□□□□ -0.6
CHMP6-203ENST00000572525 MSANTD3Q96H12 275 aa11.33□□□□□ -0.6
CHMP6-203ENST00000572525 C6orf50Q9HD87 102 aa11.33□□□□□ -0.6
CHMP6-203ENST00000572525 V9GY48 417 aaPredicted RBP11.33□□□□□ -0.6
CHMP6-203ENST00000572525 PCNX2A6NKB5 2137 aa11.33□□□□□ -0.6
CHMP6-203ENST00000572525 IGSF10Q6WRI0 2623 aa11.32□□□□□ -0.6
CHMP6-203ENST00000572525 MSH4O15457 936 aa11.32□□□□□ -0.6
CHMP6-203ENST00000572525 ASAP2O43150 1006 aa11.32□□□□□ -0.6
CHMP6-203ENST00000572525 PSMD10O75832 226 aa11.32□□□□□ -0.6
CHMP6-203ENST00000572525 GSPT1P15170 499 aaKnown RBP11.32□□□□□ -0.6
CHMP6-203ENST00000572525 USP11P51784 963 aa11.32□□□□□ -0.6
CHMP6-203ENST00000572525 ELAVL2Q12926 359 aaKnown RBP11.32□□□□□ -0.6
CHMP6-203ENST00000572525 GRIK3Q13003 919 aa11.32□□□□□ -0.6
CHMP6-203ENST00000572525 SIM2Q14190 667 aaPredicted RBP11.32□□□□□ -0.6
CHMP6-203ENST00000572525 RTN1Q16799 776 aa11.32□□□□□ -0.6
CHMP6-203ENST00000572525 N4BP2L1Q5TBK1 243 aaPredicted RBP11.32□□□□□ -0.6
CHMP6-203ENST00000572525 LRCH2Q5VUJ6 765 aa11.32□□□□□ -0.6
CHMP6-203ENST00000572525 NOTUMQ6P988 496 aa11.32□□□□□ -0.6
CHMP6-203ENST00000572525 IFNLR1Q8IU57 520 aaPredicted RBP11.32□□□□□ -0.6
CHMP6-203ENST00000572525 BICD2Q8TD16 824 aa11.32□□□□□ -0.6
CHMP6-203ENST00000572525 PSPC1Q8WXF1 523 aaKnown RBP11.32□□□□□ -0.6
CHMP6-203ENST00000572525 LOXL4Q96JB6 756 aa11.32□□□□□ -0.6
CHMP6-203ENST00000572525 NLRP4Q96MN2 994 aa11.32□□□□□ -0.6
CHMP6-203ENST00000572525 GAD1Q99259 594 aa11.32□□□□□ -0.6
CHMP6-203ENST00000572525 KXD1Q9BQD3 176 aa11.32□□□□□ -0.6
CHMP6-203ENST00000572525 UNC45AQ9H3U1 944 aa11.32□□□□□ -0.6
CHMP6-203ENST00000572525 DAXXQ9UER7 740 aaPredicted RBP11.32□□□□□ -0.6
CHMP6-203ENST00000572525 IPPQ9Y573 584 aa11.32□□□□□ -0.6
CHMP6-203ENST00000572525 KIF26AQ9ULI4 1882 aaPredicted RBP11.32□□□□□ -0.6
CHMP6-203ENST00000572525 DKC1O60832 514 aaKnown RBP eCLIP11.31□□□□□ -0.6
CHMP6-203ENST00000572525 MICAL2O94851 1124 aa11.31□□□□□ -0.6
CHMP6-203ENST00000572525 MLH1P40692 756 aa11.31□□□□□ -0.6
CHMP6-203ENST00000572525 CXCL12P48061 93 aa11.31□□□□□ -0.6
CHMP6-203ENST00000572525 SCNN1GP51170 649 aa11.31□□□□□ -0.6
CHMP6-203ENST00000572525 POU5F1BQ06416 359 aa11.31□□□□□ -0.6
CHMP6-203ENST00000572525 PABPC1LQ4VXU2 614 aaKnown RBP11.31□□□□□ -0.6
CHMP6-203ENST00000572525 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.31□□□□□ -0.6
CHMP6-203ENST00000572525 SPEM1Q8N4L4 309 aa11.31□□□□□ -0.6
CHMP6-203ENST00000572525 GSTCDQ8NEC7 633 aa11.31□□□□□ -0.6
CHMP6-203ENST00000572525 ITFG1Q8TB96 612 aa11.31□□□□□ -0.6
CHMP6-203ENST00000572525 SLC7A3Q8WY07 619 aa11.31□□□□□ -0.6
CHMP6-203ENST00000572525 IRF7Q92985 503 aa11.31□□□□□ -0.6
CHMP6-203ENST00000572525 CCDC136Q96JN2 1154 aa11.31□□□□□ -0.6
CHMP6-203ENST00000572525 CLSTN3Q9BQT9 956 aa11.31□□□□□ -0.6
CHMP6-203ENST00000572525 DHX33Q9H6R0 707 aaKnown RBP11.31□□□□□ -0.6
CHMP6-203ENST00000572525 MINDY3Q9H8M7 445 aa11.31□□□□□ -0.6
CHMP6-203ENST00000572525 HEBP1Q9NRV9 189 aa11.31□□□□□ -0.6
CHMP6-203ENST00000572525 FREM2Q5SZK8 3169 aa11.3□□□□□ -0.6
CHMP6-203ENST00000572525 CITO14578 2027 aa11.3□□□□□ -0.6
CHMP6-203ENST00000572525 SOBPA7XYQ1 873 aa11.3□□□□□ -0.6
CHMP6-203ENST00000572525 ZBTB43O43298 467 aa11.3□□□□□ -0.6
CHMP6-203ENST00000572525 GDF9O60383 454 aa11.3□□□□□ -0.6
CHMP6-203ENST00000572525 ERLIN2O94905 339 aa11.3□□□□□ -0.6
CHMP6-203ENST00000572525 ZNF806P0C7X5 589 aa11.3□□□□□ -0.6
CHMP6-203ENST00000572525 MYBP10242 640 aa11.3□□□□□ -0.6
CHMP6-203ENST00000572525 DEKP35659 375 aaKnown RBP11.3□□□□□ -0.6
CHMP6-203ENST00000572525 RFC5P40937 340 aa11.3□□□□□ -0.6
CHMP6-203ENST00000572525 PSMC5P62195 406 aa11.3□□□□□ -0.6
CHMP6-203ENST00000572525 NTHL1P78549 312 aa11.3□□□□□ -0.6
CHMP6-203ENST00000572525 NCBP1Q09161 790 aaKnown RBP11.3□□□□□ -0.6
CHMP6-203ENST00000572525 RAB33AQ14088 237 aa11.3□□□□□ -0.6
CHMP6-203ENST00000572525 PSMD5Q16401 504 aa11.3□□□□□ -0.6
CHMP6-203ENST00000572525 Q4G0T1 1027 aa11.3□□□□□ -0.6
CHMP6-203ENST00000572525 RTP2Q5QGT7 225 aa11.3□□□□□ -0.6
CHMP6-203ENST00000572525 PRR23BQ6ZRT6 265 aa11.3□□□□□ -0.6
CHMP6-203ENST00000572525 ANO5Q75V66 913 aa11.3□□□□□ -0.6
CHMP6-203ENST00000572525 MIER3Q7Z3K6 550 aa11.3□□□□□ -0.6
CHMP6-203ENST00000572525 LONP2Q86WA8 852 aa11.3□□□□□ -0.6
CHMP6-203ENST00000572525 KSR1Q8IVT5 923 aa11.3□□□□□ -0.6
CHMP6-203ENST00000572525 LNX1Q8TBB1 728 aaPredicted RBP11.3□□□□□ -0.6
CHMP6-203ENST00000572525 TTPALQ9BTX7 342 aa11.3□□□□□ -0.6
CHMP6-203ENST00000572525 C22orf23Q9BZE7 217 aa11.3□□□□□ -0.6
CHMP6-203ENST00000572525 CSRNP2Q9H175 543 aa11.3□□□□□ -0.6
CHMP6-203ENST00000572525 MIOSQ9NXC5 875 aa11.3□□□□□ -0.6
CHMP6-203ENST00000572525 MRPS23Q9Y3D9 190 aaKnown RBP11.3□□□□□ -0.6
CHMP6-203ENST00000572525 LOC400499M0QZD8 3231 aa11.3□□□□□ -0.6
CHMP6-203ENST00000572525 ASCC3Q8N3C0 2202 aaKnown RBP11.29□□□□□ -0.6
CHMP6-203ENST00000572525 PI4KAP42356 2102 aa11.29□□□□□ -0.6
CHMP6-203ENST00000572525 CCDC196A0A1B0GTZ2 297 aa11.29□□□□□ -0.6
CHMP6-203ENST00000572525 F8W810 466 aa11.29□□□□□ -0.6
CHMP6-203ENST00000572525 CCL16O15467 120 aa11.29□□□□□ -0.6
CHMP6-203ENST00000572525 HRO43593 1189 aa11.29□□□□□ -0.6
CHMP6-203ENST00000572525 CHMP2AO43633 222 aa11.29□□□□□ -0.6
CHMP6-203ENST00000572525 RPL17P18621 184 aaKnown RBP11.29□□□□□ -0.6
CHMP6-203ENST00000572525 LAMTOR4Q0VGL1 99 aa11.29□□□□□ -0.6
CHMP6-203ENST00000572525 PTGDRQ13258 359 aa11.29□□□□□ -0.6
CHMP6-203ENST00000572525 HSP90AA2PQ14568 343 aaPredicted RBP11.29□□□□□ -0.6
CHMP6-203ENST00000572525 LPAL2Q16609 132 aa11.29□□□□□ -0.6
CHMP6-203ENST00000572525 AXDND1Q5T1B0 1012 aaPredicted RBP11.29□□□□□ -0.6
CHMP6-203ENST00000572525 MOXD1Q6UVY6 613 aa11.29□□□□□ -0.6
CHMP6-203ENST00000572525 PRSS55Q6UWB4 352 aaPredicted RBP11.29□□□□□ -0.6
CHMP6-203ENST00000572525 UNQ6494/PRO21346Q6UXR6 183 aa11.29□□□□□ -0.6
CHMP6-203ENST00000572525 RAB11FIP4Q86YS3 637 aa11.29□□□□□ -0.6
CHMP6-203ENST00000572525 MAP4K3Q8IVH8 894 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms