RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 LY6KQ17RY6 165 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 ODF2Q5BJF6 829 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 EFCAB12Q6NXP0 572 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 RNF149Q8NC42 400 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 PARD3BQ8TEW8 1205 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 TMEM143Q96AN5 459 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 CHP1Q99653 195 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 FAM213AQ9BRX8 229 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 PDLIM7Q9NR12 457 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 TOPORSQ9NS56 1045 aaPredicted RBP6.5□□□□□ -1.37
CYLD-216ENST00000569891 WRAP73Q9P2S5 460 aaPredicted RBP6.5□□□□□ -1.37
CYLD-216ENST00000569891 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.5□□□□□ -1.37
CYLD-216ENST00000569891 STYXL1Q9Y6J8 313 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 ALPK3Q96L96 1907 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 MACROD2A1Z1Q3 448 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 GRID2IPA4D2P6 1211 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 USP27XA6NNY8 438 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 CTIFO43310 598 aaKnown RBP6.5□□□□□ -1.37
CYLD-216ENST00000569891 CAPN15O75808 1086 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 RGS20O76081 388 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 LGALS2P05162 132 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 CLTAP09496 248 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 CASP4P49662 377 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 PLCB4Q15147 1175 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 RPS6KA1Q15418 735 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 TARBP2Q15633 366 aaKnown RBP6.5□□□□□ -1.37
CYLD-216ENST00000569891 ZNF568Q3ZCX4 644 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 CCDC62Q6P9F0 684 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 PRPF31Q8WWY3 499 aaKnown RBP6.5□□□□□ -1.37
CYLD-216ENST00000569891 MS4A4AQ96JQ5 239 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 NRCAMQ92823 1304 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 ZMYM2Q9UBW7 1377 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 ARHGEF37A1IGU5 675 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 MIF4GDA9UHW6 222 aaKnown RBP6.5□□□□□ -1.37
CYLD-216ENST00000569891 H3BRB1 525 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 CES2O00748 559 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 KRT5P13647 590 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 GLRA2P23416 452 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 GCLMP48507 274 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 LAMTOR4Q0VGL1 99 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 BRD3Q15059 726 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 ARHGAP44Q17R89 818 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 SGSM1Q2NKQ1 1148 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 RHPN2Q8IUC4 686 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 BRSK2Q8IWQ3 736 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 NME8Q8N427 588 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 GLIS3Q8NEA6 775 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 U2AF1L4Q8WU68 220 aaKnown RBP6.5□□□□□ -1.37
CYLD-216ENST00000569891 MAML3Q96JK9 1138 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 FIZ1Q96SL8 496 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 CBWD1Q9BRT8 395 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 TUT1Q9H6E5 874 aaKnown RBP6.5□□□□□ -1.37
CYLD-216ENST00000569891 GPRC5CQ9NQ84 441 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 AMFRQ9UKV5 643 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 COQ4Q9Y3A0 265 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 MRFAP1Q9Y605 127 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 FHOD1Q9Y613 1164 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 MYH11P35749 1972 aa6.5□□□□□ -1.37
CYLD-216ENST00000569891 PTPRSQ13332 1948 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 NDC80O14777 642 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 ZBTB39O15060 712 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 TMEM253P0C7T8 217 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 AKR1A1P14550 325 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 SLC9A1P19634 815 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 MARK3P27448 753 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 POLR2BP30876 1174 aaKnown RBP6.49□□□□□ -1.37
CYLD-216ENST00000569891 NOGQ13253 232 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 ENOX2Q16206 610 aaKnown RBP6.49□□□□□ -1.37
CYLD-216ENST00000569891 GLIPR1L2Q4G1C9 344 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 TEX35Q5T0J7 233 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 ATF7IP2Q5U623 682 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 NLRP7Q8WX94 980 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 NCAPGQ9BPX3 1015 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 ASB7Q9H672 318 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 GPBP1L1Q9HC44 474 aaPredicted RBP6.49□□□□□ -1.37
CYLD-216ENST00000569891 MRPL47Q9HD33 250 aaKnown RBP6.49□□□□□ -1.37
CYLD-216ENST00000569891 TNFSF13BQ9Y275 285 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 F8VZ95 297 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 SRGAP2CP0DJJ0 459 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 ATICP31939 592 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 ITIH3Q06033 890 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 STILQ15468 1287 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 FAM187BQ17R55 369 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 GLE1Q53GS7 698 aaKnown RBP6.49□□□□□ -1.37
CYLD-216ENST00000569891 RFFLQ8WZ73 363 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 PURBQ96QR8 312 aaKnown RBP6.49□□□□□ -1.37
CYLD-216ENST00000569891 SEZ6LQ9BYH1 1024 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 TRIM6Q9C030 488 aaPredicted RBP6.49□□□□□ -1.37
CYLD-216ENST00000569891 TXNRD2Q9NNW7 524 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 XPNPEP1Q9NQW7 623 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 RNF216Q9NWF9 866 aaPredicted RBP6.49□□□□□ -1.37
CYLD-216ENST00000569891 ARHGAP20Q9P2F6 1191 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 ADAMTS1Q9UHI8 967 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 MYH9P35579 1960 aaKnown RBP6.49□□□□□ -1.37
CYLD-216ENST00000569891 EVI5O60447 810 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 TLR2O60603 784 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 RTN2O75298 545 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 TRIM49P0CI25 452 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 TRIM49CP0CI26 452 aa6.49□□□□□ -1.37
CYLD-216ENST00000569891 CDCA2Q69YH5 1023 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms