RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 MAGEB2O15479 319 aa7.15□□□□□ -1.26
SMG1-217ENST00000569764 POTEIP0CG38 1075 aa7.15□□□□□ -1.26
SMG1-217ENST00000569764 POTEJP0CG39 1038 aa7.15□□□□□ -1.26
SMG1-217ENST00000569764 FDPSP14324 419 aaKnown RBP7.15□□□□□ -1.26
SMG1-217ENST00000569764 TMEM11P17152 192 aa7.15□□□□□ -1.26
SMG1-217ENST00000569764 PPM1AP35813 382 aa7.15□□□□□ -1.26
SMG1-217ENST00000569764 KLRC3Q07444 240 aa7.15□□□□□ -1.26
SMG1-217ENST00000569764 KLHL30Q0D2K2 578 aa7.15□□□□□ -1.26
SMG1-217ENST00000569764 KLHL40Q2TBA0 621 aa7.15□□□□□ -1.26
SMG1-217ENST00000569764 ANKDD1AQ495B1 522 aa7.15□□□□□ -1.26
SMG1-217ENST00000569764 CCDC144CPQ8IYA2 1237 aa7.15□□□□□ -1.26
SMG1-217ENST00000569764 LCORLQ8N3X6 602 aa7.15□□□□□ -1.26
SMG1-217ENST00000569764 CNNM3Q8NE01 707 aa7.15□□□□□ -1.26
SMG1-217ENST00000569764 CFAP36Q96G28 342 aa7.15□□□□□ -1.26
SMG1-217ENST00000569764 CNDP1Q96KN2 507 aa7.15□□□□□ -1.26
SMG1-217ENST00000569764 RUNDC3BQ96NL0 473 aa7.15□□□□□ -1.26
SMG1-217ENST00000569764 STRBPQ96SI9 672 aaKnown RBP7.15□□□□□ -1.26
SMG1-217ENST00000569764 ELAC2Q9BQ52 826 aaKnown RBP7.15□□□□□ -1.26
SMG1-217ENST00000569764 CDV3Q9UKY7 258 aaKnown RBP7.15□□□□□ -1.26
SMG1-217ENST00000569764 MTUS1Q9ULD2 1270 aa7.15□□□□□ -1.26
SMG1-217ENST00000569764 ICMTO60725 284 aa7.15□□□□□ -1.27
SMG1-217ENST00000569764 CAVIN2O95810 425 aa7.15□□□□□ -1.27
SMG1-217ENST00000569764 UBXN1Q04323 297 aa7.15□□□□□ -1.27
SMG1-217ENST00000569764 ZSCAN23Q3MJ62 389 aa7.15□□□□□ -1.27
SMG1-217ENST00000569764 SMUG1Q53HV7 270 aa7.15□□□□□ -1.27
SMG1-217ENST00000569764 EFCAB13Q8IY85 973 aa7.15□□□□□ -1.27
SMG1-217ENST00000569764 PLD6Q8N2A8 252 aaKnown RBP7.15□□□□□ -1.27
SMG1-217ENST00000569764 LINC00469Q8N7U9 141 aa7.15□□□□□ -1.27
SMG1-217ENST00000569764 USP38Q8NB14 1042 aa7.15□□□□□ -1.27
SMG1-217ENST00000569764 SH3RF3Q8TEJ3 882 aaPredicted RBP7.15□□□□□ -1.27
SMG1-217ENST00000569764 FBF1Q8TES7 1133 aa7.15□□□□□ -1.27
SMG1-217ENST00000569764 TATDN2Q93075 761 aa7.15□□□□□ -1.27
SMG1-217ENST00000569764 GTF3C6Q969F1 213 aa7.15□□□□□ -1.27
SMG1-217ENST00000569764 ARL8AQ96BM9 186 aa7.15□□□□□ -1.27
SMG1-217ENST00000569764 ACSF2Q96CM8 615 aaPredicted RBP7.15□□□□□ -1.27
SMG1-217ENST00000569764 NAP1L3Q99457 506 aaPredicted RBP7.15□□□□□ -1.27
SMG1-217ENST00000569764 FTHL17Q9BXU8 183 aa7.15□□□□□ -1.27
SMG1-217ENST00000569764 HOMER3Q9NSC5 361 aa7.15□□□□□ -1.27
SMG1-217ENST00000569764 OGFRQ9NZT2 677 aa7.15□□□□□ -1.27
SMG1-217ENST00000569764 NFKBIL1Q9UBC1 381 aaPredicted RBP7.15□□□□□ -1.27
SMG1-217ENST00000569764 Q9Y3F1 56 aa7.15□□□□□ -1.27
SMG1-217ENST00000569764 NEDD4P46934 1319 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 ANKRD31Q8N7Z5 1873 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 LZTS3O60299 673 aaPredicted RBP7.14□□□□□ -1.27
SMG1-217ENST00000569764 DDHD2O94830 711 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 F13A1P00488 732 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 APOA4P06727 396 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 ADORA2AP29274 412 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 CDC25CP30307 473 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 CREMQ03060 361 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 KCNH2Q12809 1159 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 PIN1Q13526 163 aaPredicted RBP7.14□□□□□ -1.27
SMG1-217ENST00000569764 COL9A2Q14055 689 aaPredicted RBP7.14□□□□□ -1.27
SMG1-217ENST00000569764 MORC3Q14149 939 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 BBS9Q3SYG4 887 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 BNC2Q6ZN30 1099 aaPredicted RBP7.14□□□□□ -1.27
SMG1-217ENST00000569764 KIAA0907Q7Z7F0 614 aaPredicted RBP7.14□□□□□ -1.27
SMG1-217ENST00000569764 FCHSD1Q86WN1 690 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 MB21D2Q8IYB1 491 aaPredicted RBP7.14□□□□□ -1.27
SMG1-217ENST00000569764 NEDD1Q8NHV4 660 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 P2RX7Q99572 595 aaKnown RBP7.14□□□□□ -1.27
SMG1-217ENST00000569764 PYM1Q9BRP8 204 aaKnown RBP7.14□□□□□ -1.27
SMG1-217ENST00000569764 DACT1Q9NYF0 836 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 PSD3Q9NYI0 1048 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 COQ3Q9NZJ6 369 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 STRIP2Q9ULQ0 834 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 GAKO14976 1311 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 LSM1O15116 133 aaKnown RBP7.14□□□□□ -1.27
SMG1-217ENST00000569764 HSPA4LO95757 839 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 AKR1B1P15121 316 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 CNTFP26441 200 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 HOXD12P35452 270 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 ARHGAP4P98171 946 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 CTDSPL2Q05D32 466 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 SSRP1Q08945 709 aaKnown RBP7.14□□□□□ -1.27
SMG1-217ENST00000569764 NFIAQ12857 509 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 MUM1L1Q5H9M0 696 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 CCDC122Q5T0U0 273 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 CST9Q5W186 159 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 TDHQ8IZJ6 230 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 DHTKD1Q96HY7 919 aaPredicted RBP7.14□□□□□ -1.27
SMG1-217ENST00000569764 C12orf42Q96LP6 360 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 COG8Q96MW5 612 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 SYNCQ9H7C4 482 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 DNMT3AQ9Y6K1 912 aaPredicted RBP7.14□□□□□ -1.27
SMG1-217ENST00000569764 CYP2D7A0A087X1C5 515 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 GSG1L2A8MUP6 293 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 CASQ2O14958 399 aaPredicted RBP7.14□□□□□ -1.27
SMG1-217ENST00000569764 SNX4O95219 450 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 RXRAP19793 462 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 PDIA3P30101 505 aaKnown RBP7.14□□□□□ -1.27
SMG1-217ENST00000569764 GRM3Q14832 879 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 RTN1Q16799 776 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 MZT2BQ6NZ67 158 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 MZT2AQ6P582 158 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 CATSPERGQ6ZRH7 1159 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 DHX32Q7L7V1 743 aaKnown RBP7.14□□□□□ -1.27
SMG1-217ENST00000569764 HEATR4Q86WZ0 1026 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 PJA1Q8NG27 643 aa7.14□□□□□ -1.27
SMG1-217ENST00000569764 TCP11Q8WWU5 503 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms