RNA–Protein interactions for RNA: ENST00000569606.1

EDC3-217, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-217ENST00000569606 TRAIPQ9BWF2 469 aa13.61□□□□□ -0.23
EDC3-217ENST00000569606 ARMCX3Q9UH62 379 aaPredicted RBP13.61□□□□□ -0.23
EDC3-217ENST00000569606 CITO14578 2027 aa13.61□□□□□ -0.23
EDC3-217ENST00000569606 AP5Z1O43299 807 aa13.6□□□□□ -0.23
EDC3-217ENST00000569606 CLTAP09496 248 aa13.6□□□□□ -0.23
EDC3-217ENST00000569606 STAG3L1P0CL83 205 aa13.6□□□□□ -0.23
EDC3-217ENST00000569606 RAG1P15918 1043 aa13.6□□□□□ -0.23
EDC3-217ENST00000569606 RFC2P35250 354 aa13.6□□□□□ -0.23
EDC3-217ENST00000569606 OSTNP61366 133 aa13.6□□□□□ -0.23
EDC3-217ENST00000569606 FANCCQ00597 558 aa13.6□□□□□ -0.23
EDC3-217ENST00000569606 POU5F1Q01860 360 aaKnown RBP13.6□□□□□ -0.23
EDC3-217ENST00000569606 CYP24A1Q07973 514 aa13.6□□□□□ -0.23
EDC3-217ENST00000569606 BFSP1Q12934 665 aa13.6□□□□□ -0.23
EDC3-217ENST00000569606 SARM1Q6SZW1 724 aa13.6□□□□□ -0.23
EDC3-217ENST00000569606 FAM43BQ6ZT52 329 aaPredicted RBP13.6□□□□□ -0.23
EDC3-217ENST00000569606 INTS8Q75QN2 995 aaKnown RBP13.6□□□□□ -0.23
EDC3-217ENST00000569606 RTN4RL1Q86UN2 441 aaPredicted RBP13.6□□□□□ -0.23
EDC3-217ENST00000569606 BRSK2Q8IWQ3 736 aa13.6□□□□□ -0.23
EDC3-217ENST00000569606 SMG8Q8ND04 991 aaKnown RBP13.6□□□□□ -0.23
EDC3-217ENST00000569606 PLEKHO2Q8TD55 490 aa13.6□□□□□ -0.23
EDC3-217ENST00000569606 LINC01599Q8WXQ3 324 aa13.6□□□□□ -0.23
EDC3-217ENST00000569606 APBB2Q92870 758 aa13.6□□□□□ -0.23
EDC3-217ENST00000569606 ADAM2Q99965 735 aa13.6□□□□□ -0.23
EDC3-217ENST00000569606 TUBGCP2Q9BSJ2 902 aa13.6□□□□□ -0.23
EDC3-217ENST00000569606 HTATIP2Q9BUP3 242 aa13.6□□□□□ -0.23
EDC3-217ENST00000569606 FTHL17Q9BXU8 183 aa13.6□□□□□ -0.23
EDC3-217ENST00000569606 TRIM6Q9C030 488 aaPredicted RBP13.6□□□□□ -0.23
EDC3-217ENST00000569606 FAM105AQ9NUU6 356 aa13.6□□□□□ -0.23
EDC3-217ENST00000569606 TAB2Q9NYJ8 693 aa13.6□□□□□ -0.23
EDC3-217ENST00000569606 IPPQ9Y573 584 aa13.6□□□□□ -0.23
EDC3-217ENST00000569606 MICAL3Q7RTP6 2002 aa13.59□□□□□ -0.23
EDC3-217ENST00000569606 MEFVO15553 781 aaPredicted RBP13.59□□□□□ -0.23
EDC3-217ENST00000569606 KRT13P13646 458 aa13.59□□□□□ -0.23
EDC3-217ENST00000569606 MRE11P49959 708 aa13.59□□□□□ -0.23
EDC3-217ENST00000569606 VAMP7P51809 220 aa13.59□□□□□ -0.23
EDC3-217ENST00000569606 COPB1P53618 953 aaKnown RBP13.59□□□□□ -0.23
EDC3-217ENST00000569606 WNT7BP56706 349 aa13.59□□□□□ -0.23
EDC3-217ENST00000569606 ENPEPQ07075 957 aa13.59□□□□□ -0.23
EDC3-217ENST00000569606 PSMD6Q15008 389 aa13.59□□□□□ -0.23
EDC3-217ENST00000569606 ENOX2Q16206 610 aaKnown RBP13.59□□□□□ -0.23
EDC3-217ENST00000569606 MAN2A1Q16706 1144 aa13.59□□□□□ -0.23
EDC3-217ENST00000569606 TCTN1Q2MV58 587 aa13.59□□□□□ -0.23
EDC3-217ENST00000569606 MIIPQ5JXC2 388 aa13.59□□□□□ -0.23
EDC3-217ENST00000569606 MFSD5Q6N075 450 aa13.59□□□□□ -0.23
EDC3-217ENST00000569606 DEFB128Q7Z7B8 93 aa13.59□□□□□ -0.23
EDC3-217ENST00000569606 C7orf61Q8IZ16 206 aa13.59□□□□□ -0.23
EDC3-217ENST00000569606 ANKRD20A12PQ8NF67 263 aa13.59□□□□□ -0.23
EDC3-217ENST00000569606 TMC2Q8TDI7 906 aa13.59□□□□□ -0.23
EDC3-217ENST00000569606 PARD3BQ8TEW8 1205 aa13.59□□□□□ -0.23
EDC3-217ENST00000569606 SEPT8Q92599 483 aa13.59□□□□□ -0.23
EDC3-217ENST00000569606 SLC35C1Q96A29 364 aa13.59□□□□□ -0.23
EDC3-217ENST00000569606 CCDC94Q9BW85 323 aaPredicted RBP13.59□□□□□ -0.23
EDC3-217ENST00000569606 NXF3Q9H4D5 531 aaKnown RBP13.59□□□□□ -0.23
EDC3-217ENST00000569606 RPF1Q9H9Y2 349 aaKnown RBP13.59□□□□□ -0.23
EDC3-217ENST00000569606 RGS18Q9NS28 235 aa13.59□□□□□ -0.23
EDC3-217ENST00000569606 SNTG2Q9NY99 539 aa13.59□□□□□ -0.23
EDC3-217ENST00000569606 RBAKQ9NYW8 714 aaPredicted RBP13.59□□□□□ -0.23
EDC3-217ENST00000569606 HES2Q9Y543 173 aa13.59□□□□□ -0.23
EDC3-217ENST00000569606 PCDHB2Q9Y5E7 798 aa13.59□□□□□ -0.23
EDC3-217ENST00000569606 TRIP11Q15643 1979 aa13.59□□□□□ -0.23
EDC3-217ENST00000569606 PDCD11Q14690 1871 aaKnown RBP13.59□□□□□ -0.23
EDC3-217ENST00000569606 A0A0U1RQF3 1178 aa13.58□□□□□ -0.24
EDC3-217ENST00000569606 ZNF623O75123 536 aa13.58□□□□□ -0.24
EDC3-217ENST00000569606 SERPINC1P01008 464 aa13.58□□□□□ -0.24
EDC3-217ENST00000569606 CXCL8P10145 99 aa13.58□□□□□ -0.24
EDC3-217ENST00000569606 PRKCSHP14314 528 aaPredicted RBP13.58□□□□□ -0.24
EDC3-217ENST00000569606 CSF2RAP15509 400 aa13.58□□□□□ -0.24
EDC3-217ENST00000569606 RAB27AP51159 221 aa13.58□□□□□ -0.24
EDC3-217ENST00000569606 DLG4P78352 724 aa13.58□□□□□ -0.24
EDC3-217ENST00000569606 PLCB2Q00722 1185 aa13.58□□□□□ -0.24
EDC3-217ENST00000569606 SLC10A6Q3KNW5 377 aa13.58□□□□□ -0.24
EDC3-217ENST00000569606 VWA3BQ502W6 1294 aa13.58□□□□□ -0.24
EDC3-217ENST00000569606 C1orf220Q5T0J3 134 aa13.58□□□□□ -0.24
EDC3-217ENST00000569606 MRPL10Q7Z7H8 261 aaKnown RBP13.58□□□□□ -0.24
EDC3-217ENST00000569606 TMEM199Q8N511 208 aa13.58□□□□□ -0.24
EDC3-217ENST00000569606 CCDC127Q96BQ5 260 aa13.58□□□□□ -0.24
EDC3-217ENST00000569606 ACAP3Q96P50 834 aa13.58□□□□□ -0.24
EDC3-217ENST00000569606 VPS16Q9H269 839 aa13.58□□□□□ -0.24
EDC3-217ENST00000569606 TSPYL2Q9H2G4 693 aaPredicted RBP13.58□□□□□ -0.24
EDC3-217ENST00000569606 RNF39Q9H2S5 420 aa13.58□□□□□ -0.24
EDC3-217ENST00000569606 PDE11AQ9HCR9 933 aa13.58□□□□□ -0.24
EDC3-217ENST00000569606 C1orf112Q9NSG2 853 aa13.58□□□□□ -0.24
EDC3-217ENST00000569606 IFNKQ9P0W0 207 aa13.58□□□□□ -0.24
EDC3-217ENST00000569606 PCDH10Q9P2E7 1040 aa13.58□□□□□ -0.24
EDC3-217ENST00000569606 PRKAG2Q9UGJ0 569 aa13.58□□□□□ -0.24
EDC3-217ENST00000569606 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.58□□□□□ -0.24
EDC3-217ENST00000569606 A0A1B0GTH6 734 aa13.57□□□□□ -0.24
EDC3-217ENST00000569606 TTC26A0AVF1 554 aa13.57□□□□□ -0.24
EDC3-217ENST00000569606 LRRIQ3A6PVS8 624 aaPredicted RBP13.57□□□□□ -0.24
EDC3-217ENST00000569606 C9IYK1 514 aa13.57□□□□□ -0.24
EDC3-217ENST00000569606 ENPP3O14638 875 aa13.57□□□□□ -0.24
EDC3-217ENST00000569606 EVI5O60447 810 aa13.57□□□□□ -0.24
EDC3-217ENST00000569606 RECQL4O94761 1208 aa13.57□□□□□ -0.24
EDC3-217ENST00000569606 TRIM49P0CI25 452 aa13.57□□□□□ -0.24
EDC3-217ENST00000569606 TRIM49CP0CI26 452 aa13.57□□□□□ -0.24
EDC3-217ENST00000569606 ATF7P17544 494 aaPredicted RBP13.57□□□□□ -0.24
EDC3-217ENST00000569606 AKAP5P24588 427 aa13.57□□□□□ -0.24
EDC3-217ENST00000569606 UBASH3AP57075 661 aa13.57□□□□□ -0.24
EDC3-217ENST00000569606 CLDN10P78369 228 aa13.57□□□□□ -0.24
EDC3-217ENST00000569606 PPP2R3AQ06190 1150 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms