RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 GPR155Q7Z3F1 870 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 CYP2U1Q7Z449 544 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 GLYCTKQ8IVS8 523 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 HDDC3Q8N4P3 179 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 URGCPQ8TCY9 931 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 APOL6Q9BWW8 343 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 NUSAP1Q9BXS6 441 aaKnown RBP7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 JPH1Q9HDC5 661 aaPredicted RBP7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 HCFC1R1Q9NWW0 138 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 KANSL3Q9P2N6 904 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 ANKMY1Q9P2S6 941 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 SLC8A2Q9UPR5 921 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 TNNQ9UQP3 1299 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 ZMYM2Q9UBW7 1377 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 KIAA1549LQ6ZVL6 1849 aa7.54□□□□□ -1.2
HERPUD1-217ENST00000569429 SALL3Q9BXA9 1300 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 TRABD2BA6NFA1 517 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 ZNF263O14978 683 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 DCLK1O15075 740 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 FOXP2O15409 715 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 MAFGO15525 162 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 ATG13O75143 517 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 ATG7O95352 703 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 C22orf31O95567 290 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 DARSP14868 501 aaKnown RBP7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 ENGP17813 658 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 CTHP32929 405 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 SLC5A9Q2M3M2 681 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 UVSSAQ2YD98 709 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 USP41Q3LFD5 358 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 TRIM61Q5EBN2 209 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 FAM78AQ5JUQ0 283 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 PKN3Q6P5Z2 889 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 TOGARAM2Q6ZUX3 1019 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 RTL10Q7L3V2 364 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 RALGPS2Q86X27 583 aaPredicted RBP7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 DGKHQ86XP1 1220 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 TRMT2AQ8IZ69 625 aaKnown RBP7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 TMEM57Q8N5G2 664 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 PNPLA1Q8N8W4 532 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 PNMA1Q8ND90 353 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 ASB16Q96NS5 453 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 DCBLD2Q96PD2 775 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 MRS2Q9HD23 443 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 POLMQ9NP87 494 aaPredicted RBP7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 TOMM22Q9NS69 142 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 FAM105AQ9NUU6 356 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 KIAA1522Q9P206 1035 aaPredicted RBP7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 NXF1Q9UBU9 619 aaKnown RBP7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 SLC9A2Q9UBY0 812 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 EBF1Q9UH73 591 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 IL17BQ9UHF5 180 aa7.53□□□□□ -1.2
HERPUD1-217ENST00000569429 MYLKQ15746 1914 aa7.52□□□□□ -1.2
HERPUD1-217ENST00000569429 ZNF638Q14966 1978 aaKnown RBP7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 IGKV6D-21A0A0A0MT36 114 aa7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 TRIM6-TRIM34B2RNG4 842 aa7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 SPECC1L-ADORA2AF8WAN1 911 aa7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 NRG2O14511 850 aaPredicted RBP7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 SLC28A2O43868 658 aa7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 MAFO75444 373 aaPredicted RBP7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 MICAL2O94851 1124 aa7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 RHOP08100 348 aa7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 PARP1P09874 1014 aaKnown RBP7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 CD59P13987 128 aa7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 CEBPBP17676 345 aa7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 ITGB5P18084 799 aa7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 RPL17P18621 184 aaKnown RBP7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 GBP1P32455 592 aa7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 RAB27AP51159 221 aa7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 ACTR2P61160 394 aa7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 SERINC3Q13530 473 aa7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 CAMK2BQ13554 666 aa7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 MAPK6Q16659 721 aa7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 LONRF3Q496Y0 759 aa7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 SLC23A3Q6PIS1 610 aa7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 MFSD6LQ8IWD5 586 aa7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 COLGALT2Q8IYK4 626 aa7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 CSGALNACT1Q8TDX6 532 aa7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 PIGKQ92643 395 aa7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 PGBD4Q96DM1 585 aa7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 SEC62Q99442 399 aaKnown RBP7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 SEPT9Q9UHD8 586 aaPredicted RBP7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 DNMT3LQ9UJW3 386 aa7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 APOBEC2Q9Y235 224 aaKnown RBP7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 PRG3Q9Y2Y8 225 aaPredicted RBP7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 CNTNAP2Q9UHC6 1331 aa7.52□□□□□ -1.21
HERPUD1-217ENST00000569429 NUP210Q8TEM1 1887 aaPredicted RBP7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 UTP20O75691 2785 aaKnown RBP7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 SLC38A8A6NNN8 435 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 E9PAM4 449 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 CHADO15335 359 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 MAGEB2O15479 319 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 OPHN1O60890 802 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 C6P13671 934 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 PRKCSHP14314 528 aaPredicted RBP7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 FGFR4P22455 802 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 EIF2S3P41091 472 aaKnown RBP7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 SOX9P48436 509 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 VASPP50552 380 aaPredicted RBP7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 GPC3P51654 580 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms