RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 NET1Q7Z628 596 aaPredicted RBP7.51□□□□□ -1.21
CNOT1-216ENST00000569240 RNF217Q8TC41 542 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 PRDM11Q9NQV5 511 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 SUPT3HO75486 399 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 CHRM1P11229 460 aaPredicted RBP7.5□□□□□ -1.21
CNOT1-216ENST00000569240 TSHRP16473 764 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 ARL4AP40617 200 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 MXI1P50539 228 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 CHN2P52757 468 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 CSTF3Q12996 717 aaKnown RBP7.5□□□□□ -1.21
CNOT1-216ENST00000569240 TRIP13Q15645 432 aaPredicted RBP7.5□□□□□ -1.21
CNOT1-216ENST00000569240 IZUMO3Q5VZ72 239 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 SGMS1Q86VZ5 419 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 NOA1Q8NC60 698 aaKnown RBP7.5□□□□□ -1.21
CNOT1-216ENST00000569240 PI4K2BQ8TCG2 481 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 MAGEB5Q9BZ81 275 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 MANSC1Q9H8J5 431 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 GINM1Q9NU53 330 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 RNMTO43148 476 aaKnown RBP7.5□□□□□ -1.21
CNOT1-216ENST00000569240 PDE8AO60658 829 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 SRP72O76094 671 aaKnown RBP7.5□□□□□ -1.21
CNOT1-216ENST00000569240 IZUMO2Q6UXV1 221 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 KRT73Q86Y46 540 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 JAMLQ86YT9 394 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 KCNB2Q92953 911 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 CNKSR1Q969H4 720 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 DCTN4Q9UJW0 460 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 SOX13Q9UN79 622 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 SRGAP2O75044 1071 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 ZBED1O96006 694 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 KRT14P02533 472 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 SNRPAP09012 282 aaKnown RBP7.5□□□□□ -1.21
CNOT1-216ENST00000569240 TP53BP2Q13625 1128 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 HIF1AQ16665 826 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 PM20D2Q8IYS1 436 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 PPM1KQ8N3J5 372 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 ANKS1AQ92625 1134 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 NACC1Q96RE7 527 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 ZBTB3Q9H5J0 574 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 ADA2Q9NZK5 511 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 TBC1D7Q9P0N9 293 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 MKL2Q9ULH7 1088 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 ARHGEF37A1IGU5 675 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 AP3M2P53677 418 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 RAD9BQ6WBX8 426 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 MIGA1Q8NAN2 632 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 THTPAQ9BU02 230 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 EFCAB1Q9HAE3 211 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 DNAJB4Q9UDY4 337 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 WDR91A4D1P6 747 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 ATP5J2-PTCD1G3V325 749 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 PTCD1O75127 700 aaKnown RBP7.5□□□□□ -1.21
CNOT1-216ENST00000569240 RHOBTB1O94844 696 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 RXRAP19793 462 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 CDH3P22223 829 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 HK2P52789 917 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 TOB2Q14106 344 aaPredicted RBP7.5□□□□□ -1.21
CNOT1-216ENST00000569240 DARS2Q6PI48 645 aaKnown RBP7.5□□□□□ -1.21
CNOT1-216ENST00000569240 TMEM110Q86TL2 294 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 SUCLG2Q96I99 432 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 GPAMQ9HCL2 828 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 STARD13Q9Y3M8 1113 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 ADGBQ8N7X0 1667 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 ZNF532Q9HCE3 1301 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 TMEM247A6NEH6 219 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 NBPF26B4DH59 902 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 ZPR1O75312 459 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 CAPN1P07384 714 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 RXRGP48443 463 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 ITGA1P56199 1179 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 TAF2Q6P1X5 1199 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 G2E3Q7L622 706 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 RCOR2Q8IZ40 523 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 ADSSL1Q8N142 457 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 NAT9Q9BTE0 207 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 DAPK2Q9UIK4 370 aa7.5□□□□□ -1.21
CNOT1-216ENST00000569240 SAGE2PA6NJ88 616 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 UBOX5O94941 541 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 RHOBTB3O94955 611 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 UNC5CO95185 931 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 ADSLP30566 484 aaPredicted RBP7.49□□□□□ -1.21
CNOT1-216ENST00000569240 KRT20P35900 424 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 ANGPT1Q15389 498 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 TMEM237Q96Q45 408 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 GIN1Q9NXP7 522 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 SF3A3Q12874 501 aaKnown RBP eCLIP7.49□□□□□ -1.213e-7■■■■■ 36.3
CNOT1-216ENST00000569240 ITGB3BPQ13352 177 aaPredicted RBP7.49□□□□□ -1.21
CNOT1-216ENST00000569240 LRRC36Q1X8D7 754 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 PPP6R3Q5H9R7 873 aaPredicted RBP7.49□□□□□ -1.21
CNOT1-216ENST00000569240 CEP78Q5JTW2 689 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 SETD9Q8NE22 299 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 TUBGCP5Q96RT8 1024 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 RBM12Q9NTZ6 932 aaKnown RBP7.49□□□□□ -1.21
CNOT1-216ENST00000569240 GALNT8Q9NY28 637 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 PHTF1Q9UMS5 762 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 DMRT2Q9Y5R5 561 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 SNTNA6NMZ2 147 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 PRR23D1E9PI22 279 aaPredicted RBP7.49□□□□□ -1.21
CNOT1-216ENST00000569240 DLGAP3O95886 979 aa7.49□□□□□ -1.21
CNOT1-216ENST00000569240 PRR23D2P0DMB1 279 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms