RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 IDEP14735 1019 aa13.73□□□□□ -0.21
NSMCE1-214ENST00000569236 LAG3P18627 525 aa13.73□□□□□ -0.21
NSMCE1-214ENST00000569236 GPM6BQ13491 265 aa13.73□□□□□ -0.21
NSMCE1-214ENST00000569236 DCAF4L1Q3SXM0 396 aa13.73□□□□□ -0.21
NSMCE1-214ENST00000569236 NOMO2Q5JPE7 1267 aa13.73□□□□□ -0.21
NSMCE1-214ENST00000569236 LRRC55Q6ZSA7 311 aa13.73□□□□□ -0.21
NSMCE1-214ENST00000569236 TRIML1Q8N9V2 468 aa13.73□□□□□ -0.21
NSMCE1-214ENST00000569236 SLC17A8Q8NDX2 589 aa13.73□□□□□ -0.21
NSMCE1-214ENST00000569236 SPATA20Q8TB22 786 aa13.73□□□□□ -0.21
NSMCE1-214ENST00000569236 P2RX5Q93086 422 aa13.73□□□□□ -0.21
NSMCE1-214ENST00000569236 DNAJC19Q96DA6 116 aa13.73□□□□□ -0.21
NSMCE1-214ENST00000569236 MRFAP1L1Q96HT8 127 aa13.73□□□□□ -0.21
NSMCE1-214ENST00000569236 ACO2Q99798 780 aaKnown RBP13.73□□□□□ -0.21
NSMCE1-214ENST00000569236 RNF39Q9H2S5 420 aa13.73□□□□□ -0.21
NSMCE1-214ENST00000569236 CWH43Q9H720 699 aa13.73□□□□□ -0.21
NSMCE1-214ENST00000569236 KBTBD4Q9NVX7 518 aa13.73□□□□□ -0.21
NSMCE1-214ENST00000569236 HCSTQ9UBK5 93 aa13.73□□□□□ -0.21
NSMCE1-214ENST00000569236 SERTAD1Q9UHV2 236 aa13.73□□□□□ -0.21
NSMCE1-214ENST00000569236 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.73□□□□□ -0.21
NSMCE1-214ENST00000569236 SLFN14P0C7P3 912 aa13.72□□□□□ -0.21
NSMCE1-214ENST00000569236 GAP43P17677 238 aa13.72□□□□□ -0.21
NSMCE1-214ENST00000569236 ABCD1P33897 745 aa13.72□□□□□ -0.21
NSMCE1-214ENST00000569236 RNASELQ05823 741 aaKnown RBP13.72□□□□□ -0.21
NSMCE1-214ENST00000569236 EEF1DP3Q658K8 133 aa13.72□□□□□ -0.21
NSMCE1-214ENST00000569236 SFR1Q86XK3 245 aa13.72□□□□□ -0.21
NSMCE1-214ENST00000569236 KCNN1Q92952 543 aa13.72□□□□□ -0.21
NSMCE1-214ENST00000569236 TCHPQ9BT92 498 aa13.72□□□□□ -0.21
NSMCE1-214ENST00000569236 TARS2Q9BW92 718 aaKnown RBP13.72□□□□□ -0.21
NSMCE1-214ENST00000569236 TBC1D13Q9NVG8 400 aa13.72□□□□□ -0.21
NSMCE1-214ENST00000569236 KANSL3Q9P2N6 904 aa13.72□□□□□ -0.21
NSMCE1-214ENST00000569236 SEL1LQ9UBV2 794 aa13.72□□□□□ -0.21
NSMCE1-214ENST00000569236 PARP2Q9UGN5 583 aa13.72□□□□□ -0.21
NSMCE1-214ENST00000569236 GIT1Q9Y2X7 761 aa13.72□□□□□ -0.21
NSMCE1-214ENST00000569236 POU3F3P20264 500 aaPredicted RBP13.71□□□□□ -0.21
NSMCE1-214ENST00000569236 AKAP5P24588 427 aa13.71□□□□□ -0.21
NSMCE1-214ENST00000569236 NMT1P30419 496 aaKnown RBP13.71□□□□□ -0.21
NSMCE1-214ENST00000569236 MLH1P40692 756 aa13.71□□□□□ -0.21
NSMCE1-214ENST00000569236 PTPROQ16827 1216 aa13.71□□□□□ -0.21
NSMCE1-214ENST00000569236 ZNF568Q3ZCX4 644 aa13.71□□□□□ -0.21
NSMCE1-214ENST00000569236 KLHL23Q8NBE8 558 aa13.71□□□□□ -0.21
NSMCE1-214ENST00000569236 COLGALT1Q8NBJ5 622 aa13.71□□□□□ -0.21
NSMCE1-214ENST00000569236 BICD1Q96G01 975 aa13.71□□□□□ -0.21
NSMCE1-214ENST00000569236 FIZ1Q96SL8 496 aa13.71□□□□□ -0.21
NSMCE1-214ENST00000569236 GAD1Q99259 594 aa13.71□□□□□ -0.21
NSMCE1-214ENST00000569236 MRPL44Q9H9J2 332 aaKnown RBP13.71□□□□□ -0.21
NSMCE1-214ENST00000569236 LMCD1Q9NZU5 365 aa13.71□□□□□ -0.21
NSMCE1-214ENST00000569236 TBX20Q9UMR3 447 aa13.71□□□□□ -0.21
NSMCE1-214ENST00000569236 MTCH2Q9Y6C9 303 aa13.71□□□□□ -0.21
NSMCE1-214ENST00000569236 FRMD3A2A2Y4 597 aa13.71□□□□□ -0.22
NSMCE1-214ENST00000569236 ARL5CA6NH57 179 aa13.71□□□□□ -0.22
NSMCE1-214ENST00000569236 SMTNL1A8MU46 457 aa13.71□□□□□ -0.22
NSMCE1-214ENST00000569236 TOM1L1O75674 476 aa13.71□□□□□ -0.22
NSMCE1-214ENST00000569236 POMCP01189 267 aa13.71□□□□□ -0.22
NSMCE1-214ENST00000569236 AFF1P51825 1210 aaKnown RBP13.71□□□□□ -0.22
NSMCE1-214ENST00000569236 GTF2BQ00403 316 aa13.71□□□□□ -0.22
NSMCE1-214ENST00000569236 NCAPHQ15003 741 aa13.71□□□□□ -0.22
NSMCE1-214ENST00000569236 HERC4Q5GLZ8 1057 aaPredicted RBP13.71□□□□□ -0.22
NSMCE1-214ENST00000569236 ZPBP2Q6X784 338 aa13.71□□□□□ -0.22
NSMCE1-214ENST00000569236 CCDC65Q8IXS2 484 aa13.71□□□□□ -0.22
NSMCE1-214ENST00000569236 THNSL1Q8IYQ7 743 aa13.71□□□□□ -0.22
NSMCE1-214ENST00000569236 MAFAQ8NHW3 353 aaPredicted RBP13.71□□□□□ -0.22
NSMCE1-214ENST00000569236 SMARCE1Q969G3 411 aa13.71□□□□□ -0.22
NSMCE1-214ENST00000569236 ZFP42Q96MM3 310 aa13.71□□□□□ -0.22
NSMCE1-214ENST00000569236 ZNF558Q96NG5 402 aa13.71□□□□□ -0.22
NSMCE1-214ENST00000569236 FAM193BQ96PV7 902 aaPredicted RBP13.71□□□□□ -0.22
NSMCE1-214ENST00000569236 TRIM9Q9C026 710 aa13.71□□□□□ -0.22
NSMCE1-214ENST00000569236 ST6GALNAC4Q9H4F1 302 aa13.71□□□□□ -0.22
NSMCE1-214ENST00000569236 PTPRHQ9HD43 1115 aa13.71□□□□□ -0.22
NSMCE1-214ENST00000569236 PANK4Q9NVE7 773 aa13.71□□□□□ -0.22
NSMCE1-214ENST00000569236 SNTG2Q9NY99 539 aa13.71□□□□□ -0.22
NSMCE1-214ENST00000569236 ANKFY1Q9P2R3 1169 aa13.71□□□□□ -0.22
NSMCE1-214ENST00000569236 PLAGL2Q9UPG8 496 aa13.71□□□□□ -0.22
NSMCE1-214ENST00000569236 PRRC2BQ5JSZ5 2229 aaKnown RBP13.7□□□□□ -0.22
NSMCE1-214ENST00000569236 HNRNPDLO14979 420 aaKnown RBP13.7□□□□□ -0.22
NSMCE1-214ENST00000569236 ZC3H11AO75152 810 aaKnown RBP eCLIP13.7□□□□□ -0.22
NSMCE1-214ENST00000569236 PRR29P0C7W0 189 aa13.7□□□□□ -0.22
NSMCE1-214ENST00000569236 PROZP22891 400 aa13.7□□□□□ -0.22
NSMCE1-214ENST00000569236 ALDH7A1P49419 539 aaKnown RBP13.7□□□□□ -0.22
NSMCE1-214ENST00000569236 TPM4P67936 248 aa13.7□□□□□ -0.22
NSMCE1-214ENST00000569236 ASIC1P78348 528 aa13.7□□□□□ -0.22
NSMCE1-214ENST00000569236 KCNT2Q6UVM3 1135 aa13.7□□□□□ -0.22
NSMCE1-214ENST00000569236 MPZL3Q6UWV2 235 aa13.7□□□□□ -0.22
NSMCE1-214ENST00000569236 ZNF720Q7Z2F6 126 aa13.7□□□□□ -0.22
NSMCE1-214ENST00000569236 ZBTB33Q86T24 672 aa13.7□□□□□ -0.22
NSMCE1-214ENST00000569236 MICALL1Q8N3F8 863 aa13.7□□□□□ -0.22
NSMCE1-214ENST00000569236 GBP3Q9H0R5 595 aa13.7□□□□□ -0.22
NSMCE1-214ENST00000569236 CDT1Q9H211 546 aa13.7□□□□□ -0.22
NSMCE1-214ENST00000569236 ALG13Q9NP73 1137 aaKnown RBP13.7□□□□□ -0.22
NSMCE1-214ENST00000569236 OLFML3Q9NRN5 406 aa13.7□□□□□ -0.22
NSMCE1-214ENST00000569236 TBC1D7Q9P0N9 293 aa13.7□□□□□ -0.22
NSMCE1-214ENST00000569236 MAN1B1Q9UKM7 699 aa13.7□□□□□ -0.22
NSMCE1-214ENST00000569236 TDRD15B5MCY1 1934 aaKnown RBP13.7□□□□□ -0.22
NSMCE1-214ENST00000569236 ZMYM2Q9UBW7 1377 aa13.69□□□□□ -0.22
NSMCE1-214ENST00000569236 PLXNA4Q9HCM2 1894 aa13.69□□□□□ -0.22
NSMCE1-214ENST00000569236 CARNS1A5YM72 827 aa13.69□□□□□ -0.22
NSMCE1-214ENST00000569236 GRM6O15303 877 aa13.69□□□□□ -0.22
NSMCE1-214ENST00000569236 INPPL1O15357 1258 aa13.69□□□□□ -0.22
NSMCE1-214ENST00000569236 RECQL4O94761 1208 aa13.69□□□□□ -0.22
NSMCE1-214ENST00000569236 SMC2O95347 1197 aa13.69□□□□□ -0.22
NSMCE1-214ENST00000569236 ITGB1P05556 798 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms