RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 MYBPC2Q14324 1141 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 GPNMBQ14956 572 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 NOLC1Q14978 699 aaKnown RBP eCLIP11.41□□□□□ -0.58
CDH3-210ENST00000569117 ZNF568Q3ZCX4 644 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 ANKRD40Q6AI12 368 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 ARMCX5Q6P1M9 558 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 LRRC55Q6ZSA7 311 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 ENOX1Q8TC92 643 aaKnown RBP11.41□□□□□ -0.58
CDH3-210ENST00000569117 LRRN4Q8WUT4 740 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 TRIM43Q96BQ3 446 aaPredicted RBP11.41□□□□□ -0.58
CDH3-210ENST00000569117 IFIH1Q9BYX4 1025 aaKnown RBP11.41□□□□□ -0.58
CDH3-210ENST00000569117 PRDM5Q9NQX1 630 aaPredicted RBP11.41□□□□□ -0.58
CDH3-210ENST00000569117 ANKFY1Q9P2R3 1169 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 PADI3Q9ULW8 664 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 ST3GAL5Q9UNP4 418 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 USP20Q9Y2K6 914 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 CITO14578 2027 aa11.41□□□□□ -0.58
CDH3-210ENST00000569117 PDCD11Q14690 1871 aaKnown RBP11.4□□□□□ -0.58
CDH3-210ENST00000569117 A0A0B4J269 797 aa11.4□□□□□ -0.58
CDH3-210ENST00000569117 KIAA0391O15091 583 aaKnown RBP11.4□□□□□ -0.58
CDH3-210ENST00000569117 CLDN3O15551 220 aa11.4□□□□□ -0.58
CDH3-210ENST00000569117 FAM189A1O60320 539 aa11.4□□□□□ -0.58
CDH3-210ENST00000569117 NR2F2P24468 414 aa11.4□□□□□ -0.58
CDH3-210ENST00000569117 ADSSP30520 456 aa11.4□□□□□ -0.58
CDH3-210ENST00000569117 CCL23P55773 120 aa11.4□□□□□ -0.58
CDH3-210ENST00000569117 STX17P56962 302 aa11.4□□□□□ -0.58
CDH3-210ENST00000569117 MCL1Q07820 350 aa11.4□□□□□ -0.58
CDH3-210ENST00000569117 IQCB1Q15051 598 aa11.4□□□□□ -0.58
CDH3-210ENST00000569117 DCAF4L1Q3SXM0 396 aa11.4□□□□□ -0.58
CDH3-210ENST00000569117 PLEKHG4Q58EX7 1191 aa11.4□□□□□ -0.58
CDH3-210ENST00000569117 SLFN12LQ6IEE8 588 aa11.4□□□□□ -0.58
CDH3-210ENST00000569117 SLC27A1Q6PCB7 646 aa11.4□□□□□ -0.58
CDH3-210ENST00000569117 APBB1IPQ7Z5R6 666 aaPredicted RBP11.4□□□□□ -0.58
CDH3-210ENST00000569117 DHX40Q8IX18 779 aaKnown RBP11.4□□□□□ -0.58
CDH3-210ENST00000569117 C7orf61Q8IZ16 206 aa11.4□□□□□ -0.58
CDH3-210ENST00000569117 AOPEPQ8N6M6 819 aa11.4□□□□□ -0.58
CDH3-210ENST00000569117 APBB2Q92870 758 aa11.4□□□□□ -0.58
CDH3-210ENST00000569117 SCLYQ96I15 445 aa11.4□□□□□ -0.58
CDH3-210ENST00000569117 CPB2Q96IY4 423 aa11.4□□□□□ -0.58
CDH3-210ENST00000569117 DUSP9Q99956 384 aaKnown RBP11.4□□□□□ -0.58
CDH3-210ENST00000569117 ADPGKQ9BRR6 497 aa11.4□□□□□ -0.58
CDH3-210ENST00000569117 CBWD1Q9BRT8 395 aa11.4□□□□□ -0.58
CDH3-210ENST00000569117 HAPLN2Q9GZV7 340 aa11.4□□□□□ -0.58
CDH3-210ENST00000569117 CDT1Q9H211 546 aa11.4□□□□□ -0.58
CDH3-210ENST00000569117 CBX8Q9HC52 389 aa11.4□□□□□ -0.58
CDH3-210ENST00000569117 CHST12Q9NRB3 414 aa11.4□□□□□ -0.58
CDH3-210ENST00000569117 DMAC2Q9NW81 257 aa11.4□□□□□ -0.58
CDH3-210ENST00000569117 SLC16A3O15427 465 aaKnown RBP11.39□□□□□ -0.59
CDH3-210ENST00000569117 PFKMP08237 780 aa11.39□□□□□ -0.59
CDH3-210ENST00000569117 MCF2P10911 925 aa11.39□□□□□ -0.59
CDH3-210ENST00000569117 RAG1P15918 1043 aa11.39□□□□□ -0.59
CDH3-210ENST00000569117 ITGB8P26012 769 aa11.39□□□□□ -0.59
CDH3-210ENST00000569117 RPL13P26373 211 aaKnown RBP11.39□□□□□ -0.59
CDH3-210ENST00000569117 FKBP3Q00688 224 aaKnown RBP11.39□□□□□ -0.59
CDH3-210ENST00000569117 NFX1Q12986 1120 aaKnown RBP11.39□□□□□ -0.59
CDH3-210ENST00000569117 HSP90AA2PQ14568 343 aaPredicted RBP11.39□□□□□ -0.59
CDH3-210ENST00000569117 DSC3Q14574 896 aa11.39□□□□□ -0.59
CDH3-210ENST00000569117 NCAPHQ15003 741 aa11.39□□□□□ -0.59
CDH3-210ENST00000569117 SPATA1Q5VX52 437 aa11.39□□□□□ -0.59
CDH3-210ENST00000569117 EEF1DP3Q658K8 133 aa11.39□□□□□ -0.59
CDH3-210ENST00000569117 MFSD5Q6N075 450 aa11.39□□□□□ -0.59
CDH3-210ENST00000569117 CSGALNACT2Q8N6G5 542 aa11.39□□□□□ -0.59
CDH3-210ENST00000569117 POMGNT1Q8WZA1 660 aa11.39□□□□□ -0.59
CDH3-210ENST00000569117 TSC1Q92574 1164 aa11.39□□□□□ -0.59
CDH3-210ENST00000569117 HLA-CQ95604 372 aa11.39□□□□□ -0.59
CDH3-210ENST00000569117 CEP63Q96MT8 703 aa11.39□□□□□ -0.59
CDH3-210ENST00000569117 MSTO1Q9BUK6 570 aa11.39□□□□□ -0.59
CDH3-210ENST00000569117 FTHL17Q9BXU8 183 aa11.39□□□□□ -0.59
CDH3-210ENST00000569117 TMX1Q9H3N1 280 aa11.39□□□□□ -0.59
CDH3-210ENST00000569117 HSPBP1Q9NZL4 362 aa11.39□□□□□ -0.59
CDH3-210ENST00000569117 PRKAG2Q9UGJ0 569 aa11.39□□□□□ -0.59
CDH3-210ENST00000569117 NFE2L3Q9Y4A8 694 aa11.39□□□□□ -0.59
CDH3-210ENST00000569117 CETN3O15182 167 aa11.38□□□□□ -0.59
CDH3-210ENST00000569117 CLIC2O15247 247 aa11.38□□□□□ -0.59
CDH3-210ENST00000569117 OGTO15294 1046 aa11.38□□□□□ -0.59
CDH3-210ENST00000569117 MGEA5O60502 916 aa11.38□□□□□ -0.59
CDH3-210ENST00000569117 RAB27AP51159 221 aa11.38□□□□□ -0.59
CDH3-210ENST00000569117 CYP2J2P51589 502 aa11.38□□□□□ -0.59
CDH3-210ENST00000569117 KYAT1Q16773 422 aa11.38□□□□□ -0.59
CDH3-210ENST00000569117 UBXN11Q5T124 520 aa11.38□□□□□ -0.59
CDH3-210ENST00000569117 TWF2Q6IBS0 349 aaKnown RBP11.38□□□□□ -0.59
CDH3-210ENST00000569117 CDR2LQ86X02 465 aaPredicted RBP11.38□□□□□ -0.59
CDH3-210ENST00000569117 GAS2L3Q86XJ1 694 aa11.38□□□□□ -0.59
CDH3-210ENST00000569117 GPD1LQ8N335 351 aa11.38□□□□□ -0.59
CDH3-210ENST00000569117 TMEM199Q8N511 208 aa11.38□□□□□ -0.59
CDH3-210ENST00000569117 XXYLT1Q8NBI6 393 aa11.38□□□□□ -0.59
CDH3-210ENST00000569117 NOC3LQ8WTT2 800 aaKnown RBP11.38□□□□□ -0.59
CDH3-210ENST00000569117 LINC01599Q8WXQ3 324 aa11.38□□□□□ -0.59
CDH3-210ENST00000569117 SEPT8Q92599 483 aa11.38□□□□□ -0.59
CDH3-210ENST00000569117 VWCEQ96DN2 955 aa11.38□□□□□ -0.59
CDH3-210ENST00000569117 ZBTB45Q96K62 511 aaPredicted RBP11.38□□□□□ -0.59
CDH3-210ENST00000569117 FBXL18Q96ME1 805 aa11.38□□□□□ -0.59
CDH3-210ENST00000569117 MKNK1Q9BUB5 465 aa11.38□□□□□ -0.59
CDH3-210ENST00000569117 THAP9Q9H5L6 903 aa11.38□□□□□ -0.59
CDH3-210ENST00000569117 AGO2Q9UKV8 859 aaKnown RBP11.38□□□□□ -0.59
CDH3-210ENST00000569117 PTPRSQ13332 1948 aa11.37□□□□□ -0.59
CDH3-210ENST00000569117 SMTNL1A8MU46 457 aa11.37□□□□□ -0.59
CDH3-210ENST00000569117 BECN2A8MW95 431 aa11.37□□□□□ -0.59
CDH3-210ENST00000569117 MAPK13O15264 365 aa11.37□□□□□ -0.59
CDH3-210ENST00000569117 EXTL3O43909 919 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms