RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 GLUD2P49448 558 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 ITIH3Q06033 890 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 DMP1Q13316 513 aaPredicted RBP8.61□□□□□ -1.03
CDH3-209ENST00000569080 TUSC3Q13454 348 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 SF3A1Q15459 793 aaKnown RBP8.61□□□□□ -1.03
CDH3-209ENST00000569080 ARSHQ5FYA8 562 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 XKR4Q5GH76 650 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 TMEM31Q5JXX7 168 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 ATF7IP2Q5U623 682 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 KIAA0319Q5VV43 1072 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 KIAA1841Q6NSI8 718 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 KANK3Q6NY19 840 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 CABP7Q86V35 215 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 GPR65Q8IYL9 337 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 C12orf76Q8N812 135 aaPredicted RBP8.61□□□□□ -1.03
CDH3-209ENST00000569080 TMEM161BQ8NDZ6 487 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 SPIRE2Q8WWL2 714 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 RABGGTAQ92696 567 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 INTS4Q96HW7 963 aaKnown RBP8.61□□□□□ -1.03
CDH3-209ENST00000569080 B3GALT6Q96L58 329 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 FAM193BQ96PV7 902 aaPredicted RBP8.61□□□□□ -1.03
CDH3-209ENST00000569080 PPP1R10Q96QC0 940 aaKnown RBP8.61□□□□□ -1.03
CDH3-209ENST00000569080 ACO2Q99798 780 aaKnown RBP8.61□□□□□ -1.03
CDH3-209ENST00000569080 NTPCRQ9BSD7 190 aaKnown RBP8.61□□□□□ -1.03
CDH3-209ENST00000569080 TIPINQ9BVW5 301 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 NT5C3AQ9H0P0 336 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 TMEM134Q9H6X4 195 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 C17orf75Q9HAS0 396 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 RXFP1Q9HBX9 757 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 PARP2Q9UGN5 583 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 ADAM28Q9UKQ2 775 aa8.61□□□□□ -1.03
CDH3-209ENST00000569080 MTCL1Q9Y4B5 1905 aaKnown RBP8.6□□□□□ -1.03
CDH3-209ENST00000569080 KMT2EQ8IZD2 1858 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 NPHP3-ACAD11A0A0J9YXS1 232 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 CASTOR2A6NHX0 329 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 SFI1A8K8P3 1242 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 PRR33A8MZF0 331 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 C2CD2LO14523 706 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 SLC16A4O15374 487 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 BMP15O95972 392 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 WEE2P0C1S8 567 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 PLA2G4BP0C869 781 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 MAPTP10636 758 aaKnown RBP8.6□□□□□ -1.03
CDH3-209ENST00000569080 PLS3P13797 630 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 LIG1P18858 919 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 PLCG1P19174 1290 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 SYT1P21579 422 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 IGFBP6P24592 240 aaPredicted RBP8.6□□□□□ -1.03
CDH3-209ENST00000569080 CA8P35219 290 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 GRM5P41594 1212 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 ZNF131P52739 623 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 CACNB1Q02641 598 aaPredicted RBP8.6□□□□□ -1.03
CDH3-209ENST00000569080 RAD51AP2Q09MP3 1159 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 HSP90AA2PQ14568 343 aaPredicted RBP8.6□□□□□ -1.03
CDH3-209ENST00000569080 ZNF568Q3ZCX4 644 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 TPRNQ4KMQ1 711 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 GLRA4Q5JXX5 417 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 RTP2Q5QGT7 225 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 RARS2Q5T160 578 aaKnown RBP8.6□□□□□ -1.03
CDH3-209ENST00000569080 FAM173BQ6P4H8 233 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 CD300LGQ6UXG3 332 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 FBXL18Q96ME1 805 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 NECTIN4Q96NY8 510 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 FIZ1Q96SL8 496 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 PLIN2Q99541 437 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 ADPGKQ9BRR6 497 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 TARS2Q9BW92 718 aaKnown RBP8.6□□□□□ -1.03
CDH3-209ENST00000569080 MRPL4Q9BYD3 311 aaKnown RBP8.6□□□□□ -1.03
CDH3-209ENST00000569080 HAPLN2Q9GZV7 340 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 SFXN1Q9H9B4 322 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 KMT5AQ9NQR1 393 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 MRPL17Q9NRX2 175 aaKnown RBP8.6□□□□□ -1.03
CDH3-209ENST00000569080 KCND2Q9NZV8 630 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 DAXXQ9UER7 740 aaPredicted RBP8.6□□□□□ -1.03
CDH3-209ENST00000569080 FBXO2Q9UK22 296 aaPredicted RBP8.6□□□□□ -1.03
CDH3-209ENST00000569080 MTMR6Q9Y217 621 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 GDAQ9Y2T3 454 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 CLIC4Q9Y696 253 aa8.6□□□□□ -1.03
CDH3-209ENST00000569080 MORC2Q9Y6X9 1032 aaPredicted RBP8.6□□□□□ -1.03
CDH3-209ENST00000569080 SF3B1O75533 1304 aaKnown RBP eCLIP8.59□□□□□ -1.03
CDH3-209ENST00000569080 DOCK8Q8NF50 2099 aa8.59□□□□□ -1.03
CDH3-209ENST00000569080 CCDC169A6NNP5 214 aa8.59□□□□□ -1.03
CDH3-209ENST00000569080 C2CD4DB7Z1M9 353 aa8.59□□□□□ -1.03
CDH3-209ENST00000569080 TMEM189-UBE2V1I3L0A0 370 aa8.59□□□□□ -1.03
CDH3-209ENST00000569080 K7ELQ4 463 aaPredicted RBP8.59□□□□□ -1.03
CDH3-209ENST00000569080 K7ERI5 159 aa8.59□□□□□ -1.03
CDH3-209ENST00000569080 THP07101 528 aa8.59□□□□□ -1.03
CDH3-209ENST00000569080 PDCP20941 246 aa8.59□□□□□ -1.03
CDH3-209ENST00000569080 LONP1P36776 959 aaKnown RBP8.59□□□□□ -1.03
CDH3-209ENST00000569080 NCKAP1LP55160 1127 aa8.59□□□□□ -1.03
CDH3-209ENST00000569080 SOX4Q06945 474 aaPredicted RBP8.59□□□□□ -1.03
CDH3-209ENST00000569080 BMS1Q14692 1282 aaKnown RBP8.59□□□□□ -1.03
CDH3-209ENST00000569080 KARSQ15046 597 aaKnown RBP8.59□□□□□ -1.03
CDH3-209ENST00000569080 ZRSR1Q15695 479 aaKnown RBP8.59□□□□□ -1.03
CDH3-209ENST00000569080 ALKAL1Q6UXT8 129 aa8.59□□□□□ -1.03
CDH3-209ENST00000569080 USP49Q70CQ1 688 aa8.59□□□□□ -1.03
CDH3-209ENST00000569080 PPFIBP1Q86W92 1011 aa8.59□□□□□ -1.03
CDH3-209ENST00000569080 C3orf58Q8NDZ4 430 aa8.59□□□□□ -1.03
CDH3-209ENST00000569080 CMASQ8NFW8 434 aaPredicted RBP8.59□□□□□ -1.03
CDH3-209ENST00000569080 HASPINQ8TF76 798 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms