RNA–Protein interactions for RNA: ENST00000569005.5

EIF3C-213, Transcript of eukaryotic translation initiation factor 3 subunit C, human

TSL 5

Gene EIF3C, Length 610 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF3C-213	ENST00000569005	MCPH1	Q8NEM0	835 aa		11.79	□□□□□ -0.52
EIF3C-213	ENST00000569005	KIF2C	Q99661	725 aa		11.79	□□□□□ -0.52
EIF3C-213	ENST00000569005	COLEC11	Q9BWP8	271 aa		11.79	□□□□□ -0.52
EIF3C-213	ENST00000569005	TRIM6	Q9C030	488 aa	Predicted RBP	11.79	□□□□□ -0.52
EIF3C-213	ENST00000569005	MFSD1	Q9H3U5	465 aa		11.79	□□□□□ -0.52
EIF3C-213	ENST00000569005	KCNK12	Q9HB15	430 aa		11.79	□□□□□ -0.52
EIF3C-213	ENST00000569005	WDR6	Q9NNW5	1121 aa	Known RBP	11.79	□□□□□ -0.52
EIF3C-213	ENST00000569005	PRMT7	Q9NVM4	692 aa	Predicted RBP	11.79	□□□□□ -0.52
EIF3C-213	ENST00000569005	ADAM28	Q9UKQ2	775 aa		11.79	□□□□□ -0.52
EIF3C-213	ENST00000569005	SSX2IP	Q9Y2D8	614 aa		11.79	□□□□□ -0.52
EIF3C-213	ENST00000569005	USP20	Q9Y2K6	914 aa		11.79	□□□□□ -0.52
EIF3C-213	ENST00000569005	VWA8	A3KMH1	1905 aa		11.79	□□□□□ -0.52
EIF3C-213	ENST00000569005	CACNA1A	O00555	2505 aa		11.78	□□□□□ -0.52
EIF3C-213	ENST00000569005	OR52Z1	P0C646	297 aa		11.78	□□□□□ -0.52
EIF3C-213	ENST00000569005	RPL17	P18621	184 aa	Known RBP	11.78	□□□□□ -0.52
EIF3C-213	ENST00000569005	CYP11B2	P19099	503 aa		11.78	□□□□□ -0.52
EIF3C-213	ENST00000569005	ATP2B1	P20020	1258 aa		11.78	□□□□□ -0.52
EIF3C-213	ENST00000569005	RPA1	P27694	616 aa		11.78	□□□□□ -0.52
EIF3C-213	ENST00000569005	CLCN5	P51795	746 aa		11.78	□□□□□ -0.52
EIF3C-213	ENST00000569005	ORC2	Q13416	577 aa	Predicted RBP	11.78	□□□□□ -0.52
EIF3C-213	ENST00000569005	USP41	Q3LFD5	358 aa		11.78	□□□□□ -0.52
EIF3C-213	ENST00000569005	RTP2	Q5QGT7	225 aa		11.78	□□□□□ -0.52
EIF3C-213	ENST00000569005	PADI6	Q6TGC4	694 aa		11.78	□□□□□ -0.52
EIF3C-213	ENST00000569005	CYP26C1	Q6V0L0	522 aa		11.78	□□□□□ -0.52
EIF3C-213	ENST00000569005	CCDC83	Q8IWF9	413 aa		11.78	□□□□□ -0.52
EIF3C-213	ENST00000569005	FBXO18	Q8NFZ0	1043 aa		11.78	□□□□□ -0.52
EIF3C-213	ENST00000569005	HDAC7	Q8WUI4	952 aa		11.78	□□□□□ -0.52
EIF3C-213	ENST00000569005	ACSF2	Q96CM8	615 aa	Predicted RBP	11.78	□□□□□ -0.52
EIF3C-213	ENST00000569005	CCDC43	Q96MW1	224 aa	Known RBP	11.78	□□□□□ -0.52
EIF3C-213	ENST00000569005	NACC1	Q96RE7	527 aa		11.78	□□□□□ -0.52
EIF3C-213	ENST00000569005	LLPH	Q9BRT6	129 aa	Known RBP	11.78	□□□□□ -0.52
EIF3C-213	ENST00000569005	NT5C3A	Q9H0P0	336 aa		11.78	□□□□□ -0.52
EIF3C-213	ENST00000569005	IRF2BPL	Q9H1B7	796 aa		11.78	□□□□□ -0.52
EIF3C-213	ENST00000569005	FOXP1	Q9H334	677 aa	Predicted RBP	11.78	□□□□□ -0.52
EIF3C-213	ENST00000569005	FNIP2	Q9P278	1114 aa		11.78	□□□□□ -0.52
EIF3C-213	ENST00000569005	EPS15L1	Q9UBC2	864 aa		11.78	□□□□□ -0.52
EIF3C-213	ENST00000569005	DUSP12	Q9UNI6	340 aa		11.78	□□□□□ -0.52
EIF3C-213	ENST00000569005	LIMCH1	Q9UPQ0	1083 aa		11.78	□□□□□ -0.52
EIF3C-213	ENST00000569005	CLUH	O75153	1309 aa		11.78	□□□□□ -0.52
EIF3C-213	ENST00000569005	SPDYE4	A6NLX3	237 aa		11.77	□□□□□ -0.53
EIF3C-213	ENST00000569005	KIF4A	O95239	1232 aa		11.77	□□□□□ -0.53
EIF3C-213	ENST00000569005	IGFBP6	P24592	240 aa	Predicted RBP	11.77	□□□□□ -0.53
EIF3C-213	ENST00000569005	FXR2	P51116	673 aa	Known RBP eCLIP	11.77	□□□□□ -0.53
EIF3C-213	ENST00000569005	TUSC3	Q13454	348 aa		11.77	□□□□□ -0.53
EIF3C-213	ENST00000569005	TDG	Q13569	410 aa		11.77	□□□□□ -0.53
EIF3C-213	ENST00000569005	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.77	□□□□□ -0.53
EIF3C-213	ENST00000569005	ZNF174	Q15697	407 aa		11.77	□□□□□ -0.53
EIF3C-213	ENST00000569005	ERICH6B	Q5W0A0	696 aa		11.77	□□□□□ -0.53
EIF3C-213	ENST00000569005	EEF1DP3	Q658K8	133 aa		11.77	□□□□□ -0.53
EIF3C-213	ENST00000569005	PALB2	Q86YC2	1186 aa		11.77	□□□□□ -0.53
EIF3C-213	ENST00000569005	NOSTRIN	Q8IVI9	506 aa		11.77	□□□□□ -0.53
EIF3C-213	ENST00000569005	HACE1	Q8IYU2	909 aa		11.77	□□□□□ -0.53
EIF3C-213	ENST00000569005	SIX5	Q8N196	739 aa		11.77	□□□□□ -0.53
EIF3C-213	ENST00000569005	MYADM	Q96S97	322 aa		11.77	□□□□□ -0.53
EIF3C-213	ENST00000569005	KIFC3	Q9BVG8	833 aa		11.77	□□□□□ -0.53
EIF3C-213	ENST00000569005	PLEKHA4	Q9H4M7	779 aa		11.77	□□□□□ -0.53
EIF3C-213	ENST00000569005	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	11.77	□□□□□ -0.53
EIF3C-213	ENST00000569005	SNTG2	Q9NY99	539 aa		11.77	□□□□□ -0.53
EIF3C-213	ENST00000569005	PARP2	Q9UGN5	583 aa		11.77	□□□□□ -0.53
EIF3C-213	ENST00000569005	TRIP11	Q15643	1979 aa		11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	KRBA1	A5PL33	1030 aa		11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	ACKR2	O00590	384 aa		11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	N4BP3	O15049	544 aa		11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	NR1I2	O75469	434 aa		11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	RECQL4	O94761	1208 aa		11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	PRKCB	P05771	671 aa		11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	CFH	P08603	1231 aa		11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	AOC1	P19801	751 aa		11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	MUT	P22033	750 aa		11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	NAMPT	P43490	491 aa		11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	TOB1	P50616	345 aa	Predicted RBP	11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	PRPF4B	Q13523	1007 aa	Known RBP	11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	NBR1	Q14596	966 aa		11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	SAFB	Q15424	915 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	MAPK6	Q16659	721 aa		11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	TTC38	Q5R3I4	469 aa		11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	PRSS55	Q6UWB4	352 aa	Predicted RBP	11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	CD300LG	Q6UXG3	332 aa		11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	ZBTB8OS	Q8IWT0	167 aa		11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	LNX1	Q8TBB1	728 aa	Predicted RBP	11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	HASPIN	Q8TF76	798 aa		11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	RIN2	Q8WYP3	895 aa	Predicted RBP	11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	SMG7	Q92540	1137 aa	Known RBP	11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	C8orf76	Q96K31	380 aa		11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	CLSTN3	Q9BQT9	956 aa		11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	PRKD2	Q9BZL6	878 aa		11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	C2orf40	Q9H1Z8	148 aa		11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	POLD4	Q9HCU8	107 aa		11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	ZDHHC7	Q9NXF8	308 aa		11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	IGSF9	Q9P2J2	1179 aa		11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	DPP7	Q9UHL4	492 aa		11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	FBXW11	Q9UKB1	542 aa		11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	SF3B1	O75533	1304 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
EIF3C-213	ENST00000569005	CASTOR2	A6NHX0	329 aa		11.75	□□□□□ -0.53
EIF3C-213	ENST00000569005	ADAM12	O43184	909 aa		11.75	□□□□□ -0.53
EIF3C-213	ENST00000569005	ZMYND10	O75800	440 aa		11.75	□□□□□ -0.53
EIF3C-213	ENST00000569005	U2AF2	P26368	475 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
EIF3C-213	ENST00000569005	CREM	Q03060	361 aa		11.75	□□□□□ -0.53
EIF3C-213	ENST00000569005	ANGPT1	Q15389	498 aa		11.75	□□□□□ -0.53
EIF3C-213	ENST00000569005	NT5DC1	Q5TFE4	455 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms