RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 VAV3Q9UKW4 847 aa13.89□□□□□ -0.19
SNX29-207ENST00000568949 SF3B1O75533 1304 aaKnown RBP eCLIP13.89□□□□□ -0.194e-7■■■■■ 133.7
SNX29-207ENST00000568949 FRYLO94915 3013 aa13.88□□□□□ -0.19
SNX29-207ENST00000568949 M0R2N6 131 aa13.88□□□□□ -0.19
SNX29-207ENST00000568949 NCAM2O15394 837 aa13.88□□□□□ -0.19
SNX29-207ENST00000568949 XYLBO75191 536 aa13.88□□□□□ -0.19
SNX29-207ENST00000568949 TADA2AO75478 443 aa13.88□□□□□ -0.19
SNX29-207ENST00000568949 C8AP07357 584 aa13.88□□□□□ -0.19
SNX29-207ENST00000568949 TGM1P22735 817 aa13.88□□□□□ -0.19
SNX29-207ENST00000568949 NTHL1P78549 312 aa13.88□□□□□ -0.19
SNX29-207ENST00000568949 RTP2Q5QGT7 225 aa13.88□□□□□ -0.19
SNX29-207ENST00000568949 PPM1LQ5SGD2 360 aa13.88□□□□□ -0.19
SNX29-207ENST00000568949 PRSS55Q6UWB4 352 aaPredicted RBP13.88□□□□□ -0.19
SNX29-207ENST00000568949 FAM177A1Q8N128 213 aaPredicted RBP13.88□□□□□ -0.19
SNX29-207ENST00000568949 DAGLBQ8NCG7 672 aa13.88□□□□□ -0.19
SNX29-207ENST00000568949 PIK3R5Q8WYR1 880 aa13.88□□□□□ -0.19
SNX29-207ENST00000568949 KCNB2Q92953 911 aa13.88□□□□□ -0.19
SNX29-207ENST00000568949 CPB2Q96IY4 423 aa13.88□□□□□ -0.19
SNX29-207ENST00000568949 PHF20Q9BVI0 1012 aa13.88□□□□□ -0.19
SNX29-207ENST00000568949 APOL6Q9BWW8 343 aa13.88□□□□□ -0.19
SNX29-207ENST00000568949 AGXT2Q9BYV1 514 aa13.88□□□□□ -0.19
SNX29-207ENST00000568949 NXF3Q9H4D5 531 aaKnown RBP13.88□□□□□ -0.19
SNX29-207ENST00000568949 PRMT8Q9NR22 394 aaPredicted RBP13.88□□□□□ -0.19
SNX29-207ENST00000568949 WRAP73Q9P2S5 460 aaPredicted RBP13.88□□□□□ -0.19
SNX29-207ENST00000568949 KCNH3Q9ULD8 1083 aa13.88□□□□□ -0.19
SNX29-207ENST00000568949 F5P12259 2224 aa13.88□□□□□ -0.19
SNX29-207ENST00000568949 NOTCH4Q99466 2003 aa13.87□□□□□ -0.19
SNX29-207ENST00000568949 INO80B-WBP1J3KQ70 363 aa13.87□□□□□ -0.19
SNX29-207ENST00000568949 CPA1P15085 419 aa13.87□□□□□ -0.19
SNX29-207ENST00000568949 YWHABP31946 246 aaKnown RBP13.87□□□□□ -0.19
SNX29-207ENST00000568949 TFDP1Q14186 410 aa13.87□□□□□ -0.19
SNX29-207ENST00000568949 HSP90AA2PQ14568 343 aaPredicted RBP13.87□□□□□ -0.19
SNX29-207ENST00000568949 EPHA7Q15375 998 aa13.87□□□□□ -0.19
SNX29-207ENST00000568949 AMHR2Q16671 573 aa13.87□□□□□ -0.19
SNX29-207ENST00000568949 BMP2KLQ5H9B9 411 aa13.87□□□□□ -0.19
SNX29-207ENST00000568949 GALNT17Q6IS24 598 aa13.87□□□□□ -0.19
SNX29-207ENST00000568949 BLOC1S2Q6QNY1 142 aa13.87□□□□□ -0.19
SNX29-207ENST00000568949 TRIM22Q8IYM9 498 aa13.87□□□□□ -0.19
SNX29-207ENST00000568949 ITFG1Q8TB96 612 aa13.87□□□□□ -0.19
SNX29-207ENST00000568949 MTRQ99707 1265 aa13.87□□□□□ -0.19
SNX29-207ENST00000568949 CLSTN3Q9BQT9 956 aa13.87□□□□□ -0.19
SNX29-207ENST00000568949 TTPALQ9BTX7 342 aa13.87□□□□□ -0.19
SNX29-207ENST00000568949 SLKQ9H2G2 1235 aaPredicted RBP13.87□□□□□ -0.19
SNX29-207ENST00000568949 KCNMB3Q9NPA1 279 aa13.87□□□□□ -0.19
SNX29-207ENST00000568949 BMP2KQ9NSY1 1161 aaPredicted RBP13.87□□□□□ -0.19
SNX29-207ENST00000568949 GMEB2Q9UKD1 530 aa13.87□□□□□ -0.19
SNX29-207ENST00000568949 COL4A3Q01955 1670 aa13.87□□□□□ -0.19
SNX29-207ENST00000568949 ARID2Q68CP9 1835 aa13.86□□□□□ -0.19
SNX29-207ENST00000568949 SLC37A4O43826 429 aa13.86□□□□□ -0.19
SNX29-207ENST00000568949 ADRB1P08588 477 aa13.86□□□□□ -0.19
SNX29-207ENST00000568949 ARF4P18085 180 aaPredicted RBP13.86□□□□□ -0.19
SNX29-207ENST00000568949 CD72P21854 359 aa13.86□□□□□ -0.19
SNX29-207ENST00000568949 AKAP5P24588 427 aa13.86□□□□□ -0.19
SNX29-207ENST00000568949 TARSP26639 723 aaKnown RBP13.86□□□□□ -0.19
SNX29-207ENST00000568949 EVCP57679 992 aa13.86□□□□□ -0.19
SNX29-207ENST00000568949 MBTD1Q05BQ5 628 aa13.86□□□□□ -0.19
SNX29-207ENST00000568949 UVSSAQ2YD98 709 aa13.86□□□□□ -0.19
SNX29-207ENST00000568949 XKR9Q5GH70 373 aa13.86□□□□□ -0.19
SNX29-207ENST00000568949 PDXDC1Q6P996 788 aa13.86□□□□□ -0.19
SNX29-207ENST00000568949 RTL10Q7L3V2 364 aa13.86□□□□□ -0.19
SNX29-207ENST00000568949 KRT25Q7Z3Z0 450 aa13.86□□□□□ -0.19
SNX29-207ENST00000568949 NPAS3Q8IXF0 933 aa13.86□□□□□ -0.19
SNX29-207ENST00000568949 LNX1Q8TBB1 728 aaPredicted RBP13.86□□□□□ -0.19
SNX29-207ENST00000568949 LXNQ9BS40 222 aa13.86□□□□□ -0.19
SNX29-207ENST00000568949 NFKBIZQ9BYH8 718 aa13.86□□□□□ -0.19
SNX29-207ENST00000568949 XPNPEP1Q9NQW7 623 aa13.86□□□□□ -0.19
SNX29-207ENST00000568949 USP18Q9UMW8 372 aa13.86□□□□□ -0.19
SNX29-207ENST00000568949 POLIQ9UNA4 740 aa13.86□□□□□ -0.19
SNX29-207ENST00000568949 MRPS17Q9Y2R5 130 aaKnown RBP13.86□□□□□ -0.19
SNX29-207ENST00000568949 DCDC2BA2VCK2 349 aa13.85□□□□□ -0.19
SNX29-207ENST00000568949 TBX3O15119 743 aa13.85□□□□□ -0.19
SNX29-207ENST00000568949 CCL16O15467 120 aa13.85□□□□□ -0.19
SNX29-207ENST00000568949 ECI2O75521 394 aa13.85□□□□□ -0.19
SNX29-207ENST00000568949 GCFC2P16383 781 aaKnown RBP13.85□□□□□ -0.19
SNX29-207ENST00000568949 PDIA3P30101 505 aaKnown RBP13.85□□□□□ -0.19
SNX29-207ENST00000568949 ADCY1Q08828 1119 aa13.85□□□□□ -0.19
SNX29-207ENST00000568949 ELAVL2Q12926 359 aaKnown RBP13.85□□□□□ -0.19
SNX29-207ENST00000568949 TUSC3Q13454 348 aa13.85□□□□□ -0.19
SNX29-207ENST00000568949 FZD5Q13467 585 aa13.85□□□□□ -0.19
SNX29-207ENST00000568949 NPY5RQ15761 445 aa13.85□□□□□ -0.19
SNX29-207ENST00000568949 PSMD5Q16401 504 aa13.85□□□□□ -0.19
SNX29-207ENST00000568949 ST3GAL2Q16842 350 aa13.85□□□□□ -0.19
SNX29-207ENST00000568949 INF2Q27J81 1249 aa13.85□□□□□ -0.19
SNX29-207ENST00000568949 FAM171A1Q5VUB5 890 aa13.85□□□□□ -0.19
SNX29-207ENST00000568949 PPP4R3AQ6IN85 833 aa13.85□□□□□ -0.19
SNX29-207ENST00000568949 SLC27A1Q6PCB7 646 aa13.85□□□□□ -0.19
SNX29-207ENST00000568949 ZNF852Q6ZMS4 543 aa13.85□□□□□ -0.19
SNX29-207ENST00000568949 MAMSTRQ6ZN01 415 aa13.85□□□□□ -0.19
SNX29-207ENST00000568949 TPRG1Q6ZUI0 275 aa13.85□□□□□ -0.19
SNX29-207ENST00000568949 RABGGTAQ92696 567 aa13.85□□□□□ -0.19
SNX29-207ENST00000568949 JAKMIP1Q96N16 626 aaKnown RBP13.85□□□□□ -0.19
SNX29-207ENST00000568949 KXD1Q9BQD3 176 aa13.85□□□□□ -0.19
SNX29-207ENST00000568949 ZSWIM4Q9H7M6 989 aa13.85□□□□□ -0.19
SNX29-207ENST00000568949 PARP2Q9UGN5 583 aa13.85□□□□□ -0.19
SNX29-207ENST00000568949 CHD8Q9HCK8 2581 aa13.84□□□□□ -0.19
SNX29-207ENST00000568949 A0A1B0GUA9 196 aa13.84□□□□□ -0.19
SNX29-207ENST00000568949 DEXIO95424 95 aa13.84□□□□□ -0.19
SNX29-207ENST00000568949 NPTXRO95502 500 aa13.84□□□□□ -0.19
SNX29-207ENST00000568949 RPS6KB1P23443 525 aa13.84□□□□□ -0.19
SNX29-207ENST00000568949 NRLP54845 237 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms