RNA–Protein interactions for RNA: ENST00000568896.1

SYNGR3-205, Transcript of synaptogyrin 3, humanhuman

TSL 5

Gene SYNGR3, Length 533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-205ENST00000568896 PDZD7Q9H5P4 517 aa20.13■□□□□ 0.81
SYNGR3-205ENST00000568896 TMEM134Q9H6X4 195 aa20.13■□□□□ 0.81
SYNGR3-205ENST00000568896 LARSQ9P2J5 1176 aaKnown RBP20.13■□□□□ 0.81
SYNGR3-205ENST00000568896 IPPQ9Y573 584 aa20.13■□□□□ 0.81
SYNGR3-205ENST00000568896 MYMKA6NI61 221 aa20.12■□□□□ 0.81
SYNGR3-205ENST00000568896 TBCAO75347 108 aaKnown RBP20.12■□□□□ 0.81
SYNGR3-205ENST00000568896 NPTXRO95502 500 aa20.12■□□□□ 0.81
SYNGR3-205ENST00000568896 ANP32AP39687 249 aaKnown RBP20.12■□□□□ 0.81
SYNGR3-205ENST00000568896 TMEM132AQ24JP5 1023 aa20.12■□□□□ 0.81
SYNGR3-205ENST00000568896 NT5DC1Q5TFE4 455 aa20.12■□□□□ 0.81
SYNGR3-205ENST00000568896 TMC7Q7Z402 723 aa20.12■□□□□ 0.81
SYNGR3-205ENST00000568896 LRRC43Q8N309 656 aa20.12■□□□□ 0.81
SYNGR3-205ENST00000568896 TMEM161BQ8NDZ6 487 aa20.12■□□□□ 0.81
SYNGR3-205ENST00000568896 CNNM3Q8NE01 707 aa20.12■□□□□ 0.81
SYNGR3-205ENST00000568896 DHX58Q96C10 678 aa20.12■□□□□ 0.81
SYNGR3-205ENST00000568896 PARVGQ9HBI0 331 aa20.12■□□□□ 0.81
SYNGR3-205ENST00000568896 NGRNQ9NPE2 291 aaKnown RBP20.12■□□□□ 0.81
SYNGR3-205ENST00000568896 N4BP3O15049 544 aa20.11■□□□□ 0.81
SYNGR3-205ENST00000568896 SMTNP53814 917 aa20.11■□□□□ 0.81
SYNGR3-205ENST00000568896 NCKAP1LP55160 1127 aa20.11■□□□□ 0.81
SYNGR3-205ENST00000568896 SIGLEC14Q08ET2 396 aa20.11■□□□□ 0.81
SYNGR3-205ENST00000568896 EEF1DP3Q658K8 133 aa20.11■□□□□ 0.81
SYNGR3-205ENST00000568896 GLB1LQ6UWU2 654 aa20.11■□□□□ 0.81
SYNGR3-205ENST00000568896 DYMQ7RTS9 669 aa20.11■□□□□ 0.81
SYNGR3-205ENST00000568896 SUGP1Q8IWZ8 645 aaKnown RBP20.11■□□□□ 0.81
SYNGR3-205ENST00000568896 DDX12PQ92771 950 aa20.11■□□□□ 0.81
SYNGR3-205ENST00000568896 TRIM6Q9C030 488 aaPredicted RBP20.11■□□□□ 0.81
SYNGR3-205ENST00000568896 SCAND2PQ9GZW5 306 aaPredicted RBP20.11■□□□□ 0.81
SYNGR3-205ENST00000568896 NXF3Q9H4D5 531 aaKnown RBP20.11■□□□□ 0.81
SYNGR3-205ENST00000568896 ZHX3Q9H4I2 956 aa20.11■□□□□ 0.81
SYNGR3-205ENST00000568896 RSAD1Q9HA92 442 aa20.11■□□□□ 0.81
SYNGR3-205ENST00000568896 FAM13BQ9NYF5 915 aa20.11■□□□□ 0.81
SYNGR3-205ENST00000568896 SPG21Q9NZD8 308 aa20.11■□□□□ 0.81
SYNGR3-205ENST00000568896 KCNG1Q9UIX4 513 aa20.11■□□□□ 0.81
SYNGR3-205ENST00000568896 HES2Q9Y543 173 aa20.11■□□□□ 0.81
SYNGR3-205ENST00000568896 NT5C1B-RDH14C9J2C7 533 aa20.1■□□□□ 0.81
SYNGR3-205ENST00000568896 MAPTP10636 758 aaKnown RBP20.1■□□□□ 0.81
SYNGR3-205ENST00000568896 ITGA4P13612 1032 aa20.1■□□□□ 0.81
SYNGR3-205ENST00000568896 VCPP55072 806 aaKnown RBP20.1■□□□□ 0.81
SYNGR3-205ENST00000568896 KRT17Q04695 432 aa20.1■□□□□ 0.81
SYNGR3-205ENST00000568896 ATF7IP2Q5U623 682 aa20.1■□□□□ 0.81
SYNGR3-205ENST00000568896 SLC39A11Q8N1S5 342 aa20.1■□□□□ 0.81
SYNGR3-205ENST00000568896 FBXL6Q8N531 539 aa20.1■□□□□ 0.81
SYNGR3-205ENST00000568896 MYCT1Q8N699 235 aa20.1■□□□□ 0.81
SYNGR3-205ENST00000568896 IQUBQ8NA54 791 aa20.1■□□□□ 0.81
SYNGR3-205ENST00000568896 RSPH1Q8WYR4 309 aa20.1■□□□□ 0.81
SYNGR3-205ENST00000568896 DNAJC19Q96DA6 116 aa20.1■□□□□ 0.81
SYNGR3-205ENST00000568896 ASIC4Q96FT7 647 aa20.1■□□□□ 0.81
SYNGR3-205ENST00000568896 MRPL9Q9BYD2 267 aaKnown RBP20.1■□□□□ 0.81
SYNGR3-205ENST00000568896 RNF39Q9H2S5 420 aa20.1■□□□□ 0.81
SYNGR3-205ENST00000568896 CUEDC2Q9H467 287 aa20.1■□□□□ 0.81
SYNGR3-205ENST00000568896 INPP5FQ9Y2H2 1132 aa20.1■□□□□ 0.81
SYNGR3-205ENST00000568896 FSD2A1L4K1 749 aa20.09■□□□□ 0.81
SYNGR3-205ENST00000568896 POLR2DO15514 142 aaKnown RBP20.09■□□□□ 0.81
SYNGR3-205ENST00000568896 OFD1O75665 1012 aa20.09■□□□□ 0.81
SYNGR3-205ENST00000568896 SRGAP2BP0DMP2 458 aa20.09■□□□□ 0.81
SYNGR3-205ENST00000568896 TCF15Q12870 199 aa20.09■□□□□ 0.81
SYNGR3-205ENST00000568896 PTPN21Q16825 1174 aa20.09■□□□□ 0.81
SYNGR3-205ENST00000568896 NOMO2Q5JPE7 1267 aa20.09■□□□□ 0.81
SYNGR3-205ENST00000568896 ADALQ6DHV7 355 aa20.09■□□□□ 0.81
SYNGR3-205ENST00000568896 MRPL43Q8N983 215 aaKnown RBP20.09■□□□□ 0.81
SYNGR3-205ENST00000568896 KCNN1Q92952 543 aa20.09■□□□□ 0.81
SYNGR3-205ENST00000568896 FIZ1Q96SL8 496 aa20.09■□□□□ 0.81
SYNGR3-205ENST00000568896 ACO2Q99798 780 aaKnown RBP20.09■□□□□ 0.81
SYNGR3-205ENST00000568896 ADPGKQ9BRR6 497 aa20.09■□□□□ 0.81
SYNGR3-205ENST00000568896 TARS2Q9BW92 718 aaKnown RBP20.09■□□□□ 0.81
SYNGR3-205ENST00000568896 APOL6Q9BWW8 343 aa20.09■□□□□ 0.81
SYNGR3-205ENST00000568896 MRPL4Q9BYD3 311 aaKnown RBP20.09■□□□□ 0.81
SYNGR3-205ENST00000568896 TNMDQ9H2S6 317 aa20.09■□□□□ 0.81
SYNGR3-205ENST00000568896 GDPD2Q9HCC8 539 aa20.09■□□□□ 0.81
SYNGR3-205ENST00000568896 C2orf71A6NGG8 1288 aa20.08■□□□□ 0.81
SYNGR3-205ENST00000568896 H0YCG3 227 aa20.08■□□□□ 0.81
SYNGR3-205ENST00000568896 K7ENM7 598 aa20.08■□□□□ 0.81
SYNGR3-205ENST00000568896 TRAK2O60296 914 aa20.08■□□□□ 0.81
SYNGR3-205ENST00000568896 PPM1AP35813 382 aa20.08■□□□□ 0.81
SYNGR3-205ENST00000568896 AFF1P51825 1210 aaKnown RBP20.08■□□□□ 0.81
SYNGR3-205ENST00000568896 STRN3Q13033 797 aa20.08■□□□□ 0.81
SYNGR3-205ENST00000568896 HAUS6Q7Z4H7 955 aa20.08■□□□□ 0.81
SYNGR3-205ENST00000568896 SFR1Q86XK3 245 aa20.08■□□□□ 0.81
SYNGR3-205ENST00000568896 HACE1Q8IYU2 909 aa20.08■□□□□ 0.81
SYNGR3-205ENST00000568896 STAMQ92783 540 aa20.08■□□□□ 0.81
SYNGR3-205ENST00000568896 TSHZ2Q9NRE2 1034 aa20.08■□□□□ 0.81
SYNGR3-205ENST00000568896 KBTBD4Q9NVX7 518 aa20.08■□□□□ 0.81
SYNGR3-205ENST00000568896 KCNH3Q9ULD8 1083 aa20.08■□□□□ 0.81
SYNGR3-205ENST00000568896 CIZ1Q9ULV3 898 aaPredicted RBP20.08■□□□□ 0.81
SYNGR3-205ENST00000568896 TNFSF13BQ9Y275 285 aa20.08■□□□□ 0.81
SYNGR3-205ENST00000568896 HCFC2Q9Y5Z7 792 aa20.08■□□□□ 0.81
SYNGR3-205ENST00000568896 ZDBF2Q9HCK1 2354 aa20.07■□□□□ 0.8
SYNGR3-205ENST00000568896 MYH11P35749 1972 aa20.07■□□□□ 0.8
SYNGR3-205ENST00000568896 CLASP2O75122 1294 aaKnown RBP20.07■□□□□ 0.8
SYNGR3-205ENST00000568896 PDGFBP01127 241 aaPredicted RBP20.07■□□□□ 0.8
SYNGR3-205ENST00000568896 HOXB8P17481 243 aaPredicted RBP20.07■□□□□ 0.8
SYNGR3-205ENST00000568896 CMA1P23946 247 aa20.07■□□□□ 0.8
SYNGR3-205ENST00000568896 PTPN5P54829 565 aa20.07■□□□□ 0.8
SYNGR3-205ENST00000568896 BCAR1P56945 870 aa20.07■□□□□ 0.8
SYNGR3-205ENST00000568896 SMC1AQ14683 1233 aaKnown RBP20.07■□□□□ 0.8
SYNGR3-205ENST00000568896 DCAF4L1Q3SXM0 396 aa20.07■□□□□ 0.8
SYNGR3-205ENST00000568896 KANK3Q6NY19 840 aa20.07■□□□□ 0.8
SYNGR3-205ENST00000568896 URGCPQ8TCY9 931 aa20.07■□□□□ 0.8
SYNGR3-205ENST00000568896 CASP10Q92851 521 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms