RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 MCM6Q14566 821 aa27.67■■■□□ 2.02
FANCA-228ENST00000567943 ATF7IP2Q5U623 682 aa27.67■■■□□ 2.02
FANCA-228ENST00000567943 ANKRD54Q6NXT1 300 aa27.67■■■□□ 2.02
FANCA-228ENST00000567943 GPBP1Q86WP2 473 aa27.67■■■□□ 2.02
FANCA-228ENST00000567943 LINC00301Q8NCQ3 95 aa27.67■■■□□ 2.02
FANCA-228ENST00000567943 NTPCRQ9BSD7 190 aaKnown RBP27.67■■■□□ 2.02
FANCA-228ENST00000567943 TMEM134Q9H6X4 195 aa27.67■■■□□ 2.02
FANCA-228ENST00000567943 PTPRHQ9HD43 1115 aa27.67■■■□□ 2.02
FANCA-228ENST00000567943 TXLNAP40222 546 aa27.66■■■□□ 2.02
FANCA-228ENST00000567943 GRIK3Q13003 919 aa27.66■■■□□ 2.02
FANCA-228ENST00000567943 SUSD6Q92537 303 aa27.66■■■□□ 2.02
FANCA-228ENST00000567943 RABGGTAQ92696 567 aa27.66■■■□□ 2.02
FANCA-228ENST00000567943 ACO2Q99798 780 aaKnown RBP27.66■■■□□ 2.02
FANCA-228ENST00000567943 CCDC39Q9UFE4 941 aa27.66■■■□□ 2.02
FANCA-228ENST00000567943 PHLPP2Q6ZVD8 1323 aa27.66■■■□□ 2.02
FANCA-228ENST00000567943 SLC16A4O15374 487 aa27.65■■■□□ 2.02
FANCA-228ENST00000567943 PLS3P13797 630 aa27.65■■■□□ 2.02
FANCA-228ENST00000567943 SSTR3P32745 418 aaPredicted RBP27.65■■■□□ 2.02
FANCA-228ENST00000567943 NAB2Q15742 525 aa27.65■■■□□ 2.02
FANCA-228ENST00000567943 LARP4BQ92615 738 aaKnown RBP27.65■■■□□ 2.02
FANCA-228ENST00000567943 PAAF1Q9BRP4 392 aa27.65■■■□□ 2.02
FANCA-228ENST00000567943 ADPGKQ9BRR6 497 aa27.65■■■□□ 2.02
FANCA-228ENST00000567943 TNFSF13BQ9Y275 285 aa27.65■■■□□ 2.02
FANCA-228ENST00000567943 RBM19Q9Y4C8 960 aaKnown RBP27.65■■■□□ 2.02
FANCA-228ENST00000567943 ABLIM1O14639 778 aa27.64■■■□□ 2.02
FANCA-228ENST00000567943 SPTLC2O15270 562 aa27.64■■■□□ 2.02
FANCA-228ENST00000567943 CA8P35219 290 aa27.64■■■□□ 2.02
FANCA-228ENST00000567943 SLC22A17Q8WUG5 538 aa27.64■■■□□ 2.02
FANCA-228ENST00000567943 SPIRE2Q8WWL2 714 aa27.64■■■□□ 2.02
FANCA-228ENST00000567943 REEP2Q9BRK0 252 aa27.64■■■□□ 2.02
FANCA-228ENST00000567943 CDH22Q9UJ99 828 aa27.64■■■□□ 2.02
FANCA-228ENST00000567943 GDAQ9Y2T3 454 aa27.64■■■□□ 2.02
FANCA-228ENST00000567943 SOD2P04179 222 aa27.63■■■□□ 2.01
FANCA-228ENST00000567943 DDIT3P35638 169 aa27.63■■■□□ 2.01
FANCA-228ENST00000567943 GIT2Q14161 759 aa27.63■■■□□ 2.01
FANCA-228ENST00000567943 BMS1Q14692 1282 aaKnown RBP27.63■■■□□ 2.01
FANCA-228ENST00000567943 DCAF4L1Q3SXM0 396 aa27.63■■■□□ 2.01
FANCA-228ENST00000567943 CEP120Q8N960 986 aa27.63■■■□□ 2.01
FANCA-228ENST00000567943 TMEM161BQ8NDZ6 487 aa27.63■■■□□ 2.01
FANCA-228ENST00000567943 TARS2Q9BW92 718 aaKnown RBP27.63■■■□□ 2.01
FANCA-228ENST00000567943 APOL5Q9BWW9 433 aa27.63■■■□□ 2.01
FANCA-228ENST00000567943 DAXXQ9UER7 740 aaPredicted RBP27.63■■■□□ 2.01
FANCA-228ENST00000567943 KCNG1Q9UIX4 513 aa27.63■■■□□ 2.01
FANCA-228ENST00000567943 ODF2LQ9ULJ1 636 aa27.63■■■□□ 2.01
FANCA-228ENST00000567943 PLXNA3P51805 1871 aa27.62■■■□□ 2.01
FANCA-228ENST00000567943 PI4K2BG5E9Z4 385 aa27.62■■■□□ 2.01
FANCA-228ENST00000567943 YEATS4O95619 227 aa27.62■■■□□ 2.01
FANCA-228ENST00000567943 KRT18P05783 430 aaKnown RBP27.62■■■□□ 2.01
FANCA-228ENST00000567943 CNPP09543 421 aaKnown RBP27.62■■■□□ 2.01
FANCA-228ENST00000567943 EPCAMP16422 314 aa27.62■■■□□ 2.01
FANCA-228ENST00000567943 PROZP22891 400 aa27.62■■■□□ 2.01
FANCA-228ENST00000567943 SMTNP53814 917 aa27.62■■■□□ 2.01
FANCA-228ENST00000567943 RRAGBQ5VZM2 374 aa27.62■■■□□ 2.01
FANCA-228ENST00000567943 FEZF2Q8TBJ5 459 aa27.62■■■□□ 2.01
FANCA-228ENST00000567943 CASP10Q92851 521 aa27.62■■■□□ 2.01
FANCA-228ENST00000567943 KLHL5Q96PQ7 755 aa27.62■■■□□ 2.01
FANCA-228ENST00000567943 RPS6KC1Q96S38 1066 aa27.62■■■□□ 2.01
FANCA-228ENST00000567943 HERC2P3Q9BVR0 1158 aa27.62■■■□□ 2.01
FANCA-228ENST00000567943 GPR62Q9BZJ7 368 aa27.62■■■□□ 2.01
FANCA-228ENST00000567943 CDT1Q9H211 546 aa27.62■■■□□ 2.01
FANCA-228ENST00000567943 LARSQ9P2J5 1176 aaKnown RBP27.62■■■□□ 2.01
FANCA-228ENST00000567943 STK17AQ9UEE5 414 aa27.62■■■□□ 2.01
FANCA-228ENST00000567943 STK39Q9UEW8 545 aa27.62■■■□□ 2.01
FANCA-228ENST00000567943 PPP6R2O75170 966 aa27.61■■■□□ 2.01
FANCA-228ENST00000567943 SRGAP2BP0DMP2 458 aa27.61■■■□□ 2.01
FANCA-228ENST00000567943 MAPTP10636 758 aaKnown RBP27.61■■■□□ 2.01
FANCA-228ENST00000567943 KIAA0319Q5VV43 1072 aa27.61■■■□□ 2.01
FANCA-228ENST00000567943 MRPL4Q9BYD3 311 aaKnown RBP27.61■■■□□ 2.01
FANCA-228ENST00000567943 C11orf16Q9NQ32 467 aa27.61■■■□□ 2.01
FANCA-228ENST00000567943 CITO14578 2027 aa27.6■■■□□ 2.01
FANCA-228ENST00000567943 FAM13AO94988 1023 aa27.6■■■□□ 2.01
FANCA-228ENST00000567943 HOXB8P17481 243 aaPredicted RBP27.6■■■□□ 2.01
FANCA-228ENST00000567943 TUSC3Q13454 348 aa27.6■■■□□ 2.01
FANCA-228ENST00000567943 KANK3Q6NY19 840 aa27.6■■■□□ 2.01
FANCA-228ENST00000567943 B3GALT6Q96L58 329 aa27.6■■■□□ 2.01
FANCA-228ENST00000567943 COLEC11Q9BWP8 271 aa27.6■■■□□ 2.01
FANCA-228ENST00000567943 PANK2Q9BZ23 570 aa27.6■■■□□ 2.01
FANCA-228ENST00000567943 CHST7Q9NS84 486 aa27.6■■■□□ 2.01
FANCA-228ENST00000567943 CASTOR2A6NHX0 329 aa27.59■■■□□ 2.01
FANCA-228ENST00000567943 C2CD2LO14523 706 aa27.59■■■□□ 2.01
FANCA-228ENST00000567943 THP07101 528 aa27.59■■■□□ 2.01
FANCA-228ENST00000567943 IGFBP6P24592 240 aaPredicted RBP27.59■■■□□ 2.01
FANCA-228ENST00000567943 FUT10Q6P4F1 479 aa27.59■■■□□ 2.01
FANCA-228ENST00000567943 CCDC73Q6ZRK6 1079 aa27.59■■■□□ 2.01
FANCA-228ENST00000567943 MYCT1Q8N699 235 aa27.59■■■□□ 2.01
FANCA-228ENST00000567943 C12orf76Q8N812 135 aaPredicted RBP27.59■■■□□ 2.01
FANCA-228ENST00000567943 ZBTB45Q96K62 511 aaPredicted RBP27.59■■■□□ 2.01
FANCA-228ENST00000567943 ZHX3Q9H4I2 956 aa27.59■■■□□ 2.01
FANCA-228ENST00000567943 MRPL17Q9NRX2 175 aaKnown RBP27.59■■■□□ 2.01
FANCA-228ENST00000567943 ADAM28Q9UKQ2 775 aa27.59■■■□□ 2.01
FANCA-228ENST00000567943 VWA8A3KMH1 1905 aa27.59■■■□□ 2.01
FANCA-228ENST00000567943 LOC730098B7Z3J9 87 aa27.58■■■□□ 2.01
FANCA-228ENST00000567943 MEFVO15553 781 aaPredicted RBP27.58■■■□□ 2.01
FANCA-228ENST00000567943 NR1I2O75469 434 aa27.58■■■□□ 2.01
FANCA-228ENST00000567943 BRD1O95696 1058 aa27.58■■■□□ 2.01
FANCA-228ENST00000567943 GRM5P41594 1212 aa27.58■■■□□ 2.01
FANCA-228ENST00000567943 CLCN4P51793 760 aa27.58■■■□□ 2.01
FANCA-228ENST00000567943 DSG1Q02413 1049 aa27.58■■■□□ 2.01
FANCA-228ENST00000567943 STRN3Q13033 797 aa27.58■■■□□ 2.01
FANCA-228ENST00000567943 HSP90AA2PQ14568 343 aaPredicted RBP27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms