RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 ATF7IP2Q5U623 682 aa13.47□□□□□ -0.25
GTF3C1-208ENST00000567843 DAW1Q8N136 415 aa13.47□□□□□ -0.25
GTF3C1-208ENST00000567843 CEP120Q8N960 986 aa13.47□□□□□ -0.25
GTF3C1-208ENST00000567843 KREMEN2Q8NCW0 462 aa13.47□□□□□ -0.25
GTF3C1-208ENST00000567843 RIN2Q8WYP3 895 aaPredicted RBP13.47□□□□□ -0.25
GTF3C1-208ENST00000567843 KIFAP3Q92845 792 aa13.47□□□□□ -0.25
GTF3C1-208ENST00000567843 NECTIN4Q96NY8 510 aa13.47□□□□□ -0.25
GTF3C1-208ENST00000567843 ADPGKQ9BRR6 497 aa13.47□□□□□ -0.25
GTF3C1-208ENST00000567843 RAB34Q9BZG1 259 aa13.47□□□□□ -0.25
GTF3C1-208ENST00000567843 MAN1C1Q9NR34 630 aa13.47□□□□□ -0.25
GTF3C1-208ENST00000567843 LIMD1Q9UGP4 676 aa13.47□□□□□ -0.25
GTF3C1-208ENST00000567843 ADAM28Q9UKQ2 775 aa13.47□□□□□ -0.25
GTF3C1-208ENST00000567843 SMC3Q9UQE7 1217 aa13.47□□□□□ -0.25
GTF3C1-208ENST00000567843 NR2E1Q9Y466 385 aa13.47□□□□□ -0.25
GTF3C1-208ENST00000567843 K7ERI5 159 aa13.46□□□□□ -0.25
GTF3C1-208ENST00000567843 KIF4AO95239 1232 aa13.46□□□□□ -0.25
GTF3C1-208ENST00000567843 EFEMP2O95967 443 aa13.46□□□□□ -0.25
GTF3C1-208ENST00000567843 PDGFBP01127 241 aaPredicted RBP13.46□□□□□ -0.25
GTF3C1-208ENST00000567843 ADH1AP07327 375 aa13.46□□□□□ -0.25
GTF3C1-208ENST00000567843 NPTX2P47972 431 aa13.46□□□□□ -0.25
GTF3C1-208ENST00000567843 CACNB1Q02641 598 aaPredicted RBP13.46□□□□□ -0.25
GTF3C1-208ENST00000567843 TUSC3Q13454 348 aa13.46□□□□□ -0.25
GTF3C1-208ENST00000567843 HSP90AA2PQ14568 343 aaPredicted RBP13.46□□□□□ -0.25
GTF3C1-208ENST00000567843 RILPL1Q5EBL4 403 aa13.46□□□□□ -0.25
GTF3C1-208ENST00000567843 RINT1Q6NUQ1 792 aa13.46□□□□□ -0.25
GTF3C1-208ENST00000567843 PRSS55Q6UWB4 352 aaPredicted RBP13.46□□□□□ -0.25
GTF3C1-208ENST00000567843 GPR149Q86SP6 731 aa13.46□□□□□ -0.25
GTF3C1-208ENST00000567843 CEP57Q86XR8 500 aa13.46□□□□□ -0.25
GTF3C1-208ENST00000567843 RNF168Q8IYW5 571 aaPredicted RBP13.46□□□□□ -0.25
GTF3C1-208ENST00000567843 TDRD5Q8NAT2 981 aaKnown RBP13.46□□□□□ -0.25
GTF3C1-208ENST00000567843 MFSD14AQ96MC6 490 aa13.46□□□□□ -0.25
GTF3C1-208ENST00000567843 PNMA5Q96PV4 448 aa13.46□□□□□ -0.25
GTF3C1-208ENST00000567843 SFXN1Q9H9B4 322 aa13.46□□□□□ -0.25
GTF3C1-208ENST00000567843 PIEZO1Q92508 2521 aa13.46□□□□□ -0.26
GTF3C1-208ENST00000567843 MYO10Q9HD67 2058 aa13.46□□□□□ -0.26
GTF3C1-208ENST00000567843 NPHP3-ACAD11A0A0J9YXS1 232 aa13.45□□□□□ -0.26
GTF3C1-208ENST00000567843 LAD1O00515 517 aa13.45□□□□□ -0.26
GTF3C1-208ENST00000567843 SLC16A4O15374 487 aa13.45□□□□□ -0.26
GTF3C1-208ENST00000567843 GLUD1P00367 558 aa13.45□□□□□ -0.26
GTF3C1-208ENST00000567843 THP07101 528 aa13.45□□□□□ -0.26
GTF3C1-208ENST00000567843 HARSP12081 509 aaKnown RBP13.45□□□□□ -0.26
GTF3C1-208ENST00000567843 PRPHP41219 470 aa13.45□□□□□ -0.26
GTF3C1-208ENST00000567843 EFNA5P52803 228 aa13.45□□□□□ -0.26
GTF3C1-208ENST00000567843 ATP2C1P98194 919 aaPredicted RBP13.45□□□□□ -0.26
GTF3C1-208ENST00000567843 DSG1Q02413 1049 aa13.45□□□□□ -0.26
GTF3C1-208ENST00000567843 SIGLEC14Q08ET2 396 aa13.45□□□□□ -0.26
GTF3C1-208ENST00000567843 MAPK7Q13164 816 aa13.45□□□□□ -0.26
GTF3C1-208ENST00000567843 USP41Q3LFD5 358 aa13.45□□□□□ -0.26
GTF3C1-208ENST00000567843 RTP2Q5QGT7 225 aa13.45□□□□□ -0.26
GTF3C1-208ENST00000567843 FAM171A1Q5VUB5 890 aa13.45□□□□□ -0.26
GTF3C1-208ENST00000567843 LARP1BQ659C4 914 aaKnown RBP13.45□□□□□ -0.26
GTF3C1-208ENST00000567843 TBC1D32Q96NH3 1257 aa13.45□□□□□ -0.26
GTF3C1-208ENST00000567843 TARS2Q9BW92 718 aaKnown RBP13.45□□□□□ -0.26
GTF3C1-208ENST00000567843 RXFP1Q9HBX9 757 aa13.45□□□□□ -0.26
GTF3C1-208ENST00000567843 KMT5AQ9NQR1 393 aa13.45□□□□□ -0.26
GTF3C1-208ENST00000567843 CHST7Q9NS84 486 aa13.45□□□□□ -0.26
GTF3C1-208ENST00000567843 SSX2IPQ9Y2D8 614 aa13.45□□□□□ -0.26
GTF3C1-208ENST00000567843 ZNF318Q5VUA4 2279 aa13.44□□□□□ -0.26
GTF3C1-208ENST00000567843 CCDC195A0A1B0GUA6 201 aa13.44□□□□□ -0.26
GTF3C1-208ENST00000567843 TGM5O43548 720 aa13.44□□□□□ -0.26
GTF3C1-208ENST00000567843 BRD1O95696 1058 aa13.44□□□□□ -0.26
GTF3C1-208ENST00000567843 DHX8Q14562 1220 aaKnown RBP13.44□□□□□ -0.26
GTF3C1-208ENST00000567843 NAB2Q15742 525 aa13.44□□□□□ -0.26
GTF3C1-208ENST00000567843 IER5LQ5T953 404 aa13.44□□□□□ -0.26
GTF3C1-208ENST00000567843 C1orf186Q6ZWK4 172 aa13.44□□□□□ -0.26
GTF3C1-208ENST00000567843 TAS1R3Q7RTX0 852 aa13.44□□□□□ -0.26
GTF3C1-208ENST00000567843 ST13P5Q8NFI4 369 aaPredicted RBP13.44□□□□□ -0.26
GTF3C1-208ENST00000567843 TCHPQ9BT92 498 aa13.44□□□□□ -0.26
GTF3C1-208ENST00000567843 CDT1Q9H211 546 aa13.44□□□□□ -0.26
GTF3C1-208ENST00000567843 GOLGA2P5Q9HBQ8 144 aa13.44□□□□□ -0.26
GTF3C1-208ENST00000567843 STK39Q9UEW8 545 aa13.44□□□□□ -0.26
GTF3C1-208ENST00000567843 STK24Q9Y6E0 443 aa13.44□□□□□ -0.26
GTF3C1-208ENST00000567843 I3L4J1 428 aa13.43□□□□□ -0.26
GTF3C1-208ENST00000567843 VCPP55072 806 aaKnown RBP13.43□□□□□ -0.26
GTF3C1-208ENST00000567843 GRIN1Q05586 938 aa13.43□□□□□ -0.26
GTF3C1-208ENST00000567843 DMP1Q13316 513 aaPredicted RBP13.43□□□□□ -0.26
GTF3C1-208ENST00000567843 DCAF4L1Q3SXM0 396 aa13.43□□□□□ -0.26
GTF3C1-208ENST00000567843 ZNF568Q3ZCX4 644 aa13.43□□□□□ -0.26
GTF3C1-208ENST00000567843 SEZ6Q53EL9 994 aa13.43□□□□□ -0.26
GTF3C1-208ENST00000567843 CCDC149Q6ZUS6 474 aa13.43□□□□□ -0.26
GTF3C1-208ENST00000567843 SUGP1Q8IWZ8 645 aaKnown RBP13.43□□□□□ -0.26
GTF3C1-208ENST00000567843 FBXL6Q8N531 539 aa13.43□□□□□ -0.26
GTF3C1-208ENST00000567843 SMG7Q92540 1137 aaKnown RBP13.43□□□□□ -0.26
GTF3C1-208ENST00000567843 ASIC4Q96FT7 647 aa13.43□□□□□ -0.26
GTF3C1-208ENST00000567843 CDK5RAP3Q96JB5 506 aa13.43□□□□□ -0.26
GTF3C1-208ENST00000567843 ZBTB45Q96K62 511 aaPredicted RBP13.43□□□□□ -0.26
GTF3C1-208ENST00000567843 ACO2Q99798 780 aaKnown RBP13.43□□□□□ -0.26
GTF3C1-208ENST00000567843 SORCS3Q9UPU3 1222 aa13.43□□□□□ -0.26
GTF3C1-208ENST00000567843 TNFSF13BQ9Y275 285 aa13.43□□□□□ -0.26
GTF3C1-208ENST00000567843 TDRD15B5MCY1 1934 aaKnown RBP13.43□□□□□ -0.26
GTF3C1-208ENST00000567843 SF3B1O75533 1304 aaKnown RBP eCLIP13.42□□□□□ -0.26
GTF3C1-208ENST00000567843 VPS37CA5D8V6 355 aaPredicted RBP13.42□□□□□ -0.26
GTF3C1-208ENST00000567843 ADAM12O43184 909 aa13.42□□□□□ -0.26
GTF3C1-208ENST00000567843 PLA2G4BP0C869 781 aa13.42□□□□□ -0.26
GTF3C1-208ENST00000567843 GBP2P32456 591 aaPredicted RBP13.42□□□□□ -0.26
GTF3C1-208ENST00000567843 CLCNKBP51801 687 aa13.42□□□□□ -0.26
GTF3C1-208ENST00000567843 SOX4Q06945 474 aaPredicted RBP13.42□□□□□ -0.26
GTF3C1-208ENST00000567843 MTMR3Q13615 1198 aa13.42□□□□□ -0.26
GTF3C1-208ENST00000567843 BMP8AQ7Z5Y6 402 aa13.42□□□□□ -0.26
GTF3C1-208ENST00000567843 TMEM130Q8N3G9 435 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms