RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 SIT1Q9Y3P8 196 aa17.22■□□□□ 0.35
PALB2-205ENST00000567003 NR1I2O75469 434 aa17.21■□□□□ 0.35
PALB2-205ENST00000567003 ZMYND10O75800 440 aa17.21■□□□□ 0.35
PALB2-205ENST00000567003 GCFC2P16383 781 aaKnown RBP17.21■□□□□ 0.35
PALB2-205ENST00000567003 GLRA2P23416 452 aa17.21■□□□□ 0.35
PALB2-205ENST00000567003 FSHRP23945 695 aa17.21■□□□□ 0.35
PALB2-205ENST00000567003 PHLDB3Q6NSJ2 640 aa17.21■□□□□ 0.35
PALB2-205ENST00000567003 PARM1Q6UWI2 310 aa17.21■□□□□ 0.35
PALB2-205ENST00000567003 C1orf210Q8IVY1 113 aa17.21■□□□□ 0.35
PALB2-205ENST00000567003 NXPE3Q969Y0 559 aa17.21■□□□□ 0.35
PALB2-205ENST00000567003 CXCL16Q9H2A7 254 aa17.21■□□□□ 0.35
PALB2-205ENST00000567003 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.21■□□□□ 0.35
PALB2-205ENST00000567003 FNIP2Q9P278 1114 aa17.21■□□□□ 0.35
PALB2-205ENST00000567003 CYP46A1Q9Y6A2 500 aa17.21■□□□□ 0.35
PALB2-205ENST00000567003 VWA8A3KMH1 1905 aa17.2■□□□□ 0.34
PALB2-205ENST00000567003 SPTBN2O15020 2390 aa17.2■□□□□ 0.34
PALB2-205ENST00000567003 CASTOR2A6NHX0 329 aa17.2■□□□□ 0.34
PALB2-205ENST00000567003 CCL16O15467 120 aa17.2■□□□□ 0.34
PALB2-205ENST00000567003 ADAM12O43184 909 aa17.2■□□□□ 0.34
PALB2-205ENST00000567003 TADA2AO75478 443 aa17.2■□□□□ 0.34
PALB2-205ENST00000567003 SLITRK3O94933 977 aa17.2■□□□□ 0.34
PALB2-205ENST00000567003 ARL2P36404 184 aa17.2■□□□□ 0.34
PALB2-205ENST00000567003 GPC5P78333 572 aa17.2■□□□□ 0.34
PALB2-205ENST00000567003 SCRN1Q12765 414 aa17.2■□□□□ 0.34
PALB2-205ENST00000567003 GRIK3Q13003 919 aa17.2■□□□□ 0.34
PALB2-205ENST00000567003 TFDP1Q14186 410 aa17.2■□□□□ 0.34
PALB2-205ENST00000567003 MXD4Q14582 209 aaPredicted RBP17.2■□□□□ 0.34
PALB2-205ENST00000567003 CPLX2Q6PUV4 134 aaKnown RBP17.2■□□□□ 0.34
PALB2-205ENST00000567003 IFNLR1Q8IU57 520 aaPredicted RBP17.2■□□□□ 0.34
PALB2-205ENST00000567003 PJA1Q8NG27 643 aa17.2■□□□□ 0.34
PALB2-205ENST00000567003 EIF2AK1Q9BQI3 630 aaKnown RBP17.2■□□□□ 0.34
PALB2-205ENST00000567003 POLR3FQ9H1D9 316 aaPredicted RBP17.2■□□□□ 0.34
PALB2-205ENST00000567003 SLC2A4RGQ9NR83 387 aa17.2■□□□□ 0.34
PALB2-205ENST00000567003 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.2■□□□□ 0.34
PALB2-205ENST00000567003 FBXW11Q9UKB1 542 aa17.2■□□□□ 0.34
PALB2-205ENST00000567003 TBX3O15119 743 aa17.19■□□□□ 0.34
PALB2-205ENST00000567003 NCBP1Q09161 790 aaKnown RBP17.19■□□□□ 0.34
PALB2-205ENST00000567003 SNW1Q13573 536 aaKnown RBP17.19■□□□□ 0.34
PALB2-205ENST00000567003 HSP90AA2PQ14568 343 aaPredicted RBP17.19■□□□□ 0.34
PALB2-205ENST00000567003 MAEAQ7L5Y9 396 aa17.19■□□□□ 0.34
PALB2-205ENST00000567003 DGLUCYQ7Z3D6 616 aa17.19■□□□□ 0.34
PALB2-205ENST00000567003 HACE1Q8IYU2 909 aa17.19■□□□□ 0.34
PALB2-205ENST00000567003 MAML2Q8IZL2 1156 aaPredicted RBP17.19■□□□□ 0.34
PALB2-205ENST00000567003 SEMA4AQ9H3S1 761 aa17.19■□□□□ 0.34
PALB2-205ENST00000567003 GPRC5CQ9NQ84 441 aa17.19■□□□□ 0.34
PALB2-205ENST00000567003 NOTCH4Q99466 2003 aa17.18■□□□□ 0.34
PALB2-205ENST00000567003 TTLL13PA6NNM8 815 aa17.18■□□□□ 0.34
PALB2-205ENST00000567003 USO1O60763 962 aaKnown RBP17.18■□□□□ 0.34
PALB2-205ENST00000567003 REC8O95072 547 aa17.18■□□□□ 0.34
PALB2-205ENST00000567003 KIF4AO95239 1232 aa17.18■□□□□ 0.34
PALB2-205ENST00000567003 NR5A1Q13285 461 aa17.18■□□□□ 0.34
PALB2-205ENST00000567003 PCBP1Q15365 356 aaKnown RBP eCLIP17.18■□□□□ 0.34
PALB2-205ENST00000567003 SLC27A1Q6PCB7 646 aa17.18■□□□□ 0.34
PALB2-205ENST00000567003 CEP57Q86XR8 500 aa17.18■□□□□ 0.34
PALB2-205ENST00000567003 FAM177A1Q8N128 213 aaPredicted RBP17.18■□□□□ 0.34
PALB2-205ENST00000567003 ITFG1Q8TB96 612 aa17.18■□□□□ 0.34
PALB2-205ENST00000567003 PIGOQ8TEQ8 1089 aa17.18■□□□□ 0.34
PALB2-205ENST00000567003 CLSTN3Q9BQT9 956 aa17.18■□□□□ 0.34
PALB2-205ENST00000567003 POLIQ9UNA4 740 aa17.18■□□□□ 0.34
PALB2-205ENST00000567003 USP20Q9Y2K6 914 aa17.18■□□□□ 0.34
PALB2-205ENST00000567003 MTF2Q9Y483 593 aaPredicted RBP17.18■□□□□ 0.34
PALB2-205ENST00000567003 PATJQ8NI35 1801 aa17.18■□□□□ 0.34
PALB2-205ENST00000567003 SF3B1O75533 1304 aaKnown RBP eCLIP17.18■□□□□ 0.34
PALB2-205ENST00000567003 WNT7AO00755 349 aa17.17■□□□□ 0.34
PALB2-205ENST00000567003 C8AP07357 584 aa17.17■□□□□ 0.34
PALB2-205ENST00000567003 IGFBP6P24592 240 aaPredicted RBP17.17■□□□□ 0.34
PALB2-205ENST00000567003 STARD6P59095 220 aa17.17■□□□□ 0.34
PALB2-205ENST00000567003 PSMD5Q16401 504 aa17.17■□□□□ 0.34
PALB2-205ENST00000567003 PPM1LQ5SGD2 360 aa17.17■□□□□ 0.34
PALB2-205ENST00000567003 FAM171A1Q5VUB5 890 aa17.17■□□□□ 0.34
PALB2-205ENST00000567003 ZC3H14Q6PJT7 736 aaKnown RBP17.17■□□□□ 0.34
PALB2-205ENST00000567003 LNX1Q8TBB1 728 aaPredicted RBP17.17■□□□□ 0.34
PALB2-205ENST00000567003 CCDC43Q96MW1 224 aaKnown RBP17.17■□□□□ 0.34
PALB2-205ENST00000567003 KXD1Q9BQD3 176 aa17.17■□□□□ 0.34
PALB2-205ENST00000567003 PDRG1Q9NUG6 133 aa17.17■□□□□ 0.34
PALB2-205ENST00000567003 HCFC1R1Q9NWW0 138 aa17.17■□□□□ 0.34
PALB2-205ENST00000567003 CDH7Q9ULB5 785 aa17.17■□□□□ 0.34
PALB2-205ENST00000567003 A0A1B0GUA9 196 aa17.16■□□□□ 0.34
PALB2-205ENST00000567003 LRRIQ4A6NIV6 560 aa17.16■□□□□ 0.34
PALB2-205ENST00000567003 PTGESO14684 152 aa17.16■□□□□ 0.34
PALB2-205ENST00000567003 DGAT1O75907 488 aa17.16■□□□□ 0.34
PALB2-205ENST00000567003 BAG4O95429 457 aaKnown RBP17.16■□□□□ 0.34
PALB2-205ENST00000567003 CTDNEP1O95476 244 aa17.16■□□□□ 0.34
PALB2-205ENST00000567003 C1RP00736 705 aa17.16■□□□□ 0.34
PALB2-205ENST00000567003 CD72P21854 359 aa17.16■□□□□ 0.34
PALB2-205ENST00000567003 RARRES1P49788 294 aa17.16■□□□□ 0.34
PALB2-205ENST00000567003 CREMQ03060 361 aa17.16■□□□□ 0.34
PALB2-205ENST00000567003 POU5F1BQ06416 359 aa17.16■□□□□ 0.34
PALB2-205ENST00000567003 TUSC3Q13454 348 aa17.16■□□□□ 0.34
PALB2-205ENST00000567003 LIN9Q5TKA1 542 aa17.16■□□□□ 0.34
PALB2-205ENST00000567003 GPR65Q8IYL9 337 aa17.16■□□□□ 0.34
PALB2-205ENST00000567003 SLFN12Q8IYM2 578 aa17.16■□□□□ 0.34
PALB2-205ENST00000567003 ING5Q8WYH8 240 aa17.16■□□□□ 0.34
PALB2-205ENST00000567003 RUBCNQ92622 972 aa17.16■□□□□ 0.34
PALB2-205ENST00000567003 FGF13Q92913 245 aa17.16■□□□□ 0.34
PALB2-205ENST00000567003 HSD17B14Q9BPX1 270 aa17.16■□□□□ 0.34
PALB2-205ENST00000567003 TTPALQ9BTX7 342 aa17.16■□□□□ 0.34
PALB2-205ENST00000567003 ANKEF1Q9NU02 776 aa17.16■□□□□ 0.34
PALB2-205ENST00000567003 SPATA6Q9NWH7 488 aaPredicted RBP17.16■□□□□ 0.34
PALB2-205ENST00000567003 SNTG2Q9NY99 539 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms