RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 SRGAP2CP0DJJ0 459 aa11.69□□□□□ -0.54
PDXDC1-214ENST00000566633 ADSSP30520 456 aa11.69□□□□□ -0.54
PDXDC1-214ENST00000566633 NOP2P46087 812 aaKnown RBP11.69□□□□□ -0.54
PDXDC1-214ENST00000566633 BFSP1Q12934 665 aa11.69□□□□□ -0.54
PDXDC1-214ENST00000566633 LAMC2Q13753 1193 aa11.69□□□□□ -0.54
PDXDC1-214ENST00000566633 DRAP1Q14919 205 aaPredicted RBP11.69□□□□□ -0.54
PDXDC1-214ENST00000566633 RPS6KA1Q15418 735 aa11.69□□□□□ -0.54
PDXDC1-214ENST00000566633 TAS1R3Q7RTX0 852 aa11.69□□□□□ -0.54
PDXDC1-214ENST00000566633 METTL13Q8N6R0 699 aa11.69□□□□□ -0.54
PDXDC1-214ENST00000566633 TPCN2Q8NHX9 752 aa11.69□□□□□ -0.54
PDXDC1-214ENST00000566633 INTS2Q9H0H0 1204 aaKnown RBP11.69□□□□□ -0.54
PDXDC1-214ENST00000566633 GJD2Q9UKL4 321 aa11.69□□□□□ -0.54
PDXDC1-214ENST00000566633 LOXHD1Q8IVV2 1947 aa11.69□□□□□ -0.54
PDXDC1-214ENST00000566633 CCDC66A2RUB6 948 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 KIF4AO95239 1232 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 CNGA1P29973 690 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 GGCXP38435 758 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 TM4SF4P48230 202 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 DLG4P78352 724 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 MKRN4PQ13434 485 aaPredicted RBP11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 ZNF467Q7Z7K2 595 aaPredicted RBP11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 SLFN11Q7Z7L1 901 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 LMO3Q8TAP4 145 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 LNX1Q8TBB1 728 aaPredicted RBP11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 ATP8B4Q8TF62 1192 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 PRPF31Q8WWY3 499 aaKnown RBP11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 BBXQ8WY36 941 aaPredicted RBP11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 IFT74Q96LB3 600 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 SYT11Q9BT88 431 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 TMEM206Q9H813 350 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 APEX2Q9UBZ4 518 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 TMEM59LQ9UK28 342 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 TRPM7Q96QT4 1865 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 MYH11P35749 1972 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 CA12O43570 354 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 RNF40O75150 1001 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 LGR5O75473 907 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 CSDE1O75534 798 aaKnown RBP11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 GLI1P08151 1106 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 EPHB4P54760 987 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 TNFAIP2Q03169 654 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 ALCAMQ13740 583 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 OLFML2BQ68BL8 750 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 EMBQ6PCB8 327 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 SND1Q7KZF4 910 aaKnown RBP eCLIP11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 PLPPR4Q7Z2D5 763 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 USP38Q8NB14 1042 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 OR6J1Q8NGC5 347 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 U2AF1L4Q8WU68 220 aaKnown RBP11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 TAF4BQ92750 862 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 FAM84AQ96KN4 292 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 NTPCRQ9BSD7 190 aaKnown RBP11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 TIPINQ9BVW5 301 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 GOLPH3Q9H4A6 298 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 SMARCAD1Q9H4L7 1026 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 GDF3Q9NR23 364 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 GABRQQ9UN88 632 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 DAAM1Q9Y4D1 1078 aa11.68□□□□□ -0.54
PDXDC1-214ENST00000566633 TTLL13PA6NNM8 815 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 KCNK3O14649 394 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 EDN1P05305 212 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 INSRRP14616 1297 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 ARL2P36404 184 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 PSMC4P43686 418 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 LMAN1P49257 510 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 CLCN3P51790 818 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 RNASE9P60153 205 aaKnown RBP11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 MYL7Q01449 175 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 DEFB115Q30KQ5 88 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 DUSP28Q4G0W2 176 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 PHLDB3Q6NSJ2 640 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 SLC39A4Q6P5W5 647 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 GLYCTKQ8IVS8 523 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 C12orf56Q8IXR9 622 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 IFT20Q8IY31 132 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 LMBR1Q8WVP7 490 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 BICD1Q96G01 975 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 ZBTB45Q96K62 511 aaPredicted RBP11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 PBKQ96KB5 322 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 HSPBP1Q9NZL4 362 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 PLXNB2O15031 1838 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 LOC102724159A0A0B4J2E5 919 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 RBM47A0AV96 593 aaKnown RBP11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 HNRNPDLO14979 420 aaKnown RBP11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 LRRN2O75325 713 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 MAFO75444 373 aaPredicted RBP11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 GALCP54803 685 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 PWP2Q15269 919 aaKnown RBP11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 INTS8Q75QN2 995 aaKnown RBP11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 RHPN2Q8IUC4 686 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 CBWD2Q8IUF1 395 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 PPTC7Q8NI37 304 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 RIN2Q8WYP3 895 aaPredicted RBP11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 CAVIN3Q969G5 261 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 CAPNS2Q96L46 248 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 KRT12Q99456 494 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 C16orf70Q9BSU1 422 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 ST6GALNAC4Q9H4F1 302 aa11.67□□□□□ -0.54
PDXDC1-214ENST00000566633 FAM204AQ9H8W3 233 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms